EG358256

Overview
NameEG358256
Unique NameEG358256
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length288
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHSB_SOLTU (Chalcone synthase 1B OS=Solanum tuberosum GN=CHS1B PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 2.977e-31
Identity = 62/70 (88.57%), Postives = 67/70 (95.71%), Query Frame = 1 
Query:   79 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M+TV+E RKAQRAEGPATI+AIGT+TP NCVDQSTYPDYYFRITNSEH T+LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVTVEEYRKAQRAEGPATILAIGTSTPSNCVDQSTYPDYYFRITNSEHKTELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHSA_SOLTU (Chalcone synthase 1A OS=Solanum tuberosum GN=CHS1A PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 2.977e-31
Identity = 62/70 (88.57%), Postives = 67/70 (95.71%), Query Frame = 1 
Query:   79 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M+TV+E RKAQRAEGPATI+AIGT+TP NCVDQSTYPDYYFRITNSEH T+LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVTVEEYRKAQRAEGPATILAIGTSTPSNCVDQSTYPDYYFRITNSEHKTELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHS1_SOLLC (Chalcone synthase 1 OS=Solanum lycopersicum GN=CHS1 PE=2 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 2.977e-31
Identity = 62/70 (88.57%), Postives = 67/70 (95.71%), Query Frame = 1 
Query:   79 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M+TV+E RKAQRAEGPATI+AIGT+TP NCVDQSTYPDYYFRITNSEH T+LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVTVEEYRKAQRAEGPATILAIGTSTPSNCVDQSTYPDYYFRITNSEHKTELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHSE_IPOPU (Chalcone synthase E OS=Ipomoea purpurea GN=CHSE PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 3.888e-31
Identity = 61/70 (87.14%), Postives = 68/70 (97.14%), Query Frame = 1 
Query:   79 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M+TV+EVRKAQRA+GPATIMAIGT+TP NCVDQSTYPDYYFRITNSEH+ +LKEKFKRMC+KSMIKKRYM
Sbjct:    1 MVTVEEVRKAQRAQGPATIMAIGTSTPQNCVDQSTYPDYYFRITNSEHLVELKEKFKRMCEKSMIKKRYM 70
[Close]
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHSE_IPONI (Chalcone synthase E OS=Ipomoea nil GN=CHSE PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 3.888e-31
Identity = 61/70 (87.14%), Postives = 68/70 (97.14%), Query Frame = 1 
Query:   79 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M+TV+EVRKAQRA+GPATIMAIGT+TP NCVDQSTYPDYYFRITNSEH+ +LKEKFKRMC+KSMIKKRYM
Sbjct:    1 MVTVEEVRKAQRAQGPATIMAIGTSTPQNCVDQSTYPDYYFRITNSEHLVELKEKFKRMCEKSMIKKRYM 70
[Close]
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHSY_HYPAN (Chalcone synthase OS=Hypericum androsaemum PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 8.663e-31
Identity = 60/70 (85.71%), Postives = 66/70 (94.29%), Query Frame = 1 
Query:   79 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M+TV+EVRKAQRAEGPAT+MAIGTA PPNCVDQ+TYPDYYFRITNSEH  +LKEKF+RMCDKS IKKRYM
Sbjct:    1 MVTVEEVRKAQRAEGPATVMAIGTAVPPNCVDQATYPDYYFRITNSEHKAELKEKFQRMCDKSQIKKRYM 70
[Close]
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHSD_PETHY (Chalcone synthase D OS=Petunia hybrida GN=CHSD PE=3 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 1.930e-30
Identity = 60/70 (85.71%), Postives = 67/70 (95.71%), Query Frame = 1 
Query:   79 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M+TV+EVR AQRAEGPAT++AIGTATP NCVDQSTYPDYYFRIT+SEH T+LKEKFKR+CDKSMIKKRYM
Sbjct:    1 MVTVEEVRNAQRAEGPATVLAIGTATPSNCVDQSTYPDYYFRITDSEHKTELKEKFKRICDKSMIKKRYM 70
[Close]
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHS6_IPOBA (Chalcone synthase DII OS=Ipomoea batatas GN=CHS-DII PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.930e-30
Identity = 61/70 (87.14%), Postives = 67/70 (95.71%), Query Frame = 1 
Query:   79 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M+TV+EVRKAQRAEGPATI+AIGTATP NCV+QSTYPDYYFRITNSEH T+LKEKF+RMCDKSMI KRYM
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTATPANCVNQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMITKRYM 70
[Close]
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHS3_CAMSI (Chalcone synthase 3 OS=Camellia sinensis GN=CHS3 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 3.292e-30
Identity = 59/70 (84.29%), Postives = 66/70 (94.29%), Query Frame = 1 
Query:   79 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M+TV++V +AQRA GPAT++AIGTATPPNCVDQSTYPDYYFRITNSEH  +LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVTVEDVWRAQRARGPATVLAIGTATPPNCVDQSTYPDYYFRITNSEHKVELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHS3_IPOBA (Chalcone synthase LF3 OS=Ipomoea batatas GN=CHS-LF3 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 4.299e-30
Identity = 61/70 (87.14%), Postives = 66/70 (94.29%), Query Frame = 1 
Query:   79 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M+TV EVRKAQRAEGPATI+AIGTATP NCV+QSTYPDYYFRITNSEH T+LKEKF+RMCDKSMI KRYM
Sbjct:    1 MVTVGEVRKAQRAEGPATILAIGTATPANCVNQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMITKRYM 70
The following BLAST results are available for this feature:
BLAST of EG358256 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CHSB_SOLTU2.977e-3188.57Chalcone synthase 1B OS=Solanum tuberosum GN=CHS1B... [more]
CHSA_SOLTU2.977e-3188.57Chalcone synthase 1A OS=Solanum tuberosum GN=CHS1A... [more]
CHS1_SOLLC2.977e-3188.57Chalcone synthase 1 OS=Solanum lycopersicum GN=CHS... [more]
CHSE_IPOPU3.888e-3187.14Chalcone synthase E OS=Ipomoea purpurea GN=CHSE PE... [more]
CHSE_IPONI3.888e-3187.14Chalcone synthase E OS=Ipomoea nil GN=CHSE PE=2 SV... [more]
CHSY_HYPAN8.663e-3185.71Chalcone synthase OS=Hypericum androsaemum PE=1 SV... [more]
CHSD_PETHY1.930e-3085.71Chalcone synthase D OS=Petunia hybrida GN=CHSD PE=... [more]
CHS6_IPOBA1.930e-3087.14Chalcone synthase DII OS=Ipomoea batatas GN=CHS-DI... [more]
CHS3_CAMSI3.292e-3084.29Chalcone synthase 3 OS=Camellia sinensis GN=CHS3 P... [more]
CHS3_IPOBA4.299e-3087.14Chalcone synthase LF3 OS=Ipomoea batatas GN=CHS-LF... [more]

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Properties
Property NameValue
Genbank description1e8 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0001e8, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358256 ID=EG358256; Name=EG358256; organism=Citrus sinensis; type=EST; length=288bp
ACGCGGGATACAAATTTATAAAGTATCAACAAGAGCTAGACAGGTCTCCG
GGAACCGTTGGATTGGAAGCAACAAACAATGTTGACCGTCGATGAAGTTC
GCAAGGCTCAACGTGCCGAAGGTCCGGCCACGATCATGGCCATTGGAACG
GCAACCCCTCCGAATTGTGTTGATCAAAGCACGTATCCGGATTATTATTT
TCGCATCACGAATAGTGAACACATGACTGATCTTAAAGAGAAATTCAAGC
GCATGTGTGACAAATCCATGATCAAGAAGCGATACATG
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