CN191680

Overview
NameCN191680
Unique NameCN191680
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length900
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN191680 vs. ExPASy Swiss-Prot
Match: KPYK_BACLI (Pyruvate kinase OS=Bacillus licheniformis GN=pyk PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.001e-31
Identity = 76/208 (36.54%), Postives = 119/208 (57.21%), Query Frame = -3
Query:  278 DLGAELQIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPVSITPPTQFSAHKSHMGDMFAFHSTTMANTLNTPIIVF-TRTGSMAVILSHYRPSSTIFAFTNQERIKQRLVLYQGVMPIYMQFSDDVEETFSRAIKLLMDKNLVTKGEFVTL 898
            DLG E+  E+VPL+Q+++I++C ++ KPVI AT ML+SM  +P PTRAE SD+A A+ +G DA+MLSGETA G +P++AV+ MH +A R+E +L        +       + D         A  L+   IV  T +G  A ++S YRP + I A T  + + ++L L  GV     Q     +E   +A++  +D  +V  G+ + +
Sbjct:  246 DLGVEIPAEEVPLVQKELIKKCNALGKPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTDAIMLSGETAAGNYPVEAVQTMHNIASRSEEALNHKKILSARSKQVSMSITDAIGQSVAHTAINLDVNAIVTPTESGHTARMISKYRPQAPIVAVTVNDAVSRKLSLVFGVFATSGQNHSSTDEMLEKAVQKSLDTGIVRHGDLIVI 453          
BLAST of CN191680 vs. ExPASy Swiss-Prot
Match: KPYK_BACSU (Pyruvate kinase OS=Bacillus subtilis GN=pyk PE=1 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.707e-31
Identity = 76/208 (36.54%), Postives = 119/208 (57.21%), Query Frame = -3
Query:  278 DLGAELQIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPVSITPPTQFSAHKSHMGDMFAFHSTTMANTLNTPIIVF-TRTGSMAVILSHYRPSSTIFAFTNQERIKQRLVLYQGVMPIYMQFSDDVEETFSRAIKLLMDKNLVTKGEFVTL 898
            DLG E+  E+VPL+Q+++I++C ++ KPVI AT ML+SM  +P PTRAE SD+A A+ +G DA+MLSGETA G +P++AV+ MH +A R+E +L        +       + D         A  LN   IV  T +G  A +++ YRP + I A T  + I ++L L  GV     Q +   +E    A++  ++  +V  G+ + +
Sbjct:  246 DLGVEIPAEEVPLVQKELIKKCNALGKPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTDAIMLSGETAAGSYPVEAVQTMHNIASRSEEALNYKEILSKRRDQVGMTITDAIGQSVAHTAINLNAAAIVTPTESGHTARMIAKYRPQAPIVAVTVNDSISRKLALVSGVFAESGQNASSTDEMLEDAVQKSLNSGIVKHGDLIVI 453          
BLAST of CN191680 vs. ExPASy Swiss-Prot
Match: KPYK_STAHJ (Pyruvate kinase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=pyk PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.487e-31
Identity = 76/219 (34.70%), Postives = 116/219 (52.97%), Query Frame = -3
Query:  278 DLGAELQIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPVSITPPTQFSAHKSHMGDMFAFHSTTMANTLNT------------PIIVFTRTGSMAVILSHYRPSSTIFAFTNQERIKQRLVLYQGVMPIYMQFSDDVEETFSRAIKLLMDKNLVTKGEFVTL 898
            D+G E+  E VP++Q+D+IR+C  + KPVI AT ML+SM  +P  TRAE SD+A A+ +G DAVMLSGETA G +P +AVK M  +A+  E++             +K  + D      T++ N +               I+  T +GS AV +S YRP S I A T  E   ++L L  G  P+  +     ++  + A+   ++   VT G+ + +
Sbjct:  246 DMGVEIPPESVPIVQKDLIRKCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGLYPEEAVKTMRNIAVSAEAA-----------QDYKKLLSDRTKLVETSLVNAIGVSVAHTALNLNVKAIVAATESGSTAVTISKYRPHSDIIAVTPSEHTARQLALVWGAYPVIKKGRKTTDDLLNNAVATAVETGRVTNGDLIII 453          
BLAST of CN191680 vs. ExPASy Swiss-Prot
Match: KPYK1_SYNY3 (Pyruvate kinase 1 OS=Synechocystis sp. (strain PCC 6803) GN=pyk1 PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.472e-31
Identity = 82/230 (35.65%), Postives = 131/230 (56.96%), Query Frame = -3
Query:  212 DLGAELQIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPVSITPPTQFSAHKSHMGDMFAFHSTTMANTLNTPIIVFTRTGSMAVILSHYRPSSTIFAFTNQERIKQRLVLYQGVMPIYM-QFSDDVEETFSRAIKLLMDKNLVTKGEFVTLVQSGAQPIWRQESTHHIQVRKV 898
            DLG E+  E VP LQ++IIRRC     PVI AT ML+SMI +  PTRAE SD+A A+ +G DAVMLSGE+A G++P+K+V+++  +A  TE  L +   PP + +   +    +               I+ FT +G  +++ S+ RPS  + AFT  E++   L L  G++P  + +  D  E+   +A  LL D+ +V KG+ + L+ +G  P      T+ +++ ++
Sbjct:  259 DLGVEVNPEKVPRLQKEIIRRCNVRAIPVITATQMLDSMIQNSRPTRAEASDVANAILDGTDAVMLSGESAVGQYPVKSVQMLRKIAEETEVGLHLVNNPPIENTETHALSEALVVIDGILDLKY----IVTFTTSGFTSLLASNQRPSVPVIAFTPSEKVYHSLNLVWGIIPFLINEEFDTFEDLIQQAEVLLRDRKMVEKGDQL-LIMAGI-PTKIPRGTNFLKIHRI 482          
BLAST of CN191680 vs. ExPASy Swiss-Prot
Match: KPYK_METEA (Pyruvate kinase OS=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) GN=pyk PE=3 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 1.445e-30
Identity = 81/209 (38.76%), Postives = 119/209 (56.94%), Query Frame = -3
Query:  275 DLGAELQIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPVSITPPTQFSAHKSHMGDMFAFHSTTMANTLN-TPIIVFTRTGSMAVILSHYRPSSTIFAFTNQERIKQRLVLYQGVMPIYMQFSDDVEETFSRAIKLLMDKNLVTKGEFVTLV 898
            DLG E+ +E VP +Q+ I R  R + KPV+VAT MLESMI  P PTRAEVSD+A AV EGADAVMLS E+A G FP++A+  M+ +A + E           Q S  +    D  A  +  +   L+   I+ +T +GS  + L+  RP++++ A T +    +RL +  GV PI  + + DV++   RA K  + +     G+ V +V
Sbjct:  243 DLGVEMPLEQVPGVQKRITRVARRLGKPVVVATQMLESMITSPVPTRAEVSDVATAVYEGADAVMLSAESAAGDFPVEAIGTMNRIAEQVERDALYWSILMAQRSEPEPTASDAIAAAAHQIVEALSLRSIMAWTHSGSTVLRLARARPNASVIALTPKRETARRLTMAWGVHPIVTKDASDVDDMAFRAAKFAVRERFAEIGDRVIIV 451          
BLAST of CN191680 vs. ExPASy Swiss-Prot
Match: KPYK1_AGRVI (Pyruvate kinase OS=Agrobacterium vitis GN=ttuE PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.445e-30
Identity = 87/230 (37.83%), Postives = 127/230 (55.22%), Query Frame = -3
Query:  221 DLGAELQIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESS---LPVSITPPTQFSAHKSHMGDMFAFHSTTMANTLNTPIIV-FTRTGSMAVILSHYRPSSTIFAFTNQERIKQRLVLYQGVMPIYMQFSDDVEETFSRAIKLLMDKNLVTKGEFVTLVQSGAQPIWRQESTHHIQV 898
            DLG E+  EDVP  Q+++IR CR   KPVIVAT ML+SM+  PTPTRAE SD+A A+ +GADAVMLS E+A G FP++ V++M  +  +TE      P+      Q +    H     A  +  +A  L  P+IV FT +G+ A  +S  RP   I A T  E+  ++L L  GV+ +     D  E++  RA +  +   L  K + + +V     P     ST++++V
Sbjct:  246 DLGVEIPPEDVPGRQKELIRACRIAAKPVIVATQMLDSMVTSPTPTRAEASDVAGAIYDGADAVMLSAESATGAFPVETVEIMSRIIEKTEKHKFYRPILEATEPQIAHTPPH---AVATAAADVALALKAPVIVAFTVSGTTASRISRARPPLPILALTPSEQTARQLGLMWGVVSLLSPTVDTYEQSVDRATQAAVQTGLAEKSDQIVVVT--GFPFATAGSTNNLRV 470          
BLAST of CN191680 vs. ExPASy Swiss-Prot
Match: KPYK_CLOPE (Pyruvate kinase OS=Clostridium perfringens GN=pykF PE=3 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.887e-30
Identity = 76/232 (32.76%), Postives = 131/232 (56.47%), Query Frame = -3
Query:  212 DLGAELQIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPVS--ITPPTQFSAHKSHMGDMFAFHSTTMANTLNT-PIIVFTRTGSMAVILSHYRPSSTIFAFTNQERIKQRLVLYQGVMPIYMQFSDDVEETFSRAIKLLMDKNLVTKGEFVTLVQSGAQPIWRQESTHHIQVRKV 898
            D+G E+ IE+VP++Q++II++C    K VI AT ML+SMI +P PTRAE SD+  A+ +G DA+MLSGE+A G FP++A   M  +A + E++L  +  +      + +     D  ++ ++  A+   T  I+  T+TGS A ILS Y+PS  I A T  E++++ L L  G++     + +  +E    A K+  +  +   G+   ++ +   P      T+ +++ K+
Sbjct:  245 DMGVEIPIENVPIIQKNIIKKCNQAGKIVITATQMLDSMIRNPRPTRAEASDVCNAIFDGTDAIMLSGESASGSFPIEAAMTMSRIAKKAEANLDYNYLLRRLKDPNPNPDAFADAISYSASKTASKFPTKAIVAATQTGSTAKILSKYKPSCPIIAITPYEKVRRSLALNFGIISKKCAYFNSTDEIIEEARKVAKEFEIAETGD--NIMVAAGFPTSITGGTNMLKIEKI 474          
BLAST of CN191680 vs. ExPASy Swiss-Prot
Match: KPYK_BACPY (Pyruvate kinase OS=Bacillus psychrophilus GN=pyk PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.492e-30
Identity = 75/230 (32.61%), Postives = 130/230 (56.52%), Query Frame = -3
Query:  212 DLGAELQIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPVSITPPTQFSAHKSHMGDMFAFHST-TMANTLNTPIIVFTRTGSMAVILSHYRPSSTIFAFTNQERIKQRLVLYQGVMPIYMQFSDDVEETFSRAIKLLMDKNLVTKGEFVTLVQSGAQPIWRQESTHHIQVRKV 898
            DLG E+  E+VPL+Q+++I +C    KPVI AT ML+SM  +P PTRAE SD+A A+ +G DA+MLSGETA G +P+++V+ M  +AL TE+++       T+      +M +     +  T  N     ++  T +G  A +++ YRP   + A T+ E   ++L L  GV PI  + +  ++E    +++  +    V  G+ V ++ +G  P+    +T+ +++  +
Sbjct:  246 DLGVEIPPEEVPLVQKNLIEKCNQAGKPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTDAIMLSGETAAGIYPVESVQTMDRIALTTEAAIDYRSVVSTRRREKHGNMTEAIGQAAAYTAINLKVKAVLAPTESGHTAKMIAKYRPGCPVIAVTSSEMCSRKLSLIWGVYPIVGKKASSIDEILQESVEESVKHQYVGHGD-VVIITAGV-PVGEAGTTNLMKIHVI 473          
BLAST of CN191680 vs. ExPASy Swiss-Prot
Match: KPYK_STAES (Pyruvate kinase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pyk PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.223e-29
Identity = 76/241 (31.54%), Postives = 126/241 (52.28%), Query Frame = -3
Query:  212 DLGAELQIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPVSITPPTQFSAHKSHMGDMFAFHSTTMANTLNT------------PIIVFTRTGSMAVILSHYRPSSTIFAFTNQERIKQRLVLYQGVMPIYMQFSDDVEETFSRAIKLLMDKNLVTKGEFVTLVQSGAQPIWRQESTHHIQVRKV 898
            D+G E+  E VP++Q+D+IR+C  + KPVI AT ML+SM  +P  TRAE SD+A A+ +G DAVMLSGETA G++P +AVK M  +A+  E++             +K  + D      T++ N +               I+  T +GS A  +S YRP S I A T  E+  ++  +  GV P+  +     +   + A+   ++   V+ G+ + +  +   P   + +T+ +++  V
Sbjct:  245 DMGVEIPPESVPMVQKDLIRKCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGQYPEEAVKTMRNIAVSAEAA-----------QDYKKLLSDRTKLVETSLVNAIGVSVAHTALNLNVKAIVAATESGSTARTISKYRPHSDIIAVTPSEKTARQCAIVWGVNPVVKEGRKTTDALLNNAVATAVETGRVSNGDLIII--TAGVPTGEKGTTNMMKIHLV 472          
BLAST of CN191680 vs. ExPASy Swiss-Prot
Match: KPYK_STAEQ (Pyruvate kinase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pyk PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.223e-29
Identity = 76/241 (31.54%), Postives = 126/241 (52.28%), Query Frame = -3
Query:  212 DLGAELQIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPVSITPPTQFSAHKSHMGDMFAFHSTTMANTLNT------------PIIVFTRTGSMAVILSHYRPSSTIFAFTNQERIKQRLVLYQGVMPIYMQFSDDVEETFSRAIKLLMDKNLVTKGEFVTLVQSGAQPIWRQESTHHIQVRKV 898
            D+G E+  E VP++Q+D+IR+C  + KPVI AT ML+SM  +P  TRAE SD+A A+ +G DAVMLSGETA G++P +AVK M  +A+  E++             +K  + D      T++ N +               I+  T +GS A  +S YRP S I A T  E+  ++  +  GV P+  +     +   + A+   ++   V+ G+ + +  +   P   + +T+ +++  V
Sbjct:  245 DMGVEIPPESVPMVQKDLIRKCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGQYPEEAVKTMRNIAVSAEAA-----------QDYKKLLSDRTKLVETSLVNAIGVSVAHTALNLNVKAIVAATESGSTARTISKYRPHSDIIAVTPSEKTARQCAIVWGVNPVVKEGRKTTDALLNNAVATAVETGRVSNGDLIII--TAGVPTGEKGTTNMMKIHLV 472          
The following BLAST results are available for this feature:
BLAST of CN191680 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
KPYK_BACLI1.001e-3136.54Pyruvate kinase OS=Bacillus licheniformis GN=pyk P... [more]
KPYK_BACSU1.707e-3136.54Pyruvate kinase OS=Bacillus subtilis GN=pyk PE=1 S... [more]
KPYK_STAHJ6.487e-3134.70Pyruvate kinase OS=Staphylococcus haemolyticus (st... [more]
KPYK1_SYNY38.472e-3135.65Pyruvate kinase 1 OS=Synechocystis sp. (strain PCC... [more]
KPYK_METEA1.445e-3038.76Pyruvate kinase OS=Methylobacterium extorquens (st... [more]
KPYK1_AGRVI1.445e-3037.83Pyruvate kinase OS=Agrobacterium vitis GN=ttuE PE=... [more]
KPYK_CLOPE1.887e-3032.76Pyruvate kinase OS=Clostridium perfringens GN=pykF... [more]
KPYK_BACPY5.492e-3032.61Pyruvate kinase OS=Bacillus psychrophilus GN=pyk P... [more]
KPYK_STAES1.223e-2931.54Pyruvate kinase OS=Staphylococcus epidermidis (str... [more]
KPYK_STAEQ1.223e-2931.54Pyruvate kinase OS=Staphylococcus epidermidis (str... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS06_0005K02_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005K02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191680 ID=CN191680; Name=CN191680; organism=Citrus sinensis; type=EST; length=900bp
TTTTTTTTTTTTTTGAAGCTTTATCAGTTCACCAATCTTTTACATAAAAG
AATTCAAAAAATAATAATAATTAGAGTCTTGGGCTCTCAAATTATTTTGG
AAAAATATACAGTTGCTAGACAGCTGACAATTAAATGGATATAAGCATCA
GCTAATCACCAGTACTAAATGTTATCAAAAATGAGTTTTCACAAGTAAGA
TATCAGCCTTGGACCTTACGAACTTGAATGTGGTGAGTAGATTCTTGACG
CCAGATTGGCTGCGCTCCACTCTGGACAAGAGTGACGAATTCTCCCTTTG
TAACCAGATTCTTATCCATTAATAACTTGATAGCTCGAGAGAATGTCTCC
TCCACGTCATCTGAAAACTGCATATATATGGGCATGACACCTTGATAAAG
CACCAGTCTCTGCTTAATTCTCTCTTGATTTGTGAAGGCAAAGATTGTTG
ATGAAGGCCGATAATGACTTAAAATTACTGCCATGGATCCTGTTCTTGTG
AATACAATTATGGGGGTATTGAGAGTGTTAGCCATAGTCGTTGAATGGAA
AGCAAACATATCACCCATGTGGCTCTTATGAGCACTAAACTGGGTTGGGG
GAGTAATGCTAACTGGCAGACTTGACTCAGTCCTCAATGCCACAGTATGC
ATAACTTTAACAGCTTTCAGCGGAAACTTTCCATGGGCAGTTTCTCCAGA
AAGCATGACTGCATCAGCGCCTTCCCGTACTGCAATTGCGATGTCCGAAA
CTTCTGCCCTTGTTGGTGTAGGATGATCAATCATACTCTCCAGCATGTTT
GTTGCCACAATTACGGGTTTTTGCATACTACGACACCTTCTAATGATATC
TTCCTGCAATAGTGGGACATCCTCAATTTGGAGTTCAGCTCCAAGGTCTC
back to top