CN191687

Overview
NameCN191687
Unique NameCN191687
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length515
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN191687 vs. ExPASy Swiss-Prot
Match: NUOB_CARHZ (NADH-quinone oxidoreductase subunit B OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=nuoB PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 9.885e-11
Identity = 28/53 (52.83%), Postives = 39/53 (73.58%), Query Frame = 2 
Query:  359 ISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGI-IFRPSPR 514
            ++ LD V N+ R  S+WP++FGLACCA+E+M  G  +YD  RFG  ++RPSPR
Sbjct:   20 LTTLDAVFNWARGNSLWPLTFGLACCAIEVMAAGGPKYDFSRFGYEVWRPSPR 72
The following BLAST results are available for this feature:
BLAST of CN191687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 281
Match NameE-valueIdentityDescription
NUOB_CARHZ9.885e-1152.83NADH-quinone oxidoreductase subunit B OS=Carboxydo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0005K06_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005K06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191687 ID=CN191687; Name=CN191687; organism=Citrus sinensis; type=EST; length=515bp
GCTAAATCCCAATACTACCGGAGAGAGTAACCACCACTTTCAAACCCCAA
CAACAATCAATTTCTCTCTCGCTTTGCCCCCGTGTGAGAAAACTAAACCA
AACCAAACCAAACCCCACCCCACAACCCCCAAAACACAAGCCCAAAAAAA
AAAAACTATGGCGGTACTCACCAAAAACACTGCCACGCGCCTCCCTCTCC
TCCTCTCGCAACGCGCCGCCTGTCTCCACACGACCGTCCCCTCTCTCTCC
TCGGCCTCCGGCTCCTCCTCCTCCTCCTCGCAGCCCACCTCCTACGCTCG
CCCTCCACCGCCCTCGACCACAAGTCCAGGCGGTATCTCAAAGACGGCGG
AATTCGTGATCTCTAAATTGGATGATGTCGTCAACTATATTCGTCGCGGC
TCCATCTGGCCCATGTCCTTCGGGCTGGCCTGCTGCGCCGTCGAGATGAT
GCACACCGGTGCTGCTCGTTACGATTTAGATCGATTCGGTATCATTTTCA
GGCCCAGCCCTCGCC
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