CX301582

Overview
NameCX301582
Unique NameCX301582
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length562
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX301582 vs. ExPASy Swiss-Prot
Match: PPID_RAT (40 kDa peptidyl-prolyl cis-trans isomerase OS=Rattus norvegicus GN=Ppid PE=1 SV=3)

HSP 1 Score: 196.823 bits (499), Expect = 5.998e-50
Identity = 101/170 (59.41%), Postives = 115/170 (67.65%), Query Frame = 1
Query:   10 NPKVFFDITIGGNDAGRIVFELRKDVVPITAENFRCLCTGEKGVGKS-GKPLHYKGSAFHRIIPNFMCQXXXXXXXXXXXXESIYGEKFKDENFDLKHTGPGDLSMANAGPNTNGSQFFICTVKTSWLDGKHTVFGKVVEGMDVVKKMEAVGSQSGATSKPVVIKNCGQL 516
            NP+VFFD+ IGG   GRIV EL  D+VP TAENFR LCTGEKG G + GKPLH+KG  FHRII  FM Q            ESIYGEKF+DENF  KH   G LSMANAGPNTNGSQFFI TV T  LDGKH VFG+V++G+ V + +E V       +K  VI  CG+L
Sbjct:   15 NPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGTGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGQVIKGLGVARMLENVEVNGEKPAKLCVIAECGEL 184          
BLAST of CX301582 vs. ExPASy Swiss-Prot
Match: PPID_ASPOR (Peptidyl-prolyl cis-trans isomerase D OS=Aspergillus oryzae GN=cpr6 PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 7.833e-50
Identity = 100/169 (59.17%), Postives = 116/169 (68.64%), Query Frame = 1
Query:   13 PKVFFDITIGGNDAGRIVFELRKDVVPITAENFRCLCTGEKGVGKSGKPLHYKGSAFHRIIPNFMCQXXXXXXXXXXXXESIYGEKFKDENFDLKHTGPGDLSMANAGPNTNGSQFFICTVKTSWLDGKHTVFGKVVEGMDVVKKMEAVGSQSGATSKPVVIKNCGQLS 519
            P+VFFDI IG    GRI  EL   +VP TAENFR LCTGEKG+GK GKPLH+KGS FHR+I  FM Q            ESIYGEKF DENF+LKH  P  LSMAN+GP TNGSQFFI TV T  LDGKH VFG+V+ G  VV+K+E + +Q+    K V I  CG+L+
Sbjct:    8 PRVFFDIQIGNEKTGRIALELV--LVPKTAENFRALCTGEKGMGKQGKPLHFKGSIFHRVIKQFMIQGGDFTAFNGTGGESIYGEKFPDENFELKHDKPFLLSMANSGPGTNGSQFFITTVPTPHLDGKHVVFGEVINGKSVVRKVENMNTQADKPVKDVTIVECGELT 174          
BLAST of CX301582 vs. ExPASy Swiss-Prot
Match: PPIA_CANAL (Peptidyl-prolyl cis-trans isomerase OS=Candida albicans GN=CYP1 PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.023e-49
Identity = 99/166 (59.64%), Postives = 115/166 (69.28%), Query Frame = 1
Query:   19 VFFDITIGGNDAGRIVFELRKDVVPITAENFRCLCTGEKGVGKSGKPLHYKGSAFHRIIPNFMCQXXXXXXXXXXXXESIYGEKFKDENFDLKHTGPGDLSMANAGPNTNGSQFFICTVKTSWLDGKHTVFGKVVEGMDVVKKMEAVGSQSGATSKPVVIKNCGQL 516
            V+FD++  G   G+I F+L  DVVP TAENFR LCTGEKG G       YKGS FHR+IP FM Q            +SIYG KF DENF  +H  PG LSMANAGPNTNGSQFFI TV   WLDGKH VFG+V +G+D+VKK+E+ GS SGATSK +VI+  GQL
Sbjct:    4 VYFDVSADGQKLGKITFKLYDDVVPKTAENFRALCTGEKGFG-------YKGSIFHRVIPQFMLQGGDFTNFNGTGGKSIYGTKFADENFVKRHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVTDGLDIVKKIESFGSGSGATSKKIVIEESGQL 162          
BLAST of CX301582 vs. ExPASy Swiss-Prot
Match: PPIH_NEUCR (Peptidyl-prolyl cis-trans isomerase H OS=Neurospora crassa GN=cyp-3 PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.336e-49
Identity = 109/175 (62.29%), Postives = 118/175 (67.43%), Query Frame = 1
Query:   10 NPKVFFDITIGGNDAGRIVFELRKDVVPITAENFRCLCTGEKGVGKSGKPLHYKGSAFHRIIPNFMCQXXXXXXXXXXXXESIYGEK-FKDENFDLKHTGPGDLSMANAGPNTNGSQFFICTVKTSWLDGKHTVFGKVVEGMDVVKKMEAVGSQSGATSK-----PVVIKNCGQL 516
            NP VFFDIT+GG   GRI FEL KDVVP TAENFR  CTGE      G+P  YKGS FHRIIPNFMCQ              IYG K F DENF LKH  PG LSMANAGPNTNGSQFFI TV T +LDGKH VFGKVV+GMDVVKKME   +++G   K      VVI  CG++
Sbjct:   11 NPLVFFDITLGGEPLGRITFELFKDVVPRTAENFRQFCTGESK-NNLGRPQGYKGSKFHRIIPNFMCQGGDFLNGDGTGSTCIYGTKSFADENFLLKHDTPGLLSMANAGPNTNGSQFFITTVPTPFLDGKHVVFGKVVDGMDVVKKME--NTKTGYRGKDVPNLDVVIAQCGEM 182          
BLAST of CX301582 vs. ExPASy Swiss-Prot
Match: PPID_DEBHA (Peptidyl-prolyl cis-trans isomerase D OS=Debaryomyces hansenii GN=CPR6 PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.336e-49
Identity = 102/175 (58.29%), Postives = 120/175 (68.57%), Query Frame = 1
Query:    4 MSNPKVFFDITIGGNDAGRIVFELRKDVVPITAENFRCLCTGEKGVGKS-GKPLHYKGSAFHRIIPNFMCQXXXXXXXXXXXXESIYGEKFKDENFDLKHTGPGDLSMANAGPNTNGSQFFICTVKTSWLDGKHTVFGKVVEGMDVVKKMEAVGSQSGATSKPV---VIKNCGQL 516
            ++ PKVFFDI+  G   GR+VFEL  DVVP TAENFR LCTGEKG  +S GK LHYKGS FHRII +FMCQ            ESIYGEKF+DENF L H  P  LSMANAG NTNGSQFFI TV T  L+GKH VFG+V++G  +V+++E      G   KPV   +I +CG+L
Sbjct:    5 LNRPKVFFDISADGKPKGRVVFELYNDVVPKTAENFRALCTGEKGASESSGKQLHYKGSIFHRIIKDFMCQGGDFTHGSGIGGESIYGEKFEDENFQLTHDKPFLLSMANAGANTNGSQFFITTVPTPHLNGKHVVFGEVIQGKSIVRQLER--CDKGENDKPVEDWIISDCGEL 177          
BLAST of CX301582 vs. ExPASy Swiss-Prot
Match: PPIH_GIBZE (Peptidyl-prolyl cis-trans isomerase H OS=Gibberella zeae GN=CYP3 PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 1.745e-49
Identity = 108/173 (62.43%), Postives = 115/173 (66.47%), Query Frame = 1
Query:   10 NPKVFFDITIGGNDAGRIVFELRKDVVPITAENFRCLCTGEKGVGKSGKPLHYKGSAFHRIIPNFMCQXXXXXXXXXXXXESIYGEK-FKDENFDLKHTGPGDLSMANAGPNTNGSQFFICTVKTSWLDGKHTVFGKVVEGMDVVKKMEAVGSQSGATSKP---VVIKNCGQL 516
            NP VFFDITIGG   GRI FEL KDVVP TAENFR  CTGE      G+P  YKGS FHRIIPNFMCQ              I+G K F+DENF LKH  PG LSMANAGPNTNGSQFFI TV T +LD KH VFGKV EGMDVVKKMEA  +       P   VVI  CG++
Sbjct:   11 NPLVFFDITIGGEPLGRITFELFKDVVPKTAENFRQFCTGESKT-PVGRPQGYKGSKFHRIIPNFMCQGGDFLNGDGTGSTCIWGFKSFEDENFTLKHDQPGLLSMANAGPNTNGSQFFITTVPTPFLDNKHVVFGKVFEGMDVVKKMEATKTGYRGKDMPNLDVVISQCGEM 182          
BLAST of CX301582 vs. ExPASy Swiss-Prot
Match: PPID_HUMAN (40 kDa peptidyl-prolyl cis-trans isomerase OS=Homo sapiens GN=PPID PE=1 SV=3)

HSP 1 Score: 195.282 bits (495), Expect = 1.745e-49
Identity = 101/171 (59.06%), Postives = 117/171 (68.42%), Query Frame = 1
Query:    7 SNPKVFFDITIGGNDAGRIVFELRKDVVPITAENFRCLCTGEKGVGKS-GKPLHYKGSAFHRIIPNFMCQXXXXXXXXXXXXESIYGEKFKDENFDLKHTGPGDLSMANAGPNTNGSQFFICTVKTSWLDGKHTVFGKVVEGMDVVKKMEAVGSQSGATSKPVVIKNCGQL 516
            SNP+VFFD+ IGG   GRIV EL  D+VP TAENFR LCTGEKG+G + GKPLH+KG  FHRII  FM Q            ESIYGEKF+DENF  KH   G LSMANAG NTNGSQFFI TV T  LDGKH VFG+V++G+ V + +E V  +    +K  VI  CG+L
Sbjct:   14 SNPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGHTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSMANAGRNTNGSQFFITTVPTPHLDGKHVVFGQVIKGIGVARILENVEVKGEKPAKLCVIAECGEL 184          
BLAST of CX301582 vs. ExPASy Swiss-Prot
Match: PPID_DICDI (Peptidyl-prolyl cis-trans isomerase D, mitochondrial OS=Dictyostelium discoideum GN=cypD PE=1 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 1.745e-49
Identity = 103/168 (61.31%), Postives = 117/168 (69.64%), Query Frame = 1
Query:   16 KVFFDITIGGNDAGRIVFELRKDVVPITAENFRCLCTGEKGVGKSGKPLHYKGSAFHRIIPNFMCQXXXXXXXXXXXXESIYGEKFKDENFDLKHTGPGDLSMANAGPNTNGSQFFICTVKTSWLDGKHTVFGKVVEGMDVVKKME-AVGSQSGATSKPVVIKNCGQL 516
            KVFF I  G    GR+VFEL  D+VP TAENFR LCTGEKG+GKSGKPLHYKGS+FHR+I NFM Q            ESIYG  F DENF +KH   G LSMANAG NTNGSQFFI T +T  L+G HTVFG+VVEG D+VKK+E A   +S       VI++CGQL
Sbjct:    8 KVFFQIKQGNTPLGRVVFELYNDIVPKTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIKNFMVQGGDFTHGTGIGGESIYGRTFNDENFLVKHK-IGCLSMANAGKNTNGSQFFITTAETPHLNGGHTVFGEVVEGFDIVKKVENAETDRSDRPKAACVIEDCGQL 174          
BLAST of CX301582 vs. ExPASy Swiss-Prot
Match: CYP40_ARATH (Peptidyl-prolyl cis-trans isomerase CYP40 OS=Arabidopsis thaliana GN=CYP40 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 6.631e-49
Identity = 101/173 (58.38%), Postives = 118/173 (68.21%), Query Frame = 1
Query:    4 MSNPKVFFDITIGGNDAGRIVFELRKDVVPITAENFRCLCTGEKGVG-KSGKPLHYKGSAFHRIIPNFMCQXXXXXXXXXXXXESIYGEKFKDENFDLKHTGPGDLSMANAGPNTNGSQFFICTVKTSWLDGKHTVFGKVVEGMDVVKKMEAVG-SQSGATSKPVVIKNCGQL 516
            M   K F DI+IGG   GRIV EL  DVVP TAENFR LCTGEKG+G  +G PLHYKG+ FHR+I  FM Q            ESIYG KF DENF+LKH   G LSMAN+GPNTNGSQFFI T +TS LDGKH VFG+V +GM VV+ +E V   +    S+ VVI +CG++
Sbjct:    1 MGRSKCFMDISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNRFHRVIKGFMIQGGDISANDGTGGESIYGLKFDDENFELKHERKGMLSMANSGPNTNGSQFFITTTRTSHLDGKHVVFGRVTKGMGVVRSIEHVSIEEQSCPSQDVVIHDCGEI 173          
BLAST of CX301582 vs. ExPASy Swiss-Prot
Match: CP20B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-2, chloroplastic OS=Arabidopsis thaliana GN=CYP20-2 PE=1 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 3.291e-48
Identity = 101/171 (59.06%), Postives = 116/171 (67.84%), Query Frame = 1
Query:   16 KVFFDITIG---GNDAGRIVFELRKDVVPITAENFRCLCTGEKGVGKSGKPLHYKGSAFHRIIPNFMCQXXXXXXXXXXXXESIYGEKFKDENFDLKHTGPGDLSMANAGPNTNGSQFFICTVKTSWLDGKHTVFGKVVEGMDVVKKMEAVGSQSG-ATSKPVVIKNCGQL 516
            KV+FDI++G   G  AGRIV  L  D VP T ENFR LCTGEKG G       YKGS FHR+I +FM Q            +S+YG  FKDENF L H GPG LSMANAGPNTNGSQFFICT+KTSWLDG+H VFG+V+EGM+VVK +E   +  G    K VVI +CGQL
Sbjct:   91 KVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFG-------YKGSTFHRVIRDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVVFGQVIEGMEVVKLIEEQETDRGDRPRKKVVIADCGQL 254          
The following BLAST results are available for this feature:
BLAST of CX301582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 231
Match NameE-valueIdentityDescription
PPID_RAT5.998e-5059.4140 kDa peptidyl-prolyl cis-trans isomerase OS=Ratt... [more]
PPID_ASPOR7.833e-5059.17Peptidyl-prolyl cis-trans isomerase D OS=Aspergill... [more]
PPIA_CANAL1.023e-4959.64Peptidyl-prolyl cis-trans isomerase OS=Candida alb... [more]
PPIH_NEUCR1.336e-4962.29Peptidyl-prolyl cis-trans isomerase H OS=Neurospor... [more]
PPID_DEBHA1.336e-4958.29Peptidyl-prolyl cis-trans isomerase D OS=Debaryomy... [more]
PPIH_GIBZE1.745e-4962.43Peptidyl-prolyl cis-trans isomerase H OS=Gibberell... [more]
PPID_HUMAN1.745e-4959.0640 kDa peptidyl-prolyl cis-trans isomerase OS=Homo... [more]
PPID_DICDI1.745e-4961.31Peptidyl-prolyl cis-trans isomerase D, mitochondri... [more]
CYP40_ARATH6.631e-4958.38Peptidyl-prolyl cis-trans isomerase CYP40 OS=Arabi... [more]
CP20B_ARATH3.291e-4859.06Peptidyl-prolyl cis-trans isomerase CYP20-2, chlor... [more]

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Properties
Property NameValue
Genbank descriptionC08011C12SK PhyRootSw1 Citrus sinensis cDNA clone C08011C12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301582 ID=CX301582; Name=CX301582; organism=Citrus sinensis; type=EST; length=562bp
ACGATGAGTAACCCCAAAGTCTTTTTTGATATTACTATTGGAGGTAATGA
TGCTGGTAGAATTGTCTTTGAATTACGTAAAGACGTAGTACCAATCACTG
CTGAAAATTTCAGATGTCTTTGTACTGGTGAAAAAGGAGTAGGTAAATCA
GGAAAACCTCTTCACTATAAAGGTAGTGCTTTCCACAGAATCATCCCCAA
CTTCATGTGTCAAGGAGGTGATTTTACTAAAGGAAATGGAACTGGAGGCG
AATCGATCTATGGAGAAAAATTTAAAGATGAAAACTTTGATTTAAAACAT
ACTGGACCTGGTGATCTTTCAATGGCCAATGCTGGACCAAACACTAATGG
AAGTCAATTCTTCATTTGTACTGTTAAAACATCATGGTTAGATGGAAAAC
ACACTGTCTTTGGCAAAGTTGTTGAAGGAATGGATGTTGTTAAAAAGATG
GAAGCTGTTGGTTCTCAGAGTGGAGCTACCTCCAAACCTGTTGTGATCAA
AAACTGTGGACAATTGAGTTAAATGAAATTTTATTGATAAACTACTAAAA
AAAAAAAAAAAA
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