EG358256

Overview
NameEG358256
Unique NameEG358256
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length288
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHS5_PEA (Chalcone synthase 5 OS=Pisum sativum GN=CHS5 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 4.024e-28
Identity = 55/70 (78.57%), Postives = 65/70 (92.86%), Query Frame = 1
Query:   79 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M++V E+RKAQRAEGPATI+AIGTA P NCV+QSTYPD+YFRITNSEH T+LK+KF+RMCDKSMI +RYM
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFRITNSEHKTELKQKFQRMCDKSMINRRYM 70          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHS3_PEA (Chalcone synthase 3 OS=Pisum sativum GN=CHS3 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 4.024e-28
Identity = 55/70 (78.57%), Postives = 65/70 (92.86%), Query Frame = 1
Query:   79 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M++V E+RKAQRAEGPATI+AIGTA P NCV+QSTYPD+YFRITNSEH T+LK+KF+RMCDKSMI +RYM
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFRITNSEHKTELKQKFQRMCDKSMINRRYM 70          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHS1_MAIZE (Chalcone synthase WHP1 OS=Zea mays GN=WHP1 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 4.024e-28
Identity = 56/69 (81.16%), Postives = 63/69 (91.30%), Query Frame = 1
Query:   82 LTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            +TVDEVRK QRA GPAT++AIGTATP NCV Q+ YPDYYFRIT S+H+TDLKEKFKRMCDKSMI+KRYM
Sbjct:    6 VTVDEVRKGQRATGPATVLAIGTATPANCVYQADYPDYYFRITKSDHLTDLKEKFKRMCDKSMIRKRYM 74          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHS9_MEDSA (Chalcone synthase 9 OS=Medicago sativa GN=CHS9 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 5.255e-28
Identity = 55/70 (78.57%), Postives = 65/70 (92.86%), Query Frame = 1
Query:   79 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M++V E+R+AQRAEGPATIMAIGTA P NCV+QSTYPD+YF+ITNSEH  +LKEKF+RMCDKSMIK+RYM
Sbjct:    1 MVSVSEIRQAQRAEGPATIMAIGTANPANCVEQSTYPDFYFKITNSEHKVELKEKFQRMCDKSMIKRRYM 70          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHS8_MEDSA (Chalcone synthase 8 OS=Medicago sativa GN=CHS8 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 5.255e-28
Identity = 55/70 (78.57%), Postives = 65/70 (92.86%), Query Frame = 1
Query:   79 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M++V E+R AQRAEGPATI+AIGTA P NCV+QSTYPD+YF+ITNSEH T+LKEKF+RMCDKSMIK+RYM
Sbjct:    1 MVSVSEIRTAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYM 70          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHS6_SORBI (Chalcone synthase 6 OS=Sorghum bicolor GN=CHS6 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 5.255e-28
Identity = 56/69 (81.16%), Postives = 63/69 (91.30%), Query Frame = 1
Query:   82 LTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            +TV+EVRKAQRA GPAT++AIGTATP NCV Q+ YPDYYFRIT SEHMT+LKEKFKRMCDKS I+KRYM
Sbjct:    6 VTVEEVRKAQRATGPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYM 74          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHS5_SORBI (Chalcone synthase 5 OS=Sorghum bicolor GN=CHS5 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 5.255e-28
Identity = 56/69 (81.16%), Postives = 63/69 (91.30%), Query Frame = 1
Query:   82 LTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            +TV+EVRKAQRA GPAT++AIGTATP NCV Q+ YPDYYFRIT SEHMT+LKEKFKRMCDKS I+KRYM
Sbjct:    6 VTVEEVRKAQRATGPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYM 74          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHS4_SORBI (Chalcone synthase 4 OS=Sorghum bicolor GN=CHS4 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 5.255e-28
Identity = 56/69 (81.16%), Postives = 63/69 (91.30%), Query Frame = 1
Query:   82 LTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            +TV+EVRKAQRA GPAT++AIGTATP NCV Q+ YPDYYFRIT SEHMT+LKEKFKRMCDKS I+KRYM
Sbjct:    6 VTVEEVRKAQRATGPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYM 74          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHS3_RUTGR (Chalcone synthase 3 OS=Ruta graveolens GN=CHS3 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 5.255e-28
Identity = 56/69 (81.16%), Postives = 64/69 (92.75%), Query Frame = 1
Query:   82 LTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            +TV+E+RKAQRA+GPAT++AIGTATP N V Q+ YPDYYFRIT SEHMTDLKEKFKRMCDKSMI+KRYM
Sbjct:    4 VTVEEIRKAQRADGPATVLAIGTATPANYVTQADYPDYYFRITKSEHMTDLKEKFKRMCDKSMIRKRYM 72          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHS3_MEDSA (Chalcone synthase 4-1 OS=Medicago sativa GN=CHS4-1 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 5.255e-28
Identity = 55/70 (78.57%), Postives = 65/70 (92.86%), Query Frame = 1
Query:   79 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M++V E+R+AQRAEGPATIMAIGTA P NCV+QSTYPD+YF+ITNSEH  +LKEKF+RMCDKSMIK+RYM
Sbjct:    1 MVSVSEIRQAQRAEGPATIMAIGTANPSNCVEQSTYPDFYFKITNSEHKVELKEKFQRMCDKSMIKRRYM 70          
The following BLAST results are available for this feature:
BLAST of EG358256 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CHS5_PEA4.024e-2878.57Chalcone synthase 5 OS=Pisum sativum GN=CHS5 PE=3 ... [more]
CHS3_PEA4.024e-2878.57Chalcone synthase 3 OS=Pisum sativum GN=CHS3 PE=3 ... [more]
CHS1_MAIZE4.024e-2881.16Chalcone synthase WHP1 OS=Zea mays GN=WHP1 PE=3 SV... [more]
CHS9_MEDSA5.255e-2878.57Chalcone synthase 9 OS=Medicago sativa GN=CHS9 PE=... [more]
CHS8_MEDSA5.255e-2878.57Chalcone synthase 8 OS=Medicago sativa GN=CHS8 PE=... [more]
CHS6_SORBI5.255e-2881.16Chalcone synthase 6 OS=Sorghum bicolor GN=CHS6 PE=... [more]
CHS5_SORBI5.255e-2881.16Chalcone synthase 5 OS=Sorghum bicolor GN=CHS5 PE=... [more]
CHS4_SORBI5.255e-2881.16Chalcone synthase 4 OS=Sorghum bicolor GN=CHS4 PE=... [more]
CHS3_RUTGR5.255e-2881.16Chalcone synthase 3 OS=Ruta graveolens GN=CHS3 PE=... [more]
CHS3_MEDSA5.255e-2878.57Chalcone synthase 4-1 OS=Medicago sativa GN=CHS4-1... [more]

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Properties
Property NameValue
Genbank description1e8 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0001e8, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358256 ID=EG358256; Name=EG358256; organism=Citrus sinensis; type=EST; length=288bp
ACGCGGGATACAAATTTATAAAGTATCAACAAGAGCTAGACAGGTCTCCG
GGAACCGTTGGATTGGAAGCAACAAACAATGTTGACCGTCGATGAAGTTC
GCAAGGCTCAACGTGCCGAAGGTCCGGCCACGATCATGGCCATTGGAACG
GCAACCCCTCCGAATTGTGTTGATCAAAGCACGTATCCGGATTATTATTT
TCGCATCACGAATAGTGAACACATGACTGATCTTAAAGAGAAATTCAAGC
GCATGTGTGACAAATCCATGATCAAGAAGCGATACATG
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