CN191625

Overview
NameCN191625
Unique NameCN191625
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length685
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN191625 vs. ExPASy Swiss-Prot
Match: RS5_BACC1 (30S ribosomal protein S5 OS=Bacillus cereus (strain ATCC 10987) GN=rpsE PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.972e-13
Identity = 47/122 (38.52%), Postives = 69/122 (56.56%), Query Frame = 2 
Query:  320 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDV 685
            +L++ V+ I  V K  + G+R RF A VVVGD +GHVG G   ++EV  AIR AI  AK ++I V        +G   T+P  + G  G+  V + PA  G G++A    + VL+ AG+ D+
Sbjct:   10 ELEERVVTINRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPDAIRKAIEDAKKNLIAV------PLVGT--TIPHTINGHFGAGEVFLKPAAEGTGVIAGGPVRAVLELAGVQDI 123
[Close]
BLAST of CN191625 vs. ExPASy Swiss-Prot
Match: RS5_BACAN (30S ribosomal protein S5 OS=Bacillus anthracis GN=rpsE PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.972e-13
Identity = 47/122 (38.52%), Postives = 69/122 (56.56%), Query Frame = 2 
Query:  320 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDV 685
            +L++ V+ I  V K  + G+R RF A VVVGD +GHVG G   ++EV  AIR AI  AK ++I V        +G   T+P  + G  G+  V + PA  G G++A    + VL+ AG+ D+
Sbjct:   10 ELEERVVTINRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPDAIRKAIEDAKKNLIAV------PLVGT--TIPHTINGHFGAGEVFLKPAAEGTGVIAGGPVRAVLELAGVQDI 123
[Close]
BLAST of CN191625 vs. ExPASy Swiss-Prot
Match: RS5_BACAH (30S ribosomal protein S5 OS=Bacillus thuringiensis (strain Al Hakam) GN=rpsE PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.972e-13
Identity = 47/122 (38.52%), Postives = 69/122 (56.56%), Query Frame = 2 
Query:  320 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDV 685
            +L++ V+ I  V K  + G+R RF A VVVGD +GHVG G   ++EV  AIR AI  AK ++I V        +G   T+P  + G  G+  V + PA  G G++A    + VL+ AG+ D+
Sbjct:   11 ELEERVVTINRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPDAIRKAIEDAKKNLIAV------PLVGT--TIPHTINGHFGAGEVFLKPAAEGTGVIAGGPVRAVLELAGVQDI 124
[Close]
BLAST of CN191625 vs. ExPASy Swiss-Prot
Match: RS5_STAHJ (30S ribosomal protein S5 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=rpsE PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.882e-13
Identity = 46/122 (37.70%), Postives = 67/122 (54.92%), Query Frame = 2 
Query:  320 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDV 685
            + ++ V+ I  V K  + G+R RF A VVVGD +G VG G   ++EV  AI+ A+  AK  ++ V R           T P  +TG+ GS +V M PA  G G++A    + VL+ AGI D+
Sbjct:   10 EFEERVVTINRVAKVVKGGRRFRFTALVVVGDKNGRVGFGTGKAQEVPEAIKKAVEAAKKDLVVVPR--------VEGTTPHTITGRYGSGSVFMKPAAPGTGVIAGGPVRAVLELAGITDI 123
[Close]
BLAST of CN191625 vs. ExPASy Swiss-Prot
Match: RS5_STAAW (30S ribosomal protein S5 OS=Staphylococcus aureus (strain MW2) GN=rpsE PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.882e-13
Identity = 46/122 (37.70%), Postives = 67/122 (54.92%), Query Frame = 2 
Query:  320 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDV 685
            + ++ V+ I  V K  + G+R RF A VVVGD +G VG G   ++EV  AI+ A+  AK  ++ V R           T P  +TG+ GS +V M PA  G G++A    + VL+ AGI D+
Sbjct:   10 EFEERVVTINRVAKVVKGGRRFRFTALVVVGDKNGRVGFGTGKAQEVPEAIKKAVEAAKKDLVVVPR--------VEGTTPHTITGRYGSGSVFMKPAAPGTGVIAGGPVRAVLELAGITDI 123
[Close]
BLAST of CN191625 vs. ExPASy Swiss-Prot
Match: RS5_STAAT (30S ribosomal protein S5 OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=rpsE PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.882e-13
Identity = 46/122 (37.70%), Postives = 67/122 (54.92%), Query Frame = 2 
Query:  320 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDV 685
            + ++ V+ I  V K  + G+R RF A VVVGD +G VG G   ++EV  AI+ A+  AK  ++ V R           T P  +TG+ GS +V M PA  G G++A    + VL+ AGI D+
Sbjct:   10 EFEERVVTINRVAKVVKGGRRFRFTALVVVGDKNGRVGFGTGKAQEVPEAIKKAVEAAKKDLVVVPR--------VEGTTPHTITGRYGSGSVFMKPAAPGTGVIAGGPVRAVLELAGITDI 123
[Close]
BLAST of CN191625 vs. ExPASy Swiss-Prot
Match: RS5_STAAS (30S ribosomal protein S5 OS=Staphylococcus aureus (strain MSSA476) GN=rpsE PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.882e-13
Identity = 46/122 (37.70%), Postives = 67/122 (54.92%), Query Frame = 2 
Query:  320 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDV 685
            + ++ V+ I  V K  + G+R RF A VVVGD +G VG G   ++EV  AI+ A+  AK  ++ V R           T P  +TG+ GS +V M PA  G G++A    + VL+ AGI D+
Sbjct:   10 EFEERVVTINRVAKVVKGGRRFRFTALVVVGDKNGRVGFGTGKAQEVPEAIKKAVEAAKKDLVVVPR--------VEGTTPHTITGRYGSGSVFMKPAAPGTGVIAGGPVRAVLELAGITDI 123
[Close]
BLAST of CN191625 vs. ExPASy Swiss-Prot
Match: RS5_STAAR (30S ribosomal protein S5 OS=Staphylococcus aureus (strain MRSA252) GN=rpsE PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.882e-13
Identity = 46/122 (37.70%), Postives = 67/122 (54.92%), Query Frame = 2 
Query:  320 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDV 685
            + ++ V+ I  V K  + G+R RF A VVVGD +G VG G   ++EV  AI+ A+  AK  ++ V R           T P  +TG+ GS +V M PA  G G++A    + VL+ AGI D+
Sbjct:   10 EFEERVVTINRVAKVVKGGRRFRFTALVVVGDKNGRVGFGTGKAQEVPEAIKKAVEAAKKDLVVVPR--------VEGTTPHTITGRYGSGSVFMKPAAPGTGVIAGGPVRAVLELAGITDI 123
[Close]
BLAST of CN191625 vs. ExPASy Swiss-Prot
Match: RS5_STAAN (30S ribosomal protein S5 OS=Staphylococcus aureus (strain N315) GN=rpsE PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.882e-13
Identity = 46/122 (37.70%), Postives = 67/122 (54.92%), Query Frame = 2 
Query:  320 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDV 685
            + ++ V+ I  V K  + G+R RF A VVVGD +G VG G   ++EV  AI+ A+  AK  ++ V R           T P  +TG+ GS +V M PA  G G++A    + VL+ AGI D+
Sbjct:   10 EFEERVVTINRVAKVVKGGRRFRFTALVVVGDKNGRVGFGTGKAQEVPEAIKKAVEAAKKDLVVVPR--------VEGTTPHTITGRYGSGSVFMKPAAPGTGVIAGGPVRAVLELAGITDI 123
[Close]
BLAST of CN191625 vs. ExPASy Swiss-Prot
Match: RS5_STAAM (30S ribosomal protein S5 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=rpsE PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.882e-13
Identity = 46/122 (37.70%), Postives = 67/122 (54.92%), Query Frame = 2 
Query:  320 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDV 685
            + ++ V+ I  V K  + G+R RF A VVVGD +G VG G   ++EV  AI+ A+  AK  ++ V R           T P  +TG+ GS +V M PA  G G++A    + VL+ AGI D+
Sbjct:   10 EFEERVVTINRVAKVVKGGRRFRFTALVVVGDKNGRVGFGTGKAQEVPEAIKKAVEAAKKDLVVVPR--------VEGTTPHTITGRYGSGSVFMKPAAPGTGVIAGGPVRAVLELAGITDI 123
The following BLAST results are available for this feature:
BLAST of CN191625 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 231
Match NameE-valueIdentityDescription
RS5_BACC12.972e-1338.5230S ribosomal protein S5 OS=Bacillus cereus (strai... [more]
RS5_BACAN2.972e-1338.5230S ribosomal protein S5 OS=Bacillus anthracis GN=... [more]
RS5_BACAH2.972e-1338.5230S ribosomal protein S5 OS=Bacillus thuringiensis... [more]
RS5_STAHJ3.882e-1337.7030S ribosomal protein S5 OS=Staphylococcus haemoly... [more]
RS5_STAAW3.882e-1337.7030S ribosomal protein S5 OS=Staphylococcus aureus ... [more]
RS5_STAAT3.882e-1337.7030S ribosomal protein S5 OS=Staphylococcus aureus ... [more]
RS5_STAAS3.882e-1337.7030S ribosomal protein S5 OS=Staphylococcus aureus ... [more]
RS5_STAAR3.882e-1337.7030S ribosomal protein S5 OS=Staphylococcus aureus ... [more]
RS5_STAAN3.882e-1337.7030S ribosomal protein S5 OS=Staphylococcus aureus ... [more]
RS5_STAAM3.882e-1337.7030S ribosomal protein S5 OS=Staphylococcus aureus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0005I13_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005I13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191625 ID=CN191625; Name=CN191625; organism=Citrus sinensis; type=EST; length=685bp
GAGGGTCGCCTCGCATTTTTCACTCTCCCAAAGCCCAAACCCTAGCTTCA
AACCCTAAACCCACAAGAACAAAACCATGGCTGAACGAGGTGGCGAGCGC
GGTGCATTCGGACGCGGCTTCGGCCGTGGTGGGCGGGGCGACCGTGGAGG
CCCACGTGGCCGTCGCCGCGCTGGACGCAGAGAGGAAGAAGAGAAGTGGG
TCCCAGTCACGAAACTCGGCCGTCTGGTGAGAGAAGGCAAGATCAGGAGC
CTCGAGCAAATCTACCTCCACTCGCTCCCAATCAAGGAGTATCAAATCAT
CGACACGCTTATCGGCCACAAATTGAAGGACGAGGTCATGAAGATCATGC
CGGTGCAGAAACAGACACGTGCCGGTCAGAGGACGAGGTTCAAGGCCTTC
GTCGTCGTCGGTGACACGGACGGCCACGTGGGTCTTGGCGTTAAGTGCTC
CAAAGAGGTTGCCACTGCCATCCGTGGCGCTATCATATTGGCGAAGCTGT
CGGTGATTCCGGTGAGAAGGGGTTACTGGGGTAACAAGATCGGGAGGCCA
CACACCGTGCCGTGTAAGGTGACCGGTAAGTGTGGCAGTGTCACCGTGAG
GATGGTTCCGGCCCCACGTGGTGCCGGAATTGTGGCGGCTAGGGTTCCAA
AGAAGGTGCTGCAGTTTGCTGGTATTGACGATGTT
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