CX301576
Overview
Analyses
This EST is derived from or has results from the following analyses
Libraries
Homology
BLAST of CX301576 vs. ExPASy Swiss-Prot
Match: UDG_RICPR (UDP-glucose 6-dehydrogenase OS=Rickettsia prowazekii GN=udg PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.615e-17 Identity = 58/176 (32.95%), Postives = 93/176 (52.84%), Query Frame = 2 Query: 143 LKICCMGAGYVGGPTMAVIALKAPRIKVTVVDLSEKQIAAWNSSSLPIYEPGLQEIVEQ-VRGKNLFFSTDIDTGIREADIIFVSVNTPTKTTGIGAGRAANIKNCELCARKIAEVATEDKIVVEKSTVPVRTAESMKRVLAAASHYKFQVLSNPEFLAEGTAINDLLFPSRVLIG 667 + I +G+GYVG ++ I + VT +D + +I+ N LPIYE L E ++ + L F+ R D IF++V TP+K G A++K K+++ +D ++V KSTVP + ++ L A + F V SNPEFL EG+A+ D L+P R+++G Sbjct: 1 MNITFIGSGYVG--LVSGIIMGYLGHNVTCLDNDDVKISKLNKKILPIYEAKLDEYLKHALESDRLKFTNIYSNEFRNFDAIFITVGTPSKELG-----EADLKYVYDAVDKVSKHINKDCLIVIKSTVPPGSCNNIIAYLKAKG-FSFNVASNPEFLREGSAVEDFLYPDRIVVG 168
BLAST of CX301576 vs. ExPASy Swiss-Prot
Match: UDG_RICBR (UDP-glucose 6-dehydrogenase OS=Rickettsia bellii (strain RML369-C) GN=udg PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.514e-16 Identity = 59/189 (31.22%), Postives = 100/189 (52.91%), Query Frame = 2 Query: 143 LKICCMGAGYVGGPTMAVIALKAPRIKVTVVDLSEKQIAAWNSSSLPIYEPGLQEIVEQ-VRGKNLFFSTDIDTGIREADIIFVSVNTPTKTTGIGAGRAANIKNCELCARKIAEVATEDKIVVEKSTVPVRTAESMKRVLAAASHYKFQVLSNPEFLAEGTAINDLLFPSRVLIG--GEQTPDGLRAI 700 + I +G+GYVG ++ + + VT +D E +I+ N LPIYE L + Q + + L F++ + ++ + +F++V TP+K +G A++ KI+ +D ++V KSTVP + ++ L + F V SNPEFL EG A+ D L+P R++IG +++ D LR I Sbjct: 1 MNITFIGSGYVG--LVSGVMMSYLGHNVTCLDNDEAKISKLNKRILPIYETKLDKYFTQALEHERLKFTSFYNEELKNTEAVFITVGTPSKASG-----EADLSYVYEAIDKISLHINKDCLIVIKSTVPPNSCNNIINYLKEKG-FSFNVASNPEFLREGNAVEDFLYPDRIVIGVNNKESEDILRKI 181
BLAST of CX301576 vs. ExPASy Swiss-Prot
Match: ALGD_PSESY (GDP-mannose 6-dehydrogenase OS=Pseudomonas syringae pv. syringae GN=algD PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.795e-13 Identity = 61/184 (33.15%), Postives = 85/184 (46.20%), Query Frame = 2 Query: 143 LKICCMGAGYVGGPTMAVIALKAPRIKVTVVDLSEKQIAAWNSSSLPIYEPGLQEIVEQ-VRGKNLFFSTDIDTGIREADIIFVSVNTPTKTTGIGAGRAANIKNCELCARKIAEV----ATEDKIVVEKSTVPVRTAESMKRVLAAASHYK----FQVLSNPEFLAEGTAINDLLFPSRVLIG 667 ++I G GYVG + L A +V VD+S +I N+ PI EPGL+E++++ + L +TD IR D+ + V TP+K G + E R+I V AT IVV + +P A + +L S K F V NPEFL E TAI D P +IG Sbjct: 1 MRISIFGLGYVGA--VCAGCLSARGHEVVGVDISSTKIDLINNGKSPIVEPGLEELLQKGISTGKLRGTTDFAEAIRATDLSMICVGTPSKKNG-----DLELDYIESVCREIGYVLRDKATRHTIVVRSTVLPGTVANVVIPILEDCSGKKAGVDFGVAVNPEFLRESTAIKDYDLPPMTVIG 177
BLAST of CX301576 vs. ExPASy Swiss-Prot
Match: ALGD_PSEAE (GDP-mannose 6-dehydrogenase OS=Pseudomonas aeruginosa GN=algD PE=1 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 5.795e-13 Identity = 62/194 (31.96%), Postives = 91/194 (46.91%), Query Frame = 2 Query: 143 LKICCMGAGYVGGPTMAVIALKAPRIKVTVVDLSEKQIAAWNSSSLPIYEPGLQEIVEQVRGKN-LFFSTDIDTGIREADIIFVSVNTPTKTTG-IGAGRAANIKNCELCARKIAEVATEDKIVVEKSTVPVRTAESMKRVLAAASHYK----FQVLSNPEFLAEGTAINDLLFPSRVLIG--GEQTPDGLRAI 700 ++I G GYVG + L A +V VD+S +I N PI EPGL+ +++Q R L +TD + ++D+ F+ V TP+K G + G + C I E + +VV + +P + ++ S K F V +NPEFL E TAI D FP +IG +QT D L I Sbjct: 1 MRISIFGLGYVGA--VCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVSFICVGTPSKKNGDLDLGYIETV--CREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDCSGKKAGVDFGVGTNPEFLRESTAIKDYDFPPMTVIGELDKQTGDLLEEI 190
BLAST of CX301576 vs. ExPASy Swiss-Prot
Match: ALGD_PSESH (GDP-mannose 6-dehydrogenase OS=Pseudomonas syringae pv. phaseolicola GN=algD PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.885e-13 Identity = 61/184 (33.15%), Postives = 84/184 (45.65%), Query Frame = 2 Query: 143 LKICCMGAGYVGGPTMAVIALKAPRIKVTVVDLSEKQIAAWNSSSLPIYEPGLQEIVEQ-VRGKNLFFSTDIDTGIREADIIFVSVNTPTKTTGIGAGRAANIKNCELCARKIAEV----ATEDKIVVEKSTVPVRTAESMKRVLAAASHYK----FQVLSNPEFLAEGTAINDLLFPSRVLIG 667 ++I G GYVG + L A V VD+S +I N+ PI EPGL+E++++ + L +TD IR D+ + V TP+K G + E R+I V AT IVV + +P A + +L S K F V NPEFL E TAI D P +IG Sbjct: 1 MRISIFGLGYVGA--VCAGCLSARGHDVVGVDISSTKIDLINNGKSPIVEPGLEELLQKGISTGKLRGTTDFAEAIRATDLSMICVGTPSKKNG-----DLELDYIESVCREIGYVLRDKATRHTIVVRSTVLPGTVANVVIPILEDCSGKKAGVDFGVAVNPEFLRESTAIKDYDLPPMTVIG 177
BLAST of CX301576 vs. ExPASy Swiss-Prot
Match: ALGD_PSESM (GDP-mannose 6-dehydrogenase OS=Pseudomonas syringae pv. tomato GN=algD PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.906e-12 Identity = 62/185 (33.51%), Postives = 84/185 (45.41%), Query Frame = 2 Query: 143 LKICCMGAGYVGGPTMAVIALKAPRIKVTVVDLSEKQIAAWNSSSLPIYEPGLQEIVEQ--VRGKNLFFSTDIDTGIREADIIFVSVNTPTKTTGIGAGRAANIKNCELCARKIAEVA----TEDKIVVEKSTVPVRTAESMKRVLAAASHYK----FQVLSNPEFLAEGTAINDLLFPSRVLIG 667 ++I G GYVG + L A V VD+S +I N+ PI EPGL+E++++ GK L +TD IR D+ + V TP+K G + E R+I V T IVV + +P A + +L S K F V NPEFL E TAI D P +IG Sbjct: 1 MRISIFGLGYVGA--VCAGCLSARGHDVVGVDISSTKIDLINNGKSPIVEPGLEELLQKGLATGK-LRGTTDFAEAIRATDLSMICVGTPSKKNG-----DLELDYIESVCREIGYVLRDKNTRHTIVVRSTVLPGTVANVVIPILEDCSGKKAGVDFGVAVNPEFLRESTAIKDYDLPPMTVIG 177
BLAST of CX301576 vs. ExPASy Swiss-Prot
Match: ALGD_PSEPK (GDP-mannose 6-dehydrogenase OS=Pseudomonas putida (strain KT2440) GN=algD PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.864e-11 Identity = 57/188 (30.32%), Postives = 84/188 (44.68%), Query Frame = 2 Query: 143 LKICCMGAGYVGGPTMAVIALKAPRIKVTVVDLSEKQIAAWNSSSLPIYEPGLQEIVEQ-VRGKNLFFSTDIDTGIREADIIFVSVNTPTKTTG-IGAGRAANIKNCELCARKIAEVATEDKIVVEKSTVPVRTAESMKRVLAAASHYK----FQVLSNPEFLAEGTAINDLLFPSRVLIGGEQTPDG 688 ++I G GYVG + L A +V VD+S +I N PI EPGL+ +++Q + L +TD IR +D+ + V TP+K G +G ++ C + + IVV + +P + +L S K F V NPEFL E TAI D P +IG + G Sbjct: 1 MRISIFGLGYVGA--VCAGCLTARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGIANGRLRGTTDFAEAIRASDVSMICVGTPSKKNGDLGLEYIESV--CREIGYVLRDTTRRHTIVVRSTVLPGTVKNVVIPILEDCSGKKAGVDFGVAVNPEFLRESTAIKDYDQPPMTVIGELDSASG 184 The following BLAST results are available for this feature:
BLAST of CX301576 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX301576 ID=CX301576; Name=CX301576; organism=Citrus sinensis; type=EST; length=740bpback to top |