CN191687

Overview
NameCN191687
Unique NameCN191687
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length515
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN191687 vs. ExPASy Swiss-Prot
Match: NUOB_BURM1 (NADH-quinone oxidoreductase subunit B OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=nuoB PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.427e-19
Identity = 39/54 (72.22%), Postives = 47/54 (87.04%), Query Frame = 2 
Query:  353 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPR 514
            FV +  D ++N+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFG++FRPSPR
Sbjct:   11 FVTTTADKLINWTRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGVVFRPSPR 64
[Close]
BLAST of CN191687 vs. ExPASy Swiss-Prot
Match: NUOB_BURCM (NADH-quinone oxidoreductase subunit B OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=nuoB PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.427e-19
Identity = 39/54 (72.22%), Postives = 47/54 (87.04%), Query Frame = 2 
Query:  353 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPR 514
            FV +  D ++N+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFG++FRPSPR
Sbjct:   11 FVTTTADKLINWTRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGVVFRPSPR 64
[Close]
BLAST of CN191687 vs. ExPASy Swiss-Prot
Match: NUOB_BURCJ (NADH-quinone oxidoreductase subunit B OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=nuoB PE=3 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 4.427e-19
Identity = 39/54 (72.22%), Postives = 47/54 (87.04%), Query Frame = 2 
Query:  353 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPR 514
            FV +  D ++N+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFG++FRPSPR
Sbjct:   11 FVTTTADKLINWTRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGVVFRPSPR 64
[Close]
BLAST of CN191687 vs. ExPASy Swiss-Prot
Match: NUOB_BURCH (NADH-quinone oxidoreductase subunit B OS=Burkholderia cenocepacia (strain HI2424) GN=nuoB PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.427e-19
Identity = 39/54 (72.22%), Postives = 47/54 (87.04%), Query Frame = 2 
Query:  353 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPR 514
            FV +  D ++N+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFG++FRPSPR
Sbjct:   11 FVTTTADKLINWTRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGVVFRPSPR 64
[Close]
BLAST of CN191687 vs. ExPASy Swiss-Prot
Match: NUOB_BURCC (NADH-quinone oxidoreductase subunit B OS=Burkholderia cenocepacia (strain MC0-3) GN=nuoB PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.427e-19
Identity = 39/54 (72.22%), Postives = 47/54 (87.04%), Query Frame = 2 
Query:  353 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPR 514
            FV +  D ++N+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFG++FRPSPR
Sbjct:   11 FVTTTADKLINWTRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGVVFRPSPR 64
[Close]
BLAST of CN191687 vs. ExPASy Swiss-Prot
Match: NUOB_BURCA (NADH-quinone oxidoreductase subunit B OS=Burkholderia cenocepacia (strain AU 1054) GN=nuoB PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.427e-19
Identity = 39/54 (72.22%), Postives = 47/54 (87.04%), Query Frame = 2 
Query:  353 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPR 514
            FV +  D ++N+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFG++FRPSPR
Sbjct:   11 FVTTTADKLINWTRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGVVFRPSPR 64
[Close]
BLAST of CN191687 vs. ExPASy Swiss-Prot
Match: NUOB_BURA4 (NADH-quinone oxidoreductase subunit B OS=Burkholderia ambifaria (strain MC40-6) GN=nuoB PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.427e-19
Identity = 39/54 (72.22%), Postives = 47/54 (87.04%), Query Frame = 2 
Query:  353 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPR 514
            FV +  D ++N+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFG++FRPSPR
Sbjct:   11 FVTTTADKLINWTRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGVVFRPSPR 64
[Close]
BLAST of CN191687 vs. ExPASy Swiss-Prot
Match: NUOB_AZOSE (NADH-quinone oxidoreductase subunit B OS=Azoarcus sp. (strain EbN1) GN=nuoB PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.427e-19
Identity = 39/54 (72.22%), Postives = 47/54 (87.04%), Query Frame = 2 
Query:  353 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPR 514
            FV + LD V+N+ R GS+WPM+FGLACCAVEM+H G ARYDLDRFG++FRPSPR
Sbjct:   11 FVTTSLDAVINWTRTGSLWPMTFGLACCAVEMIHAGCARYDLDRFGVVFRPSPR 64
[Close]
BLAST of CN191687 vs. ExPASy Swiss-Prot
Match: NUOB1_BURPS (NADH-quinone oxidoreductase subunit B 1 OS=Burkholderia pseudomallei GN=nuoB1 PE=3 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 4.427e-19
Identity = 39/54 (72.22%), Postives = 47/54 (87.04%), Query Frame = 2 
Query:  353 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPR 514
            FV +  D ++N+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFG++FRPSPR
Sbjct:   11 FVTTTADKLINWTRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGVVFRPSPR 64
[Close]
BLAST of CN191687 vs. ExPASy Swiss-Prot
Match: NUOB1_BURP6 (NADH-quinone oxidoreductase subunit B 1 OS=Burkholderia pseudomallei (strain 668) GN=nuoB1 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.427e-19
Identity = 39/54 (72.22%), Postives = 47/54 (87.04%), Query Frame = 2 
Query:  353 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPR 514
            FV +  D ++N+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFG++FRPSPR
Sbjct:   11 FVTTTADKLINWTRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGVVFRPSPR 64
The following BLAST results are available for this feature:
BLAST of CN191687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 281
Match NameE-valueIdentityDescription
NUOB_BURM14.427e-1972.22NADH-quinone oxidoreductase subunit B OS=Burkholde... [more]
NUOB_BURCM4.427e-1972.22NADH-quinone oxidoreductase subunit B OS=Burkholde... [more]
NUOB_BURCJ4.427e-1972.22NADH-quinone oxidoreductase subunit B OS=Burkholde... [more]
NUOB_BURCH4.427e-1972.22NADH-quinone oxidoreductase subunit B OS=Burkholde... [more]
NUOB_BURCC4.427e-1972.22NADH-quinone oxidoreductase subunit B OS=Burkholde... [more]
NUOB_BURCA4.427e-1972.22NADH-quinone oxidoreductase subunit B OS=Burkholde... [more]
NUOB_BURA44.427e-1972.22NADH-quinone oxidoreductase subunit B OS=Burkholde... [more]
NUOB_AZOSE4.427e-1972.22NADH-quinone oxidoreductase subunit B OS=Azoarcus ... [more]
NUOB1_BURPS4.427e-1972.22NADH-quinone oxidoreductase subunit B 1 OS=Burkhol... [more]
NUOB1_BURP64.427e-1972.22NADH-quinone oxidoreductase subunit B 1 OS=Burkhol... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0005K06_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005K06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191687 ID=CN191687; Name=CN191687; organism=Citrus sinensis; type=EST; length=515bp
GCTAAATCCCAATACTACCGGAGAGAGTAACCACCACTTTCAAACCCCAA
CAACAATCAATTTCTCTCTCGCTTTGCCCCCGTGTGAGAAAACTAAACCA
AACCAAACCAAACCCCACCCCACAACCCCCAAAACACAAGCCCAAAAAAA
AAAAACTATGGCGGTACTCACCAAAAACACTGCCACGCGCCTCCCTCTCC
TCCTCTCGCAACGCGCCGCCTGTCTCCACACGACCGTCCCCTCTCTCTCC
TCGGCCTCCGGCTCCTCCTCCTCCTCCTCGCAGCCCACCTCCTACGCTCG
CCCTCCACCGCCCTCGACCACAAGTCCAGGCGGTATCTCAAAGACGGCGG
AATTCGTGATCTCTAAATTGGATGATGTCGTCAACTATATTCGTCGCGGC
TCCATCTGGCCCATGTCCTTCGGGCTGGCCTGCTGCGCCGTCGAGATGAT
GCACACCGGTGCTGCTCGTTACGATTTAGATCGATTCGGTATCATTTTCA
GGCCCAGCCCTCGCC
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