EG358253

Overview
NameEG358253
Unique NameEG358253
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length292
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS2_HORVU (Chalcone synthase 2 OS=Hordeum vulgare GN=CHS2 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 6.625e-23
Identity = 50/59 (84.75%), Postives = 55/59 (93.22%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LG+ AA KAIKEWGQP SKITHLVFCTTSGVDMPGADY+LTKLLGL P+VKRLMM
Sbjct:  103 EVPKLGQGAAEKAIKEWGQPLSKITHLVFCTTSGVDMPGADYQLTKLLGLSPTVKRLMM 161
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: THS4_VITVI (Stilbene synthase 4 OS=Vitis vinifera GN=GSVIVT00005194001 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.130e-22
Identity = 47/59 (79.66%), Postives = 55/59 (93.22%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAA KA+KEWGQPKSKITHLVFCTTSGV+MPGADY+L  LLGL PSV+R+M+
Sbjct:  101 EVPKLGKEAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLEPSVRRVML 159
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: THS2_VITVI (Stilbene synthase 2 OS=Vitis vinifera GN=GSVIVT00004047001 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 1.130e-22
Identity = 47/59 (79.66%), Postives = 55/59 (93.22%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAA KA+KEWGQPKSKITHLVFCTTSGV+MPGADY+L  LLGL PSV+R+M+
Sbjct:  101 EVPKLGKEAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLEPSVRRVML 159
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHSB_IPOTR (Chalcone synthase B (Fragment) OS=Ipomoea triloba GN=CHSB PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.130e-22
Identity = 50/59 (84.75%), Postives = 55/59 (93.22%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAA KAIKEWG+P S+ITHLVFCTTSGVDMPGAD+RLTKLLGL  SVKRLMM
Sbjct:  109 EVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFRLTKLLGLNSSVKRLMM 167
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHSB_IPOPU (Chalcone synthase B OS=Ipomoea purpurea GN=CHSB PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.288e-22
Identity = 49/59 (83.05%), Postives = 55/59 (93.22%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAA KAIKEWG+P S+ITHLVFCTTSGVDMPGAD++LTKLLGL  SVKRLMM
Sbjct:  107 EVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMM 165
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHSB_IPONI (Chalcone synthase B (Fragment) OS=Ipomoea nil GN=CHSB PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.288e-22
Identity = 49/59 (83.05%), Postives = 55/59 (93.22%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAA KAIKEWG+P S+ITHLVFCTTSGVDMPGAD++LTKLLGL  SVKRLMM
Sbjct:  107 EVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMM 165
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHSB_IPOCO (Chalcone synthase B (Fragment) OS=Ipomoea cordatotriloba GN=CHSB PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.288e-22
Identity = 49/59 (83.05%), Postives = 55/59 (93.22%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAA KAIKEWG+P S+ITHLVFCTTSGVDMPGAD++LTKLLGL  SVKRLMM
Sbjct:  107 EVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMM 165
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHSA_IPOTR (Chalcone synthase A (Fragment) OS=Ipomoea triloba GN=CHSA PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.288e-22
Identity = 49/59 (83.05%), Postives = 55/59 (93.22%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAA KAIKEWG+P S+ITHLVFCTTSGVDMPGAD++LTKLLGL  SVKRLMM
Sbjct:  105 EVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMM 163
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHSA_IPOTF (Chalcone synthase A (Fragment) OS=Ipomoea trifida GN=CHSA PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.288e-22
Identity = 49/59 (83.05%), Postives = 55/59 (93.22%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAA KAIKEWG+P S+ITHLVFCTTSGVDMPGAD++LTKLLGL  SVKRLMM
Sbjct:  105 EVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMM 163
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHSA_IPOCO (Chalcone synthase A (Fragment) OS=Ipomoea cordatotriloba GN=CHSA PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.288e-22
Identity = 49/59 (83.05%), Postives = 55/59 (93.22%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAA KAIKEWG+P S+ITHLVFCTTSGVDMPGAD++LTKLLGL  SVKRLMM
Sbjct:  105 EVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMM 163
The following BLAST results are available for this feature:
BLAST of EG358253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CHS2_HORVU6.625e-2384.75Chalcone synthase 2 OS=Hordeum vulgare GN=CHS2 PE=... [more]
THS4_VITVI1.130e-2279.66Stilbene synthase 4 OS=Vitis vinifera GN=GSVIVT000... [more]
THS2_VITVI1.130e-2279.66Stilbene synthase 2 OS=Vitis vinifera GN=GSVIVT000... [more]
CHSB_IPOTR1.130e-2284.75Chalcone synthase B (Fragment) OS=Ipomoea triloba ... [more]
CHSB_IPOPU3.288e-2283.05Chalcone synthase B OS=Ipomoea purpurea GN=CHSB PE... [more]
CHSB_IPONI3.288e-2283.05Chalcone synthase B (Fragment) OS=Ipomoea nil GN=C... [more]
CHSB_IPOCO3.288e-2283.05Chalcone synthase B (Fragment) OS=Ipomoea cordatot... [more]
CHSA_IPOTR3.288e-2283.05Chalcone synthase A (Fragment) OS=Ipomoea triloba ... [more]
CHSA_IPOTF3.288e-2283.05Chalcone synthase A (Fragment) OS=Ipomoea trifida ... [more]
CHSA_IPOCO3.288e-2283.05Chalcone synthase A (Fragment) OS=Ipomoea cordatot... [more]

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Properties
Property NameValue
Genbank description9b1 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0009b1, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358253 ID=EG358253; Name=EG358253; organism=Citrus sinensis; type=EST; length=292bp
ACATCATGAGACGTTTGACGGATGGGCGAAGGCCCAAGAGTTTTGTGAGC
CGGTAATCGGCCCCGGGCATGTCAACACCGCTAGTGGTGCAAAAGACCAA
GTGGGTGATTTTGGACTTGGGCTGGCCCCATTCTTTAATGGCCTTGGTGG
CTGCTTCTTTGCCGAGCCTCGGTACCTGCCCGGGCGGCCGCTCGATGCAC
GTGGTTATGTTGCAGCCCTGTCTCTTGGTGCTCAAGGCATCTGCTTAGGC
ACAAGGTTTGTGGCAAGTGAGGAAAGCTATGCGCATCCTGAG
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