CN191730

Overview
NameCN191730
Unique NameCN191730
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length618
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN191730 vs. ExPASy Swiss-Prot
Match: MYPT1_MOUSE (Protein phosphatase 1 regulatory subunit 12A OS=Mus musculus GN=Ppp1r12a PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 5.087e-11
Identity = 38/100 (38.00%), Postives = 53/100 (53.00%), Query Frame = -1
Query:   85 KGASTNYCDQYGLTPLHVAAIKGHKHVVLLLIEFGADVECQDNEGHAPLHLAVEGGSTETVEVLLDNGANANARSKSGATPLYTAQAMGYDGISQLLMNR 384
            +GA  NY +  GLT LH A I  +  +V  L+E GA++   DNEG  PLH A   G  +  E L+  GA+  A +  G TPL  A+    + + Q  +NR
Sbjct:   62 RGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEFLIGQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNR 161          
BLAST of CN191730 vs. ExPASy Swiss-Prot
Match: MYPT1_HUMAN (Protein phosphatase 1 regulatory subunit 12A OS=Homo sapiens GN=PPP1R12A PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.087e-11
Identity = 38/100 (38.00%), Postives = 53/100 (53.00%), Query Frame = -1
Query:   85 KGASTNYCDQYGLTPLHVAAIKGHKHVVLLLIEFGADVECQDNEGHAPLHLAVEGGSTETVEVLLDNGANANARSKSGATPLYTAQAMGYDGISQLLMNR 384
            +GA  NY +  GLT LH A I  +  +V  L+E GA++   DNEG  PLH A   G  +  E L+  GA+  A +  G TPL  A+    + + Q  +NR
Sbjct:   62 RGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEFLIGQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNR 161          
BLAST of CN191730 vs. ExPASy Swiss-Prot
Match: ANR31_HUMAN (Ankyrin repeat domain-containing protein 31 OS=Homo sapiens GN=ANKRD31 PE=5 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 5.087e-11
Identity = 46/140 (32.86%), Postives = 71/140 (50.71%), Query Frame = -1
Query:   34 RGEAVL-TAARRXXXXXXXXXLDKGASTNYCDQYGLTPLHVAAIKGHKHVVLLLIEFGADVECQDNEGHAPLHLAVEGGSTETVEVLLDNGANANARSKSGATPLYTAQAMGYDGISQLLMNRGASASLPQSSMLASVLE 450
            RGE+ L  A RR         ++ GA  N  D  G TPLH A+ +G   +++ L++ GA V C++ +G  PLH AV     +  E+LL NGAN N + +   + L  A     + + +LL + GA  ++ +    A V E
Sbjct: 1154 RGESQLHLAVRRGNLPLVKALIESGADVNLNDNAGWTPLHEASNEGSIDIIVELLKAGAKVNCENIDGILPLHDAVANNHLKAAEILLQNGANPNQKDQKQKSALDEADD---EKMKELLRSYGAIETVNRDESDAIVNE 1290          
BLAST of CN191730 vs. ExPASy Swiss-Prot
Match: ANR10_CHICK (Ankyrin repeat domain-containing protein 10 OS=Gallus gallus GN=ANKRD10 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.087e-11
Identity = 35/99 (35.35%), Postives = 53/99 (53.54%), Query Frame = -1
Query:   88 GASTNYCD-QYGLTPLHVAAIKGHKHVVLLLIEFGADVECQDNEGHAPLHLAVEGGSTETVEVLLDNGANANARSKSGATPLYTAQAMGYDGISQLLMN 381
            GAS N    ++  TP H+AA  GH   +  LI+ GA++  QD  G  P+H A   GS +++  L+ +GA  + R+ SG T    A   G+   +Q L+N
Sbjct:   78 GASVNASTTRFAQTPAHIAAFGGHPQCLNWLIQVGANINKQDYVGETPIHKAARSGSVDSISALVAHGAQIDLRNASGLTAADLAHTQGFQECAQFLLN 176          
BLAST of CN191730 vs. ExPASy Swiss-Prot
Match: ANKH_CHRVI (Ankyrin homolog OS=Chromatium vinosum PE=4 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.087e-11
Identity = 53/177 (29.94%), Postives = 80/177 (45.20%), Query Frame = -1
Query:   34 SRMIVAVRAFDVARDKGHIEVLAVL-QRG-----------EAVLTAARRXXXXXXXXXLDKGASTNYCDQYGLTPLHVAAIKGHKHVVLLLIEFGADVECQDNEGHAPLHLAVEGGSTETVEVLLDNGANANARSKSGATPLYTAQAMGYDGISQLLMNRGASASLPQSSMLASVLE 528
            +R +        A + GHI + A+L +RG           +A++ A+R          L KGA     D+ G T L  AA KG   V+ LLIE GAD+E +D +G   L +A + G    VE L   GA  +A    G+T L  A   G+  + + L+  GA  +        +++E
Sbjct:   93 ARTVAGCTPLTFAAEAGHIGISALLLERGAHVHDRTRSGWDALMIASRHGITDMVEQLLFKGADPKAADREGRTALMQAASKGETGVLPLLIEGGADLEARDKQGATALLIAADQGQAGAVETLAGLGAQLDAVDALGSTALILAVGHGHVAMVERLLAMGADPNRQDRKGTTALME 269          
BLAST of CN191730 vs. ExPASy Swiss-Prot
Match: ASB7_PONAB (Ankyrin repeat and SOCS box protein 7 OS=Pongo abelii GN=ASB7 PE=2 SV=1)

HSP 1 Score: 51.6026 bits (122), Expect = 5.962e-11
Identity = 35/95 (36.84%), Postives = 51/95 (53.68%), Query Frame = -1
Query:   67 GLTPLHVAAIKGHKHVVLLLIEFGADVECQDNEGHAPLHLAVEGGSTETVEVLLDNGANANARSKSGATPLYTAQAMGYDGISQLLMNRGASASL 351
            G TPLHVAA  G    V LL+EF A+V+   ++G  PL LA+    +  V++LLD+  NAN   ++G    Y A         ++ + RGA  +L
Sbjct:  117 GWTPLHVAAHYGRDSFVRLLLEFKAEVDPLSDKGTTPLQLAIIRERSSCVKILLDH--NANIDIQNGFLLRY-AVIKSNHSYCRMFLQRGADTNL 208          

HSP 2 Score: 34.6538 bits (78), Expect = 5.962e-11
Identity = 23/67 (34.33%), Postives = 29/67 (43.28%), Query Frame = -3
Query:  416 DGKTALHKPAANGDRRMVEMLIEMEADPTIKDDRGRSCF*RCSRQGTY*SLGGFTARRSGADGSKTR 616
            +G T LH  AA G  R V + +E  ADPT+KD                  +GGFTA    A   + R
Sbjct:   46 NGWTLLHFSAARGKERCVRVFLEHGADPTVKD-----------------LIGGFTALHYAAMHGRAR 95          
BLAST of CN191730 vs. ExPASy Swiss-Prot
Match: ASB7_MOUSE (Ankyrin repeat and SOCS box protein 7 OS=Mus musculus GN=Asb7 PE=2 SV=1)

HSP 1 Score: 51.6026 bits (122), Expect = 5.962e-11
Identity = 35/95 (36.84%), Postives = 51/95 (53.68%), Query Frame = -1
Query:   67 GLTPLHVAAIKGHKHVVLLLIEFGADVECQDNEGHAPLHLAVEGGSTETVEVLLDNGANANARSKSGATPLYTAQAMGYDGISQLLMNRGASASL 351
            G TPLHVAA  G    V LL+EF A+V+   ++G  PL LA+    +  V++LLD+  NAN   ++G    Y A         ++ + RGA  +L
Sbjct:  117 GWTPLHVAAHYGRDSFVRLLLEFKAEVDPLSDKGTTPLQLAIIRERSSCVKILLDH--NANIDIQNGFLLRY-AVIKSNHSYCRMFLQRGADTNL 208          

HSP 2 Score: 34.6538 bits (78), Expect = 5.962e-11
Identity = 23/67 (34.33%), Postives = 29/67 (43.28%), Query Frame = -3
Query:  416 DGKTALHKPAANGDRRMVEMLIEMEADPTIKDDRGRSCF*RCSRQGTY*SLGGFTARRSGADGSKTR 616
            +G T LH  AA G  R V + +E  ADPT+KD                  +GGFTA    A   + R
Sbjct:   46 NGWTLLHFSAARGKERCVRVFLEHGADPTVKD-----------------LIGGFTALHYAAMHGRAR 95          
BLAST of CN191730 vs. ExPASy Swiss-Prot
Match: ASB7_HUMAN (Ankyrin repeat and SOCS box protein 7 OS=Homo sapiens GN=ASB7 PE=1 SV=2)

HSP 1 Score: 51.6026 bits (122), Expect = 5.962e-11
Identity = 35/95 (36.84%), Postives = 51/95 (53.68%), Query Frame = -1
Query:   67 GLTPLHVAAIKGHKHVVLLLIEFGADVECQDNEGHAPLHLAVEGGSTETVEVLLDNGANANARSKSGATPLYTAQAMGYDGISQLLMNRGASASL 351
            G TPLHVAA  G    V LL+EF A+V+   ++G  PL LA+    +  V++LLD+  NAN   ++G    Y A         ++ + RGA  +L
Sbjct:  117 GWTPLHVAAHYGRDSFVRLLLEFKAEVDPLSDKGTTPLQLAIIRERSSCVKILLDH--NANIDIQNGFLLRY-AVIKSNHSYCRMFLQRGADTNL 208          

HSP 2 Score: 34.6538 bits (78), Expect = 5.962e-11
Identity = 23/67 (34.33%), Postives = 29/67 (43.28%), Query Frame = -3
Query:  416 DGKTALHKPAANGDRRMVEMLIEMEADPTIKDDRGRSCF*RCSRQGTY*SLGGFTARRSGADGSKTR 616
            +G T LH  AA G  R V + +E  ADPT+KD                  +GGFTA    A   + R
Sbjct:   46 NGWTLLHFSAARGKERCVRVFLEHGADPTVKD-----------------LIGGFTALHYAAMHGRAR 95          
BLAST of CN191730 vs. ExPASy Swiss-Prot
Match: RIPK4_MOUSE (Receptor-interacting serine/threonine-protein kinase 4 OS=Mus musculus GN=Ripk4 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 6.644e-11
Identity = 39/114 (34.21%), Postives = 57/114 (50.00%), Query Frame = -1
Query:   88 AARRXXXXXXXXXLDKGASTNYCDQYGLTPLHVAAIKGHKHVVLLLIEFGADVECQDNEGHAPLHLAVEGGSTETVEVLLDNGANANARSKSGATPLYTAQAMGYDGISQLLMN 429
            AA+R         +D  +  N C     TPLHVAA  GH     LL+  GA  E   +EG+  LHLA + G   TV++L++  A+  AR     T L+ A A G+  + + L++
Sbjct:  613 AAQRGHYRVARILIDLCSDVNICSLQAQTPLHVAAETGHTSTARLLLHRGAGKEALTSEGYTALHLAAQNGHLATVKLLIEEKADVMARGPLNQTALHLAAARGHSEVVEELVS 726          
BLAST of CN191730 vs. ExPASy Swiss-Prot
Match: CTTB2_MUSPF (Cortactin-binding protein 2 OS=Mustela putorius furo GN=CTTNBP2 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.644e-11
Identity = 41/123 (33.33%), Postives = 65/123 (52.85%), Query Frame = -1
Query:   73 AVLTAARRXXXXXXXXXLDKGASTNYCDQYGLTPLHVAAIKGHKHVVLLLIEFGADVECQDNEGHAPLHLAVEGGSTETVEVLLDNGANANARSKSGATPLYTAQAMGYDGISQLLMNRGASA 441
            A+ +AA+          L+  A  N  D+ G TPL  AA +GH   V LLI + A++    +EG  PL+LA + G+ E ++ LL+ G + + +++ G TP++ A   G     +LLM   A A
Sbjct:  744 ALYSAAKNGHTDCVRLLLNAEAQVNAADKNGFTPLCAAAAQGHFKCVELLIAYNANINHAADEGQTPLYLACKNGNKECIKHLLEAGTDRSVKTRDGWTPVHAAVDAGNVDSLKLLMYHRAPA 866          
The following BLAST results are available for this feature:
BLAST of CN191730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
MYPT1_MOUSE5.087e-1138.00Protein phosphatase 1 regulatory subunit 12A OS=Mu... [more]
MYPT1_HUMAN5.087e-1138.00Protein phosphatase 1 regulatory subunit 12A OS=Ho... [more]
ANR31_HUMAN5.087e-1132.86Ankyrin repeat domain-containing protein 31 OS=Hom... [more]
ANR10_CHICK5.087e-1135.35Ankyrin repeat domain-containing protein 10 OS=Gal... [more]
ANKH_CHRVI5.087e-1129.94Ankyrin homolog OS=Chromatium vinosum PE=4 SV=1[more]
ASB7_PONAB5.962e-1136.84Ankyrin repeat and SOCS box protein 7 OS=Pongo abe... [more]
ASB7_MOUSE5.962e-1136.84Ankyrin repeat and SOCS box protein 7 OS=Mus muscu... [more]
ASB7_HUMAN5.962e-1136.84Ankyrin repeat and SOCS box protein 7 OS=Homo sapi... [more]
RIPK4_MOUSE6.644e-1134.21Receptor-interacting serine/threonine-protein kina... [more]
CTTB2_MUSPF6.644e-1133.33Cortactin-binding protein 2 OS=Mustela putorius fu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0005L12_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005L12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191730 ID=CN191730; Name=CN191730; organism=Citrus sinensis; type=EST; length=618bp
AGTCTTAACTCAGATCTTATTAAATAATCAGTCTTCTAATACAGAAGCTA
GCATGGAAGATTGAGGAAGGGAAGCGGAGGCTCCCCTGTTCATTAGCAAC
TGTGAGATACCATCGTACCCCATAGCTTGAGCCGTATAAAGAGGAGTGGC
TCCACTCTTGCTTCTGGCATTAGCATTGGCTCCGTTGTCGAGCAACACCT
CCACCGTCTCTGTACTGCCGCCCTCCACGGCCAAATGCAGCGGCGCGTGG
CCTTCGTTGTCCTGACATTCCACGTCGGCTCCGAATTCGATTAAAAGCAA
CACTACATGCTTGTGCCCTTTGATTGCTGCTACGTGGAGGGGCGTCAGGC
CGTACTGATCACAGTAGTTCGTGCTGGCACCTTTATCAAGCAGCGACTCG
AGACCCTCCAATTCTCCTCGTCTTGCTGCCGTCAGCACCGCTTCTCCGCG
CTGTAAAACCGCCAAGACTTCAATATGTCCCTTGTCGCGAGCAACGTCAA
AAGCACGAACGGCCACGATCATCCTTGATGGTAGGATCGGCTTCCATCTC
GATCAACATCTCCACCATCCTACGGTCACCGTTAGCTGCTGGCTTATGCA
ATGCCGTTTTCCCATCTT
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