CN191730

Overview
NameCN191730
Unique NameCN191730
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length618
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN191730 vs. ExPASy Swiss-Prot
Match: POTEC_HUMAN (POTE ankyrin domain family member C OS=Homo sapiens GN=POTEC PE=2 SV=2)

HSP 1 Score: 58.9214 bits (141), Expect = 1.595e-11
Identity = 36/106 (33.96%), Postives = 50/106 (47.17%), Query Frame = -1
Query:   70 DKGASTNYCDQYGLTPLHVAAIKGHKHVVLLLIEFGADVECQDNEGHAPLHLAVEGGSTETVEVLLDNGANANARSKSGATPLYTAQAMGYDGISQLLMNRGASAS 387
            + GA  N  D+YG T LH A     K +   L+ +GAD+E ++  G  PL L V     + V+ L+   AN NA  + G T L  A   G   I  LL+ +    S
Sbjct:  227 EHGADQNIPDEYGNTTLHYAVHNEDKLMAKALLLYGADIESKNKCGLTPLLLGVHEQKQQVVKFLIKKKANLNALDRYGRTALILAVCCGSASIVNLLLEQNVDVS 332          

HSP 2 Score: 29.261 bits (64), Expect = 1.595e-11
Identity = 11/35 (31.43%), Postives = 23/35 (65.71%), Query Frame = -3
Query:  506 KTALHKPAANGDRRMVEMLIEMEADPTIKDDRGRS 610
            +TALH  +ANG+  +V++L++      + D++ R+
Sbjct:  174 RTALHLASANGNSEVVQLLLDRRCQLNVLDNKKRT 208          
BLAST of CN191730 vs. ExPASy Swiss-Prot
Match: PSD10_DICDI (26S proteasome non-ATPase regulatory subunit 10 OS=Dictyostelium discoideum GN=psmD10 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.748e-11
Identity = 39/105 (37.14%), Postives = 56/105 (53.33%), Query Frame = -1
Query:   67 GASTNYCDQYGLTPLHVAAIKGHKHVVLLLIEFGADVECQDNEGHAPLHLAVEGGSTETVEVLLDNGANANARSKSGATPLYTAQAMGYDGISQLLMNRGASASL 381
            GA  N  +    TPLH A+ KG   +V LL+  GA    +D+ G AP+H A   GS  TVE LL   AN N+ +  G TPL+ A    ++ + + L+  GA  ++
Sbjct:  103 GADPNTVNDSKRTPLHYASSKGRSDIVDLLLTHGAKNR-KDDTGSAPIHRASSNGSVATVERLLKGEANINSTNNEGDTPLHIAAEYNHEDVVECLLKHGADTTI 206          
BLAST of CN191730 vs. ExPASy Swiss-Prot
Match: INVSB_XENLA (Inversin-B OS=Xenopus laevis GN=invs-B PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.748e-11
Identity = 35/93 (37.63%), Postives = 51/93 (54.84%), Query Frame = -1
Query:   67 TPLHVAAIKGHKHVVLLLIEFGADVECQDNEGHAPLHLAVEGGSTETVEVLLDNGANANARSKSGATPLYTAQAMGYDGISQLLMNRGASASL 345
            TPL  A   GH+ V+  LI+ GA V   D +G +PLH A  GG+    ++L++N  N +A+   G TPL  A   GY G  ++LM   A  ++
Sbjct:  388 TPLFRACEMGHREVIATLIKGGAKVHLVDKDGRSPLHWAALGGNANVCQILIENNINPDAQDYEGRTPLQCAAYGGYIGCMEVLMENKADPNI 480          

HSP 2 Score: 69.3218 bits (168), Expect = 1.748e-11
Identity = 46/138 (33.33%), Postives = 68/138 (49.28%), Query Frame = -1
Query:   79 ARDKGHIEVLAVLQRGEAVLTAARRXXXXXXXXXLDKGASTNYCDQYGLTPLHVAAIKGHKHVVLLLIEFGADVECQDNEGHAPLHLAVEGGSTETVEVLLDNGANANARSKSGATPLYTAQAMGYDGISQLLMNRGA 492
            A + GH EV+A L +G                     GA  +  D+ G +PLH AA+ G+ +V  +LIE   + + QD EG  PL  A  GG    +EVL++N A+ N + K+G T L+ +   GY    +LL+   A
Sbjct:  393 ACEMGHREVIATLIKG---------------------GAKVHLVDKDGRSPLHWAALGGNANVCQILIENNINPDAQDYEGRTPLQCAAYGGYIGCMEVLMENKADPNIQDKNGRTALHWSCNNGYLDAVKLLLGYNA 509          
BLAST of CN191730 vs. ExPASy Swiss-Prot
Match: ASB3_HUMAN (Ankyrin repeat and SOCS box protein 3 OS=Homo sapiens GN=ASB3 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.748e-11
Identity = 34/95 (35.79%), Postives = 56/95 (58.95%), Query Frame = -1
Query:   67 GLTPLHVAAIKGHKHVVLLLIEFGADVECQDNEGHAPLHLAVEGGSTETVEVLLDNGANANARSKSGATPLYTAQAMGYDGISQLLMNRGASASL 351
            G   LH A+ + +  ++ LL+  GA+ ECQD+ G  PL +A + G  E++ +L+ +GAN N ++   ATPL+ A   G+    +LL++ GA   L
Sbjct:  146 GWNSLHQASFQENAEIIKLLLRKGANKECQDDFGITPLFVAAQYGKLESLSILISSGANVNCQALDKATPLFIAAQEGHTKCVELLLSSGADPDL 240          
BLAST of CN191730 vs. ExPASy Swiss-Prot
Match: ANS1B_MOUSE (Ankyrin repeat and sterile alpha motif domain-containing protein 1B OS=Mus musculus GN=Anks1b PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.748e-11
Identity = 35/114 (30.70%), Postives = 60/114 (52.63%), Query Frame = -1
Query:   52 KGASTNYCDQYGLTPLHVAAIKGHKHVVLLLIEFGADVECQDNEGHAPLHLAVEGGSTETVEVLLDNG---ANANARSKSGATPLYTAQAMGYDGISQLLMNRGASASLPQSSM 384
            +G + N  D  G T LH AA+ GHK +VL L+++ A     DN+G+ P+HLA   G  E V++L+ +G   +  N ++    T L+ A   G+  +  +L+      ++  S +
Sbjct:   48 RGPNVNCTDSSGYTALHHAALNGHKDIVLKLLQYEASTNVADNKGYFPIHLAAWKGDVEIVKILIHHGPSHSRVNEQNNENETALHCAAQYGHSEVVAVLLEELTDPTIRNSKL 161          
BLAST of CN191730 vs. ExPASy Swiss-Prot
Match: ANS1B_HUMAN (Ankyrin repeat and sterile alpha motif domain-containing protein 1B OS=Homo sapiens GN=ANKS1B PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.748e-11
Identity = 35/114 (30.70%), Postives = 60/114 (52.63%), Query Frame = -1
Query:   52 KGASTNYCDQYGLTPLHVAAIKGHKHVVLLLIEFGADVECQDNEGHAPLHLAVEGGSTETVEVLLDNG---ANANARSKSGATPLYTAQAMGYDGISQLLMNRGASASLPQSSM 384
            +G + N  D  G T LH AA+ GHK +VL L+++ A     DN+G+ P+HLA   G  E V++L+ +G   +  N ++    T L+ A   G+  +  +L+      ++  S +
Sbjct:   48 RGPNVNCTDSSGYTALHHAALNGHKDIVLKLLQYEASTNVADNKGYFPIHLAAWKGDVEIVKILIHHGPSHSRVNEQNNENETALHCAAQYGHSEVVAVLLEELTDPTIRNSKL 161          
BLAST of CN191730 vs. ExPASy Swiss-Prot
Match: POTEF_HUMAN (POTE ankyrin domain family member F OS=Homo sapiens GN=POTEF PE=1 SV=2)

HSP 1 Score: 58.9214 bits (141), Expect = 2.035e-11
Identity = 35/106 (33.02%), Postives = 49/106 (46.23%), Query Frame = -1
Query:   70 DKGASTNYCDQYGLTPLHVAAIKGHKHVVLLLIEFGADVECQDNEGHAPLHLAVEGGSTETVEVLLDNGANANARSKSGATPLYTAQAMGYDGISQLLMNRGASAS 387
            + G   N  D+YG T LH A     K +   L+ +GAD+E ++  G  PL L V     + V+ L+   AN NA  + G T L  A   G   I  LL+ +    S
Sbjct:  227 EHGTDPNIPDEYGNTTLHYAIYNEDKLMAKALLLYGADIESKNKHGLTPLLLGVHEQKQQVVKFLIKKKANLNALDRYGRTALILAVCCGSASIVSLLLEQNIDVS 332          

HSP 2 Score: 28.8758 bits (63), Expect = 2.035e-11
Identity = 11/35 (31.43%), Postives = 23/35 (65.71%), Query Frame = -3
Query:  506 KTALHKPAANGDRRMVEMLIEMEADPTIKDDRGRS 610
            +TALH  +ANG+  +V++L++      + D++ R+
Sbjct:  174 RTALHLASANGNSEVVKLLLDRRCQLNVLDNKKRT 208          
BLAST of CN191730 vs. ExPASy Swiss-Prot
Match: POTEE_HUMAN (POTE ankyrin domain family member E OS=Homo sapiens GN=POTEE PE=1 SV=3)

HSP 1 Score: 58.9214 bits (141), Expect = 2.035e-11
Identity = 35/106 (33.02%), Postives = 49/106 (46.23%), Query Frame = -1
Query:   70 DKGASTNYCDQYGLTPLHVAAIKGHKHVVLLLIEFGADVECQDNEGHAPLHLAVEGGSTETVEVLLDNGANANARSKSGATPLYTAQAMGYDGISQLLMNRGASAS 387
            + G   N  D+YG T LH A     K +   L+ +GAD+E ++  G  PL L V     + V+ L+   AN NA  + G T L  A   G   I  LL+ +    S
Sbjct:  227 EHGTDPNIPDEYGNTTLHYAIYNEDKLMAKALLLYGADIESKNKHGLTPLLLGVHEQKQQVVKFLIKKKANLNALDRYGRTALILAVCCGSASIVSLLLEQNIDVS 332          

HSP 2 Score: 28.8758 bits (63), Expect = 2.035e-11
Identity = 11/35 (31.43%), Postives = 23/35 (65.71%), Query Frame = -3
Query:  506 KTALHKPAANGDRRMVEMLIEMEADPTIKDDRGRS 610
            +TALH  +ANG+  +V++L++      + D++ R+
Sbjct:  174 RTALHLASANGNSEVVKLLLDRRCQLNVLDNKKRT 208          
BLAST of CN191730 vs. ExPASy Swiss-Prot
Match: YN008_HUMAN (ANKRD26-like family C member ENSP00000349402 OS=Homo sapiens PE=3 SV=2)

HSP 1 Score: 58.5362 bits (140), Expect = 2.074e-11
Identity = 35/106 (33.02%), Postives = 49/106 (46.23%), Query Frame = -1
Query:   70 DKGASTNYCDQYGLTPLHVAAIKGHKHVVLLLIEFGADVECQDNEGHAPLHLAVEGGSTETVEVLLDNGANANARSKSGATPLYTAQAMGYDGISQLLMNRGASAS 387
            + G   N  D+YG T LH A     K +   L+ +GAD+E ++  G  PL L V     + V+ L+   AN NA  + G T L  A   G   I  LL+ +    S
Sbjct:  227 EHGTDPNIPDEYGNTALHYAIYNEDKLMAKALLLYGADIESKNKHGLTPLLLGVHEQKQQVVKFLIKKKANLNALDRYGRTVLILAVCCGSASIVSLLLEQNIDVS 332          

HSP 2 Score: 29.261 bits (64), Expect = 2.074e-11
Identity = 12/35 (34.29%), Postives = 23/35 (65.71%), Query Frame = -3
Query:  506 KTALHKPAANGDRRMVEMLIEMEADPTIKDDRGRS 610
            +TALH  +ANG+  +V++L++      I D++ R+
Sbjct:  174 RTALHLASANGNSEVVKLLLDRRCQLNILDNKKRT 208          
BLAST of CN191730 vs. ExPASy Swiss-Prot
Match: PSD10_RAT (26S proteasome non-ATPase regulatory subunit 10 OS=Rattus norvegicus GN=Psmd10 PE=2 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 2.119e-11
Identity = 39/116 (33.62%), Postives = 60/116 (51.72%), Query Frame = -1
Query:  127 EVLAVLQRG-EAVLTAARRXXXXXXXXXLDKGASTNYCDQYGLTPLHVAAIKGHKHVVLLLIEFGADVECQDNEGHAPLHLAVEGGSTETVEVLLDNGANANARSKSGATPLYTAQ 471
            +V AV Q G  A+  AA +         L+ GA+ +  + Y  T +H AA KG+  +V +L+ + A    QD EG+ PLHLA +    E  ++L+  GA+    +K   TPL  A+
Sbjct:   98 QVNAVNQNGCTALHYAASKNRHEIAVMLLEGGANPDAKNHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKLLVTQGASIYIENKEEKTPLQVAK 213          

HSP 2 Score: 28.8758 bits (63), Expect = 2.119e-11
Identity = 14/37 (37.84%), Postives = 20/37 (54.05%), Query Frame = -3
Query:  506 DGKTALHKPAANGDRRMVEMLIEMEADPTIKDDRGRS 616
            D +TALH   + G   +VE L+++      KDD G S
Sbjct:   39 DSRTALHWACSAGHTEIVEFLLQLGVPVNEKDDAGWS 75          
The following BLAST results are available for this feature:
BLAST of CN191730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
POTEC_HUMAN1.595e-1133.96POTE ankyrin domain family member C OS=Homo sapien... [more]
PSD10_DICDI1.748e-1137.1426S proteasome non-ATPase regulatory subunit 10 OS... [more]
INVSB_XENLA1.748e-1137.63Inversin-B OS=Xenopus laevis GN=invs-B PE=1 SV=1[more]
ASB3_HUMAN1.748e-1135.79Ankyrin repeat and SOCS box protein 3 OS=Homo sapi... [more]
ANS1B_MOUSE1.748e-1130.70Ankyrin repeat and sterile alpha motif domain-cont... [more]
ANS1B_HUMAN1.748e-1130.70Ankyrin repeat and sterile alpha motif domain-cont... [more]
POTEF_HUMAN2.035e-1133.02POTE ankyrin domain family member F OS=Homo sapien... [more]
POTEE_HUMAN2.035e-1133.02POTE ankyrin domain family member E OS=Homo sapien... [more]
YN008_HUMAN2.074e-1133.02ANKRD26-like family C member ENSP00000349402 OS=Ho... [more]
PSD10_RAT2.119e-1133.6226S proteasome non-ATPase regulatory subunit 10 OS... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS06_0005L12_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005L12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191730 ID=CN191730; Name=CN191730; organism=Citrus sinensis; type=EST; length=618bp
AGTCTTAACTCAGATCTTATTAAATAATCAGTCTTCTAATACAGAAGCTA
GCATGGAAGATTGAGGAAGGGAAGCGGAGGCTCCCCTGTTCATTAGCAAC
TGTGAGATACCATCGTACCCCATAGCTTGAGCCGTATAAAGAGGAGTGGC
TCCACTCTTGCTTCTGGCATTAGCATTGGCTCCGTTGTCGAGCAACACCT
CCACCGTCTCTGTACTGCCGCCCTCCACGGCCAAATGCAGCGGCGCGTGG
CCTTCGTTGTCCTGACATTCCACGTCGGCTCCGAATTCGATTAAAAGCAA
CACTACATGCTTGTGCCCTTTGATTGCTGCTACGTGGAGGGGCGTCAGGC
CGTACTGATCACAGTAGTTCGTGCTGGCACCTTTATCAAGCAGCGACTCG
AGACCCTCCAATTCTCCTCGTCTTGCTGCCGTCAGCACCGCTTCTCCGCG
CTGTAAAACCGCCAAGACTTCAATATGTCCCTTGTCGCGAGCAACGTCAA
AAGCACGAACGGCCACGATCATCCTTGATGGTAGGATCGGCTTCCATCTC
GATCAACATCTCCACCATCCTACGGTCACCGTTAGCTGCTGGCTTATGCA
ATGCCGTTTTCCCATCTT
back to top