CN191675

Overview
NameCN191675
Unique NameCN191675
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length764
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN191675 vs. ExPASy Swiss-Prot
Match: AGL8_SOLTU (Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.724e-38
Identity = 48/68 (70.59%), Postives = 61/68 (89.71%), Query Frame = 2
Query:    2 RVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQK 205
            RV+LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEV LI+FS +GKL+E+ + S M + LERY++
Sbjct:    5 RVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSCMERLLERYER 72          

HSP 2 Score: 77.411 bits (189), Expect = 2.724e-38
Identity = 38/81 (46.91%), Postives = 58/81 (71.60%), Query Frame = 1
Query:  271 EYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME 513
            E+ KLKAR E LQR+Q++ +GE+L  LN KEL++LE QLD +LK IRS + Q M ++++ LQ +++ L E N  L +++ E
Sbjct:   94 EHAKLKARLEVLQRNQKHYVGEDLESLNMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKE 174          
BLAST of CN191675 vs. ExPASy Swiss-Prot
Match: AGL8_SOLLC (Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum GN=TDR4 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 4.631e-38
Identity = 48/68 (70.59%), Postives = 61/68 (89.71%), Query Frame = 2
Query:    2 RVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQK 205
            RV+LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEV LI+FS +GKL+E+ + S M + LERY++
Sbjct:    5 RVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSCMERILERYER 72          

HSP 2 Score: 76.6406 bits (187), Expect = 4.631e-38
Identity = 38/81 (46.91%), Postives = 58/81 (71.60%), Query Frame = 1
Query:  271 EYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME 513
            E+ KLKAR E LQR+Q++ +GE+L  L+ KEL++LE QLD +LK IRS + Q M ++++ LQ K++ L E N  L +++ E
Sbjct:   94 EHRKLKARLEVLQRNQKHYVGEDLESLSMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKKDRALQEQNNQLSKKVKE 174          
BLAST of CN191675 vs. ExPASy Swiss-Prot
Match: AGL8_SOLCO (Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii GN=SCM1 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 4.144e-36
Identity = 48/68 (70.59%), Postives = 61/68 (89.71%), Query Frame = 2
Query:    2 RVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQK 205
            RV+LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEV LI+FS +GKL+E+ + S M + LERY++
Sbjct:    5 RVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYATDSCMERLLERYER 72          

HSP 2 Score: 70.0922 bits (170), Expect = 4.144e-36
Identity = 36/81 (44.44%), Postives = 55/81 (67.90%), Query Frame = 1
Query:  271 EYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME 513
            E  KLKAR E LQR+++  +GE+L  LN KEL++LE QL  +LK IRS + Q M ++++ LQ +++ L E N  L +++ E
Sbjct:   94 ENAKLKARLEVLQRNEKLYVGEDLESLNMKELQNLEHQLASALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKE 174          
BLAST of CN191675 vs. ExPASy Swiss-Prot
Match: MAD21_ORYSJ (MADS-box transcription factor 21 OS=Oryza sativa subsp. japonica GN=MADS21 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.392e-36
Identity = 47/70 (67.14%), Postives = 63/70 (90.00%), Query Frame = 2
Query:    2 RVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKST 211
            ++E+KRIENK +RQVTF KRRNGLLKKAYEL++LCDAE+ALI+FS+RG+LYEF + +S   T+ERY+K++
Sbjct:    5 KIEIKRIENKTSRQVTFCKRRNGLLKKAYELAILCDAEIALIVFSSRGRLYEFSNVNSTRSTIERYKKAS 74          

HSP 2 Score: 67.781 bits (164), Expect = 5.392e-36
Identity = 43/141 (30.50%), Postives = 74/141 (52.48%), Query Frame = 1
Query:  265 QQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDTFFHALECEPT---LQIGYQPADPISVVTA 678
            QQE  K++ + + LQ + R+L+GE +G + +KEL+SLE +L+  + +IRS + + +   +  +Q +E  L   N  L+ ++ E  +        +AED      PA   G +    LE  P     +  YQPA P+S++ A
Sbjct:   93 QQEAAKMRHQIQTLQNANRHLIGESIGNMTAKELKSLENRLEKGISRIRSKKHELLFSEIEYMQKREADLQNENMFLRAKVAEAERAEH-DDQQAAEDDEMAPAPAVGGGSSSGTELEALPATFDTREYYQPAPPVSMLAA 232          
BLAST of CN191675 vs. ExPASy Swiss-Prot
Match: AGL13_ARATH (Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana GN=AGL13 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 2.025e-35
Identity = 49/68 (72.06%), Postives = 60/68 (88.24%), Query Frame = 2
Query:    2 RVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQK 205
            +VE+KRIENKI RQVTF+KR++GLLKKAYELSVLCDAEV+LIIFS  GKLYEF S+  + +T+ERY +
Sbjct:    5 KVEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEF-SNVGVGRTIERYYR 71          

HSP 2 Score: 74.3294 bits (181), Expect = 2.025e-35
Identity = 42/98 (42.86%), Postives = 63/98 (64.29%), Query Frame = 1
Query:  265 QQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRL----MEGYQVNTLQLNP 546
            +QE  KLK +YE+L R+ RNL+GE+L  ++ KEL++LERQL+ +L   R  +TQ M++ + EL+ KE+ L + N  LK        +G+Q   L LNP
Sbjct:   89 RQEVTKLKCKYESLLRTHRNLVGEDLEGMSIKELQTLERQLEGALSATRKQKTQVMMEQMEELRRKERELGDINNKLKLETEDHDFKGFQ--DLLLNP 184          
BLAST of CN191675 vs. ExPASy Swiss-Prot
Match: AG_BRANA (Floral homeotic protein AGAMOUS OS=Brassica napus GN=AG1 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 7.589e-35
Identity = 51/75 (68.00%), Postives = 66/75 (88.00%), Query Frame = 2
Query:    2 RVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKSTMEHQN 226
            ++E+KRIEN  NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ S++S+  T+ERY+K+  ++ N
Sbjct:   21 KIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-SNNSVKGTIERYKKAISDNSN 94          

HSP 2 Score: 63.1586 bits (152), Expect = 7.589e-35
Identity = 36/114 (31.58%), Postives = 63/114 (55.26%), Query Frame = 1
Query:  265 QQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVN-TLQLNPSAEDCGYGLKPAQPQGDTF 603
            QQE  KL+ +  ++Q S R L+GE +G ++ KEL +LE +LD S+ +IRS + + +   +  +Q +E  L   N+ L+ ++ E  + N ++ L P   +    + P Q Q   F
Sbjct:  107 QQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLDRSVNRIRSKKNELLFAEIDYMQKREVDLHNDNQLLRAKIAENERNNPSMSLMPGGSNYEQIMPPPQTQPQPF 220          
BLAST of CN191675 vs. ExPASy Swiss-Prot
Match: AG_ARATH (Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG PE=1 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 7.589e-35
Identity = 51/75 (68.00%), Postives = 66/75 (88.00%), Query Frame = 2
Query:    2 RVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKSTMEHQN 226
            ++E+KRIEN  NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ S++S+  T+ERY+K+  ++ N
Sbjct:   21 KIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-SNNSVKGTIERYKKAISDNSN 94          

HSP 2 Score: 63.1586 bits (152), Expect = 7.589e-35
Identity = 35/114 (30.70%), Postives = 63/114 (55.26%), Query Frame = 1
Query:  265 QQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVN-TLQLNPSAEDCGYGLKPAQPQGDTF 603
            QQE  KL+ +  ++Q S R L+GE +G ++ KEL +LE +L+ S+ +IRS + + +   +  +Q +E  L   N+ L+ ++ E  + N ++ L P   +    + P Q Q   F
Sbjct:  107 QQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLERSITRIRSKKNELLFSEIDYMQKREVDLHNDNQILRAKIAENERNNPSISLMPGGSNYEQLMPPPQTQSQPF 220          
BLAST of CN191675 vs. ExPASy Swiss-Prot
Match: AGL1_ARATH (Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana GN=AGL1 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.708e-34
Identity = 50/75 (66.67%), Postives = 64/75 (85.33%), Query Frame = 2
Query:    2 RVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKSTMEHQN 226
            ++E+KRIEN  NRQVTF KRRNGLLKKAYELSVLCDAEVAL+IFS RG+LYE+ +++S+  T+ERY+K+  +  N
Sbjct:   20 KIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEY-ANNSVRGTIERYKKACSDAVN 93          

HSP 2 Score: 64.3142 bits (155), Expect = 3.708e-34
Identity = 35/105 (33.33%), Postives = 60/105 (57.14%), Query Frame = 1
Query:  235 SAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPS 549
            S  EA     QQE  KL+ +   +Q S R+++GE LG LN KEL++LE +L+  + ++RS + + ++  +  +Q +E  L   N  L+ ++ EG ++N  Q   S
Sbjct:   96 SVTEANTQYYQQEASKLRRQIRDIQNSNRHIVGESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVAEIEYMQKREMELQHNNMYLRAKIAEGARLNPDQQESS 200          
BLAST of CN191675 vs. ExPASy Swiss-Prot
Match: AG_PANGI (Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.068e-33
Identity = 50/75 (66.67%), Postives = 64/75 (85.33%), Query Frame = 2
Query:    2 RVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKSTMEHQN 226
            ++E+KRIEN  NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS RG+LYE+ +++S+  T+ERY+K+  +  N
Sbjct:   21 KIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEY-ANNSVKGTIERYKKACTDSPN 94          

HSP 2 Score: 62.003 bits (149), Expect = 1.068e-33
Identity = 39/122 (31.97%), Postives = 66/122 (54.10%), Query Frame = 1
Query:  226 PNVSA-REALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNT-LQLNPSAEDCGYGLKPAQ 585
            PN S+  EA     QQE  KL+    ++Q++ RN++GE LG L  ++L+ LE +L+  + +IRS + + +   +  +Q KE  L   N+ L+ ++ E  +    + L P + D  Y L P Q
Sbjct:   93 PNTSSVSEANAQFYQQEASKLRQEISSIQKNNRNMMGESLGSLTVRDLKGLETKLEKGISRIRSKKNELLFAEIEYMQKKEIDLHNNNQYLRAKIAENERAQQHMNLMPGSSD--YELAPPQ 212          
BLAST of CN191675 vs. ExPASy Swiss-Prot
Match: AG_PETHY (Floral homeotic protein AGAMOUS OS=Petunia hybrida GN=AG1 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.811e-33
Identity = 50/75 (66.67%), Postives = 65/75 (86.67%), Query Frame = 2
Query:    2 RVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKSTMEHQN 226
            ++E+KRIEN  NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ +++S+  T+ERY+K+  +  N
Sbjct:   21 KIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVKATIERYKKACSDSSN 94          

HSP 2 Score: 60.077 bits (144), Expect = 1.811e-33
Identity = 37/121 (30.58%), Postives = 62/121 (51.24%), Query Frame = 1
Query:  235 SAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGD 597
            S  EA     QQE  KL+A+   LQ   RN LGE L  LN ++L +LE++++  + +IR+ + + +   +  +Q +E  L   N+ L+ ++ E  +   + L P +    Y L P Q   D
Sbjct:   97 SIAEANAQYYQQEASKLRAQIGNLQNQNRNFLGESLAALNLRDLRNLEQKIEKGISKIRAKKNELLFAEIEYMQKREIDLHNNNQYLRAKIAETERSQQMNLMPGSS--SYDLVPPQQSFD 215          
The following BLAST results are available for this feature:
BLAST of CN191675 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
AGL8_SOLTU2.724e-3870.59Agamous-like MADS-box protein AGL8 homolog OS=Sola... [more]
AGL8_SOLLC4.631e-3870.59Agamous-like MADS-box protein AGL8 homolog OS=Sola... [more]
AGL8_SOLCO4.144e-3670.59Agamous-like MADS-box protein AGL8 homolog OS=Sola... [more]
MAD21_ORYSJ5.392e-3667.14MADS-box transcription factor 21 OS=Oryza sativa s... [more]
AGL13_ARATH2.025e-3572.06Agamous-like MADS-box protein AGL13 OS=Arabidopsis... [more]
AG_BRANA7.589e-3568.00Floral homeotic protein AGAMOUS OS=Brassica napus ... [more]
AG_ARATH7.589e-3568.00Floral homeotic protein AGAMOUS OS=Arabidopsis tha... [more]
AGL1_ARATH3.708e-3466.67Agamous-like MADS-box protein AGL1 OS=Arabidopsis ... [more]
AG_PANGI1.068e-3366.67Floral homeotic protein AGAMOUS OS=Panax ginseng G... [more]
AG_PETHY1.811e-3366.67Floral homeotic protein AGAMOUS OS=Petunia hybrida... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0005J22_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005J22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191675 ID=CN191675; Name=CN191675; organism=Citrus sinensis; type=EST; length=764bp
GAGGGTTGAGTTGAAGAGGATAGAGAACAAGATCAACAGGCAAGTGACCT
TTGCAAAGAGAAGAAATGGCCTATTGAAGAAAGCTTATGAGCTTTCCGTT
CTTTGTGATGCTGAGGTTGCTCTCATCATTTTCTCCAATAGAGGAAAGCT
GTACGAGTTTTGCAGTAGTTCAAGCATGCTCAAAACGCTTGAGAGGTACC
AGAAGTCAACTATGGAGCACCAGAACCGAATGTGTCCGCAAGGGAGGCCC
TGGAGCTAAGTAGCCAGCAAGAATATCTGAAGCTTAAAGCACGATATGAA
GCCCTACAGAGATCCCAAAGGAATCTCCTTGGAGAAGAACTTGGCCCTCT
AAACAGCAAAGAGCTTGAGTCACTTGAAAGGCAGCTTGATATGTCATTGA
AGCAGATCAGATCAACAAGAACTCAGTACATGCTGGATACCCTTACTGAA
CTGCAACATAAGGAACAGTTGCTGAGCGAAGCAAATAAGACCCTCAAACA
AAGGTTGATGGAGGGATACCAAGTGAACACACTTCAATTGAATCCTAGTG
CAGAAGATTGTGGTTATGGGCTTAAACCAGCTCAACCTCAGGGCGATACC
TTCTTTCACGCCTTGGAATGTGAACCCACATTGCAAATTGGATACCAGCC
TGCGGACCCAATATCGGTTGTCACAGCAGGCCCGAGTCTGAATAATTACA
TGCAAGGATGGCTACCATGCTAAGAGAGCGGCGGGCATTACCAGTCAATG
TATTGCAGTTGATC
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