DY257357
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257357 vs. ExPASy Swiss-Prot
Match: Y4AC_RHISN (Putative phytoene synthase OS=Rhizobium sp. (strain NGR234) GN=NGR_a00440 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 3.025e-22 Identity = 69/182 (37.91%), Postives = 99/182 (54.40%), Query Frame = 1 Query: 1 FYLGTLLMTPERRRAIWAIYVWCRRTDELVDGPNASHITPTALDRWESRLEDLFRGRPFDMLDAGLSDTVTKFPVDIQPFRDMIEGMRMD-LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPDSQATTESVYNAALA--LGIANQLTNILRDVGEDAQRGRVYLPQDELAQAGLSDDD 537 FYLG + P +R AI+ IY +CR+ D++ D AL +W ++ L++ P L L+ +VT F + + F +++GM MD L+ R L LYC VA VG MSV V G++ + ALA LG A QLTNILRD+ EDA GR+Y+P++ L AG++ D Sbjct: 20 FYLGMRTLPPVQREAIFQIYSFCRQVDDIADSDEPREHRLAALQQWRDHIDALYQCVPPPRLKDYLA-SVTTFGLKREDFLAVVDGMEMDVLQDIRAPKMATLDLYCDRVASAVGRMSVRVFGLSEED--------GIALAHHLGRALQLTNILRDIDEDAGLGRLYIPRESLDHAGITSSD 192
BLAST of DY257357 vs. ExPASy Swiss-Prot
Match: CRTB_RHOCA (Phytoene synthase OS=Rhodobacter capsulatus GN=crtB PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.502e-21 Identity = 76/259 (29.34%), Postives = 122/259 (47.10%), Query Frame = 1 Query: 1 FYLGTLLMTPERRRAIWAIYVWCRRTDELVDGPNASHITPTALDRWESRLEDLFRGRPFDM-LDAGLSDTVTKFPVDIQPFRDMIEGMRMDLRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIA-PDSQATTESVYNAALALGIANQLTNILRDVGEDAQRGRVYLPQDELAQAGLSDDDIFAG-EVTNKWRNFMKNQIKRARMFFDMAENGVTELSEASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKKI 768 F+ + ++ R A+Y +CR D+ VD A A+ + RLED++ GRP + D + V +F + + ++EG D Y ++ Y VA VG M +M + PD+ A A LG+A Q++NI RDVGEDA+ GR++LP D + + G+ A + T R + + RA + A GV L R + A+ +Y I E+ Y+N T+RA+ +K +K+ Sbjct: 21 FHAASRVLPARVRDPALALYAFCRVADDEVDEVGAPRDKAAAVLKLGDRLEDIYAGRPRNAPSDRAFAAVVEEFEMPRELPEALLEGFAWDAEGRWYHTLSDVQAYSARVAAAVGAMMCVLMRVRNPDALAR-------ACDLGLAMQMSNIARDVGEDARAGRLFLPTDWMVEEGIDPQAFLADPQPTKGIRRVTERLLNRADRLYWRAATGVRLLPFDCRPGIMAAGKIYAAIGAEVAKAKYDNITRRAHTTKGRKL 272
BLAST of DY257357 vs. ExPASy Swiss-Prot
Match: CRTM_STAAN (Dehydrosqualene synthase OS=Staphylococcus aureus (strain N315) GN=crtM PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 4.521e-18 Identity = 68/252 (26.98%), Postives = 115/252 (45.63%), Query Frame = 1 Query: 19 LMTPERRRAIWAIYVWCRRTDELVDGPNASHITPTALDRWESRLEDLFRGRPFDM---LDAGLSDTVTKFPVDIQPFRDMIEGMRMDLRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPDSQATTESVYNAALALGIANQLTNILRDVGEDAQRGRVYLPQDELAQAGLSDDDIFAGEVTNKWRNFMKNQIKRARMFFDMAENGVTELSEASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKK 765 L+ ++R+A+WAIY CR+ D+ +D + +S + + F + L + Q F ++I+ + D + ++ EL+ YCY VAGTVG + P++ S T Y+ A LG + QL NILRDVGED RVY + L Q + +++ V N + + + A F + + S ++ + + +Y +ILDE+ +Y +R +V K KK Sbjct: 28 LLPEDQRKAVWAIYAVCRKIDDSIDVYGDIQFLNQIKEDIQSIEKYPYEHHHFQSDRRIMMALQHVAQHKNIAFQSFYNLIDTVYKDQHFTMFETDAELFGYCYGVAGTVGEVLTPIL-----SDHETHQTYDVARRLGESLQLINILRDVGEDFDNERVYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFQDVMDQIKVFSIEAQPIIELAARIYIEILDEVRQANY-TLHERVFVDKRKK 273
BLAST of DY257357 vs. ExPASy Swiss-Prot
Match: CRTM_STAAM (Dehydrosqualene synthase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=crtM PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 4.521e-18 Identity = 68/252 (26.98%), Postives = 115/252 (45.63%), Query Frame = 1 Query: 19 LMTPERRRAIWAIYVWCRRTDELVDGPNASHITPTALDRWESRLEDLFRGRPFDM---LDAGLSDTVTKFPVDIQPFRDMIEGMRMDLRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPDSQATTESVYNAALALGIANQLTNILRDVGEDAQRGRVYLPQDELAQAGLSDDDIFAGEVTNKWRNFMKNQIKRARMFFDMAENGVTELSEASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKK 765 L+ ++R+A+WAIY CR+ D+ +D + +S + + F + L + Q F ++I+ + D + ++ EL+ YCY VAGTVG + P++ S T Y+ A LG + QL NILRDVGED RVY + L Q + +++ V N + + + A F + + S ++ + + +Y +ILDE+ +Y +R +V K KK Sbjct: 28 LLPEDQRKAVWAIYAVCRKIDDSIDVYGDIQFLNQIKEDIQSIEKYPYEHHHFQSDRRIMMALQHVAQHKNIAFQSFYNLIDTVYKDQHFTMFETDAELFGYCYGVAGTVGEVLTPIL-----SDHETHQTYDVARRLGESLQLINILRDVGEDFDNERVYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFQDVMDQIKVFSIEAQPIIELAARIYIEILDEVRQANY-TLHERVFVDKRKK 273
BLAST of DY257357 vs. ExPASy Swiss-Prot
Match: CRTM_STAAW (Dehydrosqualene synthase OS=Staphylococcus aureus (strain MW2) GN=crtM PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 5.905e-18 Identity = 67/252 (26.59%), Postives = 115/252 (45.63%), Query Frame = 1 Query: 19 LMTPERRRAIWAIYVWCRRTDELVDGPNASHITPTALDRWESRLEDLFRGRPFDM---LDAGLSDTVTKFPVDIQPFRDMIEGMRMDLRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPDSQATTESVYNAALALGIANQLTNILRDVGEDAQRGRVYLPQDELAQAGLSDDDIFAGEVTNKWRNFMKNQIKRARMFFDMAENGVTELSEASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKK 765 L+ ++R+A+WAIY CR+ D+ +D + +S + + F + L + Q F ++I+ + D + ++ EL+ YCY VAGTVG + P++ S T Y+ A LG + QL NILRDVGED R+Y + L Q + +++ V N + + + A F + + S ++ + + +Y +ILDE+ +Y +R +V K KK Sbjct: 28 LLPEDQRKAVWAIYAVCRKIDDSIDVYGDIQFLNQIKEDIQSIEKYPYEHHHFQSDRRIMMALQHVAQHKNIAFQSFYNLIDTVYKDQHFTMFETDAELFGYCYGVAGTVGEVLTPIL-----SDHETHQTYDVARRLGESLQLINILRDVGEDFDNERIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFQDVMDQIKVFSIEAQPIIELAARIYIEILDEVRQANY-TLHERVFVDKRKK 273
BLAST of DY257357 vs. ExPASy Swiss-Prot
Match: CRTM_STAAS (Dehydrosqualene synthase OS=Staphylococcus aureus (strain MSSA476) GN=crtM PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 5.905e-18 Identity = 67/252 (26.59%), Postives = 115/252 (45.63%), Query Frame = 1 Query: 19 LMTPERRRAIWAIYVWCRRTDELVDGPNASHITPTALDRWESRLEDLFRGRPFDM---LDAGLSDTVTKFPVDIQPFRDMIEGMRMDLRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPDSQATTESVYNAALALGIANQLTNILRDVGEDAQRGRVYLPQDELAQAGLSDDDIFAGEVTNKWRNFMKNQIKRARMFFDMAENGVTELSEASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKK 765 L+ ++R+A+WAIY CR+ D+ +D + +S + + F + L + Q F ++I+ + D + ++ EL+ YCY VAGTVG + P++ S T Y+ A LG + QL NILRDVGED R+Y + L Q + +++ V N + + + A F + + S ++ + + +Y +ILDE+ +Y +R +V K KK Sbjct: 28 LLPEDQRKAVWAIYAVCRKIDDSIDVYGDIQFLNQIKEDIQSIEKYPYEHHHFQSDRRIMMALQHVAQHKNIAFQSFYNLIDTVYKDQHFTMFETDAELFGYCYGVAGTVGEVLTPIL-----SDHETHQTYDVARRLGESLQLINILRDVGEDFDNERIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFQDVMDQIKVFSIEAQPIIELAARIYIEILDEVRQANY-TLHERVFVDKRKK 273
BLAST of DY257357 vs. ExPASy Swiss-Prot
Match: CRTM_STAAE (Dehydrosqualene synthase OS=Staphylococcus aureus (strain Newman) GN=crtM PE=3 SV=3) HSP 1 Score: 92.0485 bits (227), Expect = 5.905e-18 Identity = 67/252 (26.59%), Postives = 115/252 (45.63%), Query Frame = 1 Query: 19 LMTPERRRAIWAIYVWCRRTDELVDGPNASHITPTALDRWESRLEDLFRGRPFDM---LDAGLSDTVTKFPVDIQPFRDMIEGMRMDLRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPDSQATTESVYNAALALGIANQLTNILRDVGEDAQRGRVYLPQDELAQAGLSDDDIFAGEVTNKWRNFMKNQIKRARMFFDMAENGVTELSEASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKK 765 L+ ++R+A+WAIY CR+ D+ +D + +S + + F + L + Q F ++I+ + D + ++ EL+ YCY VAGTVG + P++ S T Y+ A LG + QL NILRDVGED R+Y + L Q + +++ V N + + + A F + + S ++ + + +Y +ILDE+ +Y +R +V K KK Sbjct: 28 LLPEDQRKAVWAIYAVCRKIDDSIDVYGDIQFLNQIKEDIQSIEKYPYEHHHFQSDRRIMMALQHVAQHKNIAFQSFYNLIDTVYKDQHFTMFETDAELFGYCYGVAGTVGEVLTPIL-----SDHETHQTYDVARRLGESLQLINILRDVGEDFDNERIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFQDVMDQIKVFSIEAQPIIELAARIYIEILDEVRQANY-TLHERVFVDKRKK 273
BLAST of DY257357 vs. ExPASy Swiss-Prot
Match: CRTM_STAAC (Dehydrosqualene synthase OS=Staphylococcus aureus (strain COL) GN=crtM PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 5.905e-18 Identity = 67/252 (26.59%), Postives = 115/252 (45.63%), Query Frame = 1 Query: 19 LMTPERRRAIWAIYVWCRRTDELVDGPNASHITPTALDRWESRLEDLFRGRPFDM---LDAGLSDTVTKFPVDIQPFRDMIEGMRMDLRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPDSQATTESVYNAALALGIANQLTNILRDVGEDAQRGRVYLPQDELAQAGLSDDDIFAGEVTNKWRNFMKNQIKRARMFFDMAENGVTELSEASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKK 765 L+ ++R+A+WAIY CR+ D+ +D + +S + + F + L + Q F ++I+ + D + ++ EL+ YCY VAGTVG + P++ S T Y+ A LG + QL NILRDVGED R+Y + L Q + +++ V N + + + A F + + S ++ + + +Y +ILDE+ +Y +R +V K KK Sbjct: 28 LLPEDQRKAVWAIYAVCRKIDDSIDVYGDIQFLNQIKEDIQSIEKYPYEHHHFQSDRRIMMALQHVAQHKNIAFQSFYNLIDTVYKDQHFTMFETDAELFGYCYGVAGTVGEVLTPIL-----SDHETHQTYDVARRLGESLQLINILRDVGEDFDNERIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFQDVMDQIKVFSIEAQPIIELAARIYIEILDEVRQANY-TLHERVFVDKRKK 273
BLAST of DY257357 vs. ExPASy Swiss-Prot
Match: CRTM_STAA8 (Dehydrosqualene synthase OS=Staphylococcus aureus (strain NCTC 8325) GN=crtM PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 5.905e-18 Identity = 67/252 (26.59%), Postives = 115/252 (45.63%), Query Frame = 1 Query: 19 LMTPERRRAIWAIYVWCRRTDELVDGPNASHITPTALDRWESRLEDLFRGRPFDM---LDAGLSDTVTKFPVDIQPFRDMIEGMRMDLRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPDSQATTESVYNAALALGIANQLTNILRDVGEDAQRGRVYLPQDELAQAGLSDDDIFAGEVTNKWRNFMKNQIKRARMFFDMAENGVTELSEASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKK 765 L+ ++R+A+WAIY CR+ D+ +D + +S + + F + L + Q F ++I+ + D + ++ EL+ YCY VAGTVG + P++ S T Y+ A LG + QL NILRDVGED R+Y + L Q + +++ V N + + + A F + + S ++ + + +Y +ILDE+ +Y +R +V K KK Sbjct: 28 LLPEDQRKAVWAIYAVCRKIDDSIDVYGDIQFLNQIKEDIQSIEKYPYEHHHFQSDRRIMMALQHVAQHKNIAFQSFYNLIDTVYKDQHFTMFETDAELFGYCYGVAGTVGEVLTPIL-----SDHETHQTYDVARRLGESLQLINILRDVGEDFDNERIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFQDVMDQIKVFSIEAQPIIELAARIYIEILDEVRQANY-TLHERVFVDKRKK 273
BLAST of DY257357 vs. ExPASy Swiss-Prot
Match: CRTM_STAA3 (Dehydrosqualene synthase OS=Staphylococcus aureus (strain USA300) GN=crtM PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 5.905e-18 Identity = 67/252 (26.59%), Postives = 115/252 (45.63%), Query Frame = 1 Query: 19 LMTPERRRAIWAIYVWCRRTDELVDGPNASHITPTALDRWESRLEDLFRGRPFDM---LDAGLSDTVTKFPVDIQPFRDMIEGMRMDLRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPDSQATTESVYNAALALGIANQLTNILRDVGEDAQRGRVYLPQDELAQAGLSDDDIFAGEVTNKWRNFMKNQIKRARMFFDMAENGVTELSEASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKAKK 765 L+ ++R+A+WAIY CR+ D+ +D + +S + + F + L + Q F ++I+ + D + ++ EL+ YCY VAGTVG + P++ S T Y+ A LG + QL NILRDVGED R+Y + L Q + +++ V N + + + A F + + S ++ + + +Y +ILDE+ +Y +R +V K KK Sbjct: 28 LLPEDQRKAVWAIYAVCRKIDDSIDVYGDIQFLNQIKEDIQSIEKYPYEHHHFQSDRRIMMALQHVAQHKNIAFQSFYNLIDTVYKDQHFTMFETDAELFGYCYGVAGTVGEVLTPIL-----SDHETHQTYDVARRLGESLQLINILRDVGEDFDNERIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFQDVMDQIKVFSIEAQPIIELAARIYIEILDEVRQANY-TLHERVFVDKRKK 273 The following BLAST results are available for this feature:
BLAST of DY257357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >DY257357 ID=DY257357; Name=DY257357; organism=Citrus sinensis; type=EST; length=1034bpback to top |