CN191625
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN191625 vs. ExPASy Swiss-Prot
Match: RS5_GEOTN (30S ribosomal protein S5 OS=Geobacillus thermodenitrificans (strain NG80-2) GN=rpsE PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.276e-13 Identity = 47/122 (38.52%), Postives = 70/122 (57.38%), Query Frame = 2 Query: 320 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDV 685 +L++ V+ I V K + G+R RF A VVVGD +GHVG G ++EV AIR AI AK +++ V +G T+P +V G G+ + + PA G G++A + VL+ AGI D+ Sbjct: 10 ELEERVVAINRVAKVVKGGRRLRFSALVVVGDKNGHVGFGTGKAQEVPEAIRKAIEDAKKNLMEV------PIVGT--TIPHEVIGHFGAGEIILKPASEGTGVIAGGPARAVLELAGISDI 123
BLAST of CN191625 vs. ExPASy Swiss-Prot
Match: RS5_FUSNN (30S ribosomal protein S5 OS=Fusobacterium nucleatum subsp. nucleatum GN=rpsE PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.276e-13 Identity = 37/123 (30.08%), Postives = 69/123 (56.10%), Query Frame = 2 Query: 317 HKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDV 685 ++ +++++KI V K T+ G+ F VGD +G +GLG+ + V AIR AI AK +++ + + +T+P ++ GK G+ T+ M PA G G++A +++L+ G+ D+ Sbjct: 7 NQYQEKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIVKISL--------KNNTIPHEIAGKWGATTLWMAPAYEGTGVIAGSASREILELVGVHDI 121
BLAST of CN191625 vs. ExPASy Swiss-Prot
Match: RS5_BACLD (30S ribosomal protein S5 OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=rpsE PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.276e-13 Identity = 43/122 (35.25%), Postives = 71/122 (58.20%), Query Frame = 2 Query: 320 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDV 685 +L++ ++ + V K + G+R RF A VVVGD +GHVG G ++EV AIR A+ AK ++I V +G T+P ++ G+ G+ + + PA G G++A + VL+ AG+ D+ Sbjct: 12 ELEERLVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIRKAVEDAKKNLIEV------PMVGT--TIPHEIIGRFGAGNILLKPASEGTGVIAGGPVRAVLELAGVSDI 125
BLAST of CN191625 vs. ExPASy Swiss-Prot
Match: RS5_ANOFW (30S ribosomal protein S5 OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=rpsE PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.276e-13 Identity = 47/122 (38.52%), Postives = 70/122 (57.38%), Query Frame = 2 Query: 320 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDV 685 +L++ V+ + V K + G+R RF A VVVGD +GHVG G ++EV AIR AI AK ++I V +G T+P +V G G+ + + PA G G++A + VL+ AGI D+ Sbjct: 10 ELEERVVAVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPDAIRKAIEDAKKNLITV------PIVGT--TIPHEVIGHFGAGEIILKPASEGTGVIAGGPARAVLELAGISDI 123
BLAST of CN191625 vs. ExPASy Swiss-Prot
Match: RS5_LYSSC (30S ribosomal protein S5 OS=Lysinibacillus sphaericus (strain C3-41) GN=rpsE PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.972e-13 Identity = 47/122 (38.52%), Postives = 70/122 (57.38%), Query Frame = 2 Query: 320 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDV 685 +L++ V+ I V K + G+R RF A VVVGD +GHVG G ++EV AIR A+ AK +++ V R +G T P V G+ G+ + + PA G G++A + VL+ AGI D+ Sbjct: 11 ELEERVVTINRVAKVVKGGRRFRFTALVVVGDRNGHVGFGTGKAQEVPDAIRKAVEDAKKNLVEVPR------VG--GTTPHLVLGRFGAGEILIKPAAPGTGVIAGGPVRAVLELAGITDI 124
BLAST of CN191625 vs. ExPASy Swiss-Prot
Match: RS5_LACC3 (30S ribosomal protein S5 OS=Lactobacillus casei (strain ATCC 334) GN=rpsE PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.972e-13 Identity = 46/121 (38.02%), Postives = 68/121 (56.20%), Query Frame = 2 Query: 323 LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDV 685 L+D+V+ I V K + G+R RF A +VGD +GHVG ++EV AIR A+ AK S+I V +G T+P +V G G+ V + PA G+G+ A + V++ AGI D+ Sbjct: 12 LEDQVVSINRVTKVVKGGRRLRFAAIAIVGDKNGHVGFATGKAQEVPEAIRKAVDAAKKSLIEV------PIVGT--TIPHEVIGHFGAGEVLLKPAEEGSGVAAGGAIRSVMELAGIADI 124
BLAST of CN191625 vs. ExPASy Swiss-Prot
Match: RS5_CLOAB (30S ribosomal protein S5 OS=Clostridium acetobutylicum GN=rpsE PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.972e-13 Identity = 47/121 (38.84%), Postives = 71/121 (58.68%), Query Frame = 2 Query: 323 LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDV 685 LK++V+ I V K + G+ RF A VVVGD +GHVG+G S E+ AIR I AK +++ V +G TVP ++ G+ G+ V ++PA G G++A + VL+ AG++DV Sbjct: 10 LKEKVVFINRVAKVVKGGRNFRFTALVVVGDENGHVGVGTGKSAEIPEAIRKGIEDAKKNLVEVA------IVGT--TVPHEIYGEFGTGRVLIMPASEGTGVIAGGPVRAVLELAGLNDV 122
BLAST of CN191625 vs. ExPASy Swiss-Prot
Match: RS5_BACHK (30S ribosomal protein S5 OS=Bacillus thuringiensis subsp. konkukian GN=rpsE PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.972e-13 Identity = 47/122 (38.52%), Postives = 69/122 (56.56%), Query Frame = 2 Query: 320 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDV 685 +L++ V+ I V K + G+R RF A VVVGD +GHVG G ++EV AIR AI AK ++I V +G T+P + G G+ V + PA G G++A + VL+ AG+ D+ Sbjct: 10 ELEERVVTINRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPDAIRKAIEDAKKNLIAV------PLVGT--TIPHTINGHFGAGEVFLKPAAEGTGVIAGGPVRAVLELAGVQDI 123
BLAST of CN191625 vs. ExPASy Swiss-Prot
Match: RS5_BACCZ (30S ribosomal protein S5 OS=Bacillus cereus (strain ZK / E33L) GN=rpsE PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.972e-13 Identity = 47/122 (38.52%), Postives = 69/122 (56.56%), Query Frame = 2 Query: 320 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDV 685 +L++ V+ I V K + G+R RF A VVVGD +GHVG G ++EV AIR AI AK ++I V +G T+P + G G+ V + PA G G++A + VL+ AG+ D+ Sbjct: 10 ELEERVVTINRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPDAIRKAIEDAKKNLIAV------PLVGT--TIPHTINGHFGAGEVFLKPAAEGTGVIAGGPVRAVLELAGVQDI 123
BLAST of CN191625 vs. ExPASy Swiss-Prot
Match: RS5_BACCR (30S ribosomal protein S5 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=rpsE PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.972e-13 Identity = 47/122 (38.52%), Postives = 69/122 (56.56%), Query Frame = 2 Query: 320 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDV 685 +L++ V+ I V K + G+R RF A VVVGD +GHVG G ++EV AIR AI AK ++I V +G T+P + G G+ V + PA G G++A + VL+ AG+ D+ Sbjct: 11 ELEERVVTINRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPDAIRKAIEDAKKNLIAV------PLVGT--TIPHTINGHFGAGEVFLKPAAEGTGVIAGGPVRAVLELAGVQDI 124 The following BLAST results are available for this feature:
BLAST of CN191625 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 231
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN191625 ID=CN191625; Name=CN191625; organism=Citrus sinensis; type=EST; length=685bpback to top |