CN191680

Overview
NameCN191680
Unique NameCN191680
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length900
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN191680 vs. ExPASy Swiss-Prot
Match: KPYK_AERPE (Pyruvate kinase OS=Aeropyrum pernix GN=pyk PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.389e-22
Identity = 61/174 (35.06%), Postives = 98/174 (56.32%), Query Frame = -3
Query:  377 DLGAELQIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPVSITPPTQFSAHKSHMGDMFAFHSTTMANTLNTPIIVFTRTGSMAVILSHYRPSSTIFAFTNQERIKQRLVLYQGVMPI 898
            DLG    +E++P +QE I+   R   K V++AT  L SMI+ P PTR+EV DI  AV + ADA+ML+GETA GK+P+K+V+ M  ++ R    L  S  PP +     +      A     +A +L++P++V+++TG  A  L+ ++P  T +       +++ +    G  PI
Sbjct:  238 DLGMHYSLEELPEIQELIVWEARKRYKTVVLATEFLSSMIEKPVPTRSEVVDIYQAVLQTADALMLTGETAIGKYPVKSVQWMAKISSRAYKKLATS--PPER--PRPTSTPYKLALGLVELAESLDSPLVVYSKTGRFAERLASFKPLKTFYVGVPSREVERVVRHLWGAEPI 407          
BLAST of CN191680 vs. ExPASy Swiss-Prot
Match: KPYK_METJA (Pyruvate kinase OS=Methanocaldococcus jannaschii GN=MJ0108 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.602e-21
Identity = 77/230 (33.48%), Postives = 124/230 (53.91%), Query Frame = -3
Query:  212 DLGAELQIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPVSITPPTQFSAHKSHMGDMFAFHSTTMANTLNTPIIVF-TRTGSMAVILSHYRPSSTIFAFTNQERIKQRLVLYQGVMPIYMQFSDDVEETFSRAIKLLMDKNLVTKGEFVTLVQSGAQPIWRQESTHHIQVRKV 898
            DLG E+ IE++P+ Q++I+R         I AT +L+SMI++P PTRAEV+DIA A+ +G D +MLS ET  GK+P++A+KV++ VA   +                    G ++A +   +   LNT +++  T +G  A ++S  R +S I A T   R  +RL L  GV    M+  DD+E+  +   +  M K  + KG ++  +     PI  Q+ T+ I+V  +
Sbjct:  227 DLGVEVPIENIPIEQKNILRIANRYGILSITATQILDSMINNPFPTRAEVTDIANAIYDGTDCLMLSNETTIGKYPIEAIKVLNKVAKVADEHYE-EFGDRVCLEVESIDEGLVYAVYE--LYKKLNTKLVITPTYSGRTAKLISKLRINSKIIAPTPNIRTLKRLRLVWGVESCLMEEFDDMEKIINTCRE--MAKKEIGKGIYLITL---GHPI-GQKKTNTIKVESI 447          
BLAST of CN191680 vs. ExPASy Swiss-Prot
Match: KPYK_PYRAE (Pyruvate kinase OS=Pyrobaculum aerophilum GN=pyk PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.086e-21
Identity = 60/192 (31.25%), Postives = 101/192 (52.60%), Query Frame = -3
Query:  323 DLGAELQIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPVSITPPTQFSAHKSHMGDMFAFHSTTMANTLNTPIIVFTRTGSMAVILSHYRPSSTIFAFTNQERIKQRLVLYQGVMPIYMQFSDDVEETFSRAIKL 898
            DLG    ++ +P++Q  I+       KP+ VAT +L+SM   P PTRAE++D+      G D++ L+ ETA GK+PL AV  +  + +  E  +P S  P  Q S       D FA     +A  L   I+VF+ +G++A  ++ +RP   ++  T   R+ + L +   + P+Y+  +++ EE   + I L
Sbjct:  256 DLGLHYGLDALPIVQRRIVHTSLKYGKPIAVATQLLDSMQSSPIPTRAEINDVFTTASMGVDSLWLTNETASGKYPLAAVSWLSRILMNVEYQIPQS--PLLQNSR------DRFAKGLVELAQDLGANILVFSMSGTLARRIAKFRPRGVVYVGTPNVRVARSLSIVWALEPLYIP-AENYEEGLEKLISL 438          
BLAST of CN191680 vs. ExPASy Swiss-Prot
Match: KPYK_MYCPN (Pyruvate kinase OS=Mycoplasma pneumoniae GN=pyk PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.895e-16
Identity = 46/92 (50.00%), Postives = 59/92 (64.13%), Query Frame = -3
Query:  623 DLGAELQIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTES 898
            DLG E+    VP  Q  +I+ CR   K VI AT ML+S+  +  PTRAEV+D+  AV  G DA MLSGETA+G FPL AV VM  +  ++E+
Sbjct:  275 DLGLEIPYYKVPYWQRYMIKACRFFNKRVITATQMLDSLEKNIQPTRAEVTDVYFAVDRGNDATMLSGETANGAFPLNAVYVMKMIDKQSET 366          
BLAST of CN191680 vs. ExPASy Swiss-Prot
Match: KPYK_ENCCU (Pyruvate kinase OS=Encephalitozoon cuniculi GN=PYK1 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.005e-15
Identity = 54/188 (28.72%), Postives = 95/188 (50.53%), Query Frame = -3
Query:  335 DLGAELQIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPVSITPPTQFSAHKSHMGDMFAFHSTTMANTLNTPIIVFTRTGSMAVILSHYRPSSTIFAFTNQERIKQRLVLYQGVMPIYMQFSDDVEETFSR 898
            DLG E+ +E++   Q+ I+   +   +PVI AT M+ESM     P R+E+SD+  AV +G D VMLS E+A G FP++ VK M ++                   A +  M       +  +++ ++  +++ + T S    +   +P + I   +    I +R  +Y+G++P+Y + S+D E T  R
Sbjct:  329 DLGVEIGLENMFSAQKRILYEVKREGRPVICATQMMESMTLKNAPNRSEISDVGNAVLDGCDCVMLSAESAVGMFPVETVKFMRSICA----------------DAERYDMESRKGAGACGVSSYVD-GVVICSGTESQIEKIYLSKPETPIIVISESLWILRRFSIYRGIIPVYGKGSEDAEATLRR 499          
BLAST of CN191680 vs. ExPASy Swiss-Prot
Match: KPYK_MYCGE (Pyruvate kinase OS=Mycoplasma genitalium GN=pyk PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.517e-15
Identity = 44/92 (47.83%), Postives = 57/92 (61.96%), Query Frame = -3
Query:  623 DLGAELQIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTES 898
            DLG E+    VP  Q  +I+ CR   K  I AT ML+S+  +  PTRAEV+D+  AV  G DA MLSGETA G +PL AV VM  +  ++E+
Sbjct:  275 DLGLEIPYYQVPYWQRYMIKACRFFNKRSITATQMLDSLEKNIQPTRAEVTDVYFAVDRGNDATMLSGETASGLYPLNAVAVMQKIDKQSET 366          
The following BLAST results are available for this feature:
BLAST of CN191680 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
KPYK_AERPE9.389e-2235.06Pyruvate kinase OS=Aeropyrum pernix GN=pyk PE=1 SV... [more]
KPYK_METJA1.602e-2133.48Pyruvate kinase OS=Methanocaldococcus jannaschii G... [more]
KPYK_PYRAE6.086e-2131.25Pyruvate kinase OS=Pyrobaculum aerophilum GN=pyk P... [more]
KPYK_MYCPN5.895e-1650.00Pyruvate kinase OS=Mycoplasma pneumoniae GN=pyk PE... [more]
KPYK_ENCCU1.005e-1528.72Pyruvate kinase OS=Encephalitozoon cuniculi GN=PYK... [more]
KPYK_MYCGE6.517e-1547.83Pyruvate kinase OS=Mycoplasma genitalium GN=pyk PE... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS06_0005K02_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005K02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191680 ID=CN191680; Name=CN191680; organism=Citrus sinensis; type=EST; length=900bp
TTTTTTTTTTTTTTGAAGCTTTATCAGTTCACCAATCTTTTACATAAAAG
AATTCAAAAAATAATAATAATTAGAGTCTTGGGCTCTCAAATTATTTTGG
AAAAATATACAGTTGCTAGACAGCTGACAATTAAATGGATATAAGCATCA
GCTAATCACCAGTACTAAATGTTATCAAAAATGAGTTTTCACAAGTAAGA
TATCAGCCTTGGACCTTACGAACTTGAATGTGGTGAGTAGATTCTTGACG
CCAGATTGGCTGCGCTCCACTCTGGACAAGAGTGACGAATTCTCCCTTTG
TAACCAGATTCTTATCCATTAATAACTTGATAGCTCGAGAGAATGTCTCC
TCCACGTCATCTGAAAACTGCATATATATGGGCATGACACCTTGATAAAG
CACCAGTCTCTGCTTAATTCTCTCTTGATTTGTGAAGGCAAAGATTGTTG
ATGAAGGCCGATAATGACTTAAAATTACTGCCATGGATCCTGTTCTTGTG
AATACAATTATGGGGGTATTGAGAGTGTTAGCCATAGTCGTTGAATGGAA
AGCAAACATATCACCCATGTGGCTCTTATGAGCACTAAACTGGGTTGGGG
GAGTAATGCTAACTGGCAGACTTGACTCAGTCCTCAATGCCACAGTATGC
ATAACTTTAACAGCTTTCAGCGGAAACTTTCCATGGGCAGTTTCTCCAGA
AAGCATGACTGCATCAGCGCCTTCCCGTACTGCAATTGCGATGTCCGAAA
CTTCTGCCCTTGTTGGTGTAGGATGATCAATCATACTCTCCAGCATGTTT
GTTGCCACAATTACGGGTTTTTGCATACTACGACACCTTCTAATGATATC
TTCCTGCAATAGTGGGACATCCTCAATTTGGAGTTCAGCTCCAAGGTCTC
back to top