DY257380
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257380 vs. ExPASy Swiss-Prot
Match: PSB2_PICGU (Probable proteasome subunit beta type-2 OS=Pichia guilliermondii GN=PRO2 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.944e-27 Identity = 65/160 (40.62%), Postives = 101/160 (63.12%), Query Frame = 1 Query: 127 EEKIMVLDSHKLIDASGEPGDRVQFTEFIQKNVSLYQFR-NGIPLTTAAAANFTRGELATALRNFF-FLGNILLAGYEKETG-PSLYYIDYIATLHKVDKGAFGYGSYFSLSMMDRHFHSGMSVEEAVNLVDKCILEIRSRLVVAPPNFVIKIDDKDGAR 597 ++K L+SH L+ SGE GD VQF E+IQ N LY R N L+ A A+F R +LAT++R+ + N+LLAGY+ TG PSL +IDY+ T ++ A GY ++ S++D+H+ GM+ E+ ++L+ KCI E+ +R+ + IK+ DK+G + Sbjct: 32 DDKTRQLNSHNLMAYSGEAGDTVQFAEYIQANTQLYTMRENDTELSPKATASFVRNQLATSIRSRKPYQVNVLLAGYDTNTGKPSLNWIDYLGTQVELPYAAHGYAGFYCTSLLDKHYKKGMNFEDGLDLLKKCIKELETRMPIDFKGCYIKVVDKEGIK 191
BLAST of DY257380 vs. ExPASy Swiss-Prot
Match: PSB2_YEAST (Proteasome component C11 OS=Saccharomyces cerevisiae GN=PRE1 PE=1 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 1.908e-26 Identity = 60/163 (36.81%), Postives = 97/163 (59.51%), Query Frame = 1 Query: 118 K*KEEKIMVLDSHKLIDASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRNFF-FLGNILLAGYEKETG-PSLYYIDYIATLHKVDKGAFGYGSYFSLSMMDRHFHSGMSVEEAVNLVDKCILEIRSRLVVAPPNFVIKIDDKDGARE 600 K ++K L H L+ +GE GD VQF E+IQ N+ LY R L+ A ++F R ELA ++R+ + N+L+ GY+K+ P LY IDY+ T ++ GA GY +++ S++D H+ M+ EE ++L+ C+ E+ R+ + ++KI DKDG R+ Sbjct: 29 KDSDDKTRQLSPHTLMSFAGEAGDTVQFAEYIQANIQLYSIREDYELSPQAVSSFVRQELAKSIRSRRPYQVNVLIGGYDKKKNKPELYQIDYLGTKVELPYGAHGYSGFYTFSLLDHHYRPDMTTEEGLDLLKLCVQELEKRMPMDFKGVIVKIVDKDGIRQ 191
BLAST of DY257380 vs. ExPASy Swiss-Prot
Match: PSB2_DROME (Probable proteasome subunit beta type-2 OS=Drosophila melanogaster GN=Prosbeta4R2 PE=1 SV=3) HSP 1 Score: 114.775 bits (286), Expect = 6.138e-25 Identity = 60/159 (37.74%), Postives = 96/159 (60.38%), Query Frame = 1 Query: 127 EEKIMVLDSHKLIDASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-NFFFLGNILLAGYEKETGPSLYYIDYIATLHKVDKGAFGYGSYFSLSMMDRHFHSGMSVEEAVNLVDKCILEIRSRLVVAPPNFVIKIDDKDGARE 600 + KI L ++ G+ GD +QFT+FI KN+ LY+ +G L+ +AA+FTR LA +R N + +LLAGY+ GP L+YID ++ G+GS F S++ R+++S +S E+A +L+ KC+LEI+ RL++ NF + + D G R+ Sbjct: 34 QSKIHRLSDFNMMATVGDGGDTIQFTDFISKNLHLYKISHGYHLSAKSAAHFTRKTLADYIRTNTRYQVAMLLAGYDAVEGPDLHYIDSYGAAQSINHAGHGWGSMFCGSILQRYWNSKLSQEDAYSLMKKCVLEIQRRLIINQRNFEVYVVDSKGMRK 192
BLAST of DY257380 vs. ExPASy Swiss-Prot
Match: PSB2_TRYBB (Proteasome subunit beta type-2 OS=Trypanosoma brucei brucei GN=PSB4 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.367e-24 Identity = 65/166 (39.16%), Postives = 98/166 (59.04%), Query Frame = 1 Query: 127 EEKIMVLDSHKLIDASGEPGDRVQFTEFIQKNVSLYQFR-NGIPLTTAAAANFTRGELATALRNF--FFLGNILLAGYEKE--------TGPSLYYIDYIATLHKVDKGAFGYGSYFSLSMMDRHFHSGMSVEEAVNLVDKCILEIRSRLVVAPPNFVIKIDDKDG 591 E+KI LDSHK++ +GE G R F E+++ N++L + R +G ++T A A+F R LA ALR+ + N LLAG++ TG LYY+DY+ TL +V G GYG+ F +M+DR + ++ +E V L+ KC E+ R+VV+ F+ K KDG Sbjct: 33 EDKITELDSHKVVACAGENGPRTHFVEYVKCNMALKKMREHGRMISTHATASFMRNTLAGALRSRDGLYPVNCLLAGFDVPASAEDDVATGAHLYYLDYLGTLQEVPYGCHGYGAPFVTAMLDRMWRPNLTAQEGVELMQKCCDEVNKRVVVSNNTFICKAVPKDG 198
BLAST of DY257380 vs. ExPASy Swiss-Prot
Match: PSB2_CRYNE (Probable proteasome subunit beta type-2 OS=Cryptococcus neoformans GN=CPR1 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.415e-21 Identity = 59/143 (41.26%), Postives = 82/143 (57.34%), Query Frame = 1 Query: 127 EEKIMVLDSHKLIDASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRNFF-FLGNILLAGYEKETG-PSLYYIDYIATLHKVDKGAFGYGSYFSLSMMDRHFHSGMSVEEAVNLVDKCILEIRSRLVV 549 E K+ L H + SGEPGD F E+I++N+ LY RN PL AA+ + R LA A+R+ + N+LL G++ T P LY+IDY+ T V A G G Y SLS MD+ ++ M +E V+L+ KCI E RL + Sbjct: 32 ENKLKTLGPHLAMAFSGEPGDTNNFAEYIERNMRLYNIRNHFPLLPPAASAWVRRTLAEAIRSRHPYAVNLLLGGFDTTTSKPHLYWIDYLGTKAIVPYAAHGMGVYVSLSTMDKWWYEDMDKKEGVDLLRKCIDETEKRLTI 174
BLAST of DY257380 vs. ExPASy Swiss-Prot
Match: PSB2_CAEEL (Proteasome subunit beta type-2 OS=Caenorhabditis elegans GN=pbs-4 PE=2 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 2.419e-13 Identity = 48/145 (33.10%), Postives = 78/145 (53.79%), Query Frame = 1 Query: 175 GEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRNF-FFLGNILLAGYE-KETGPSLYYIDYIATLHKVDKGAF-GYGSYFSLSMMDRHFHSGMSVEEAVNLVDKCILEIRSRLVVAPPNFVIKIDDKDGARE 600 GE GD QF ++ ++N+ LY RNG ++ + A +F R +A LR+ + ++L+ GY+ KE L +DY+A F G+ F ++MDR + M+ E + L++KCI E + R V P + + I DK G R+ Sbjct: 49 GEEGDVAQFGDWTKRNLQLYSVRNGYEVSPSCAHHFVRRSIAEGLRSQDHYTVDVLIGGYDDKEDKAFLGSVDYLANGLGQQPYLFRGFCGRFCYAIMDREYKKDMTEAEGLALMNKCIGEAKRRFVANIPGYKVVIIDKKGYRK 193 The following BLAST results are available for this feature:
BLAST of DY257380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >DY257380 ID=DY257380; Name=DY257380; organism=Citrus sinensis; type=EST; length=828bpback to top |