CX047311
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047311 vs. ExPASy Swiss-Prot
Match: RL32_DROMD (60S ribosomal protein L32 OS=Drosophila madeirensis GN=RpL32 PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 8.537e-39 Identity = 77/114 (67.54%), Postives = 90/114 (78.95%), Query Frame = -3 Query: 188 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYFPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSPRKRKEIVERAAQLDIVVTNKLARLRSQEDE 529 R QSDR + WR+PKGID+RVRR+FKG LMPNIGYGS+K+TRH P GFKKF+VHN +ELE+L+M NR YC EIAH VS +KRKEIVERA QL I +TN RLRSQE+E Sbjct: 21 RHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRIYCGEIAHAVSSKKRKEIVERAKQLSIRLTNPNGRLRSQENE 134
BLAST of CX047311 vs. ExPASy Swiss-Prot
Match: RL32_DROGU (60S ribosomal protein L32 OS=Drosophila guanche GN=RpL32 PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 8.537e-39 Identity = 77/114 (67.54%), Postives = 90/114 (78.95%), Query Frame = -3 Query: 188 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYFPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSPRKRKEIVERAAQLDIVVTNKLARLRSQEDE 529 R QSDR + WR+PKGID+RVRR+FKG LMPNIGYGS+K+TRH P GFKKF+VHN +ELE+L+M NR YC EIAH VS +KRKEIVERA QL I +TN RLRSQE+E Sbjct: 21 RHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRIYCGEIAHAVSSKKRKEIVERAKQLSIRLTNPNGRLRSQENE 134
BLAST of CX047311 vs. ExPASy Swiss-Prot
Match: RL32_DROBF (60S ribosomal protein L32 OS=Drosophila bifasciata GN=RpL32 PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 8.537e-39 Identity = 77/114 (67.54%), Postives = 90/114 (78.95%), Query Frame = -3 Query: 188 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYFPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSPRKRKEIVERAAQLDIVVTNKLARLRSQEDE 529 R QSDR + WR+PKGID+RVRR+FKG LMPNIGYGS+K+TRH P GFKKF+VHN +ELE+L+M NR YC EIAH VS +KRKEIVERA QL I +TN RLRSQE+E Sbjct: 21 RHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRIYCGEIAHAVSSKKRKEIVERAKQLSIRLTNPNGRLRSQENE 134
BLAST of CX047311 vs. ExPASy Swiss-Prot
Match: RL32_APIME (60S ribosomal protein L32 OS=Apis mellifera GN=RpL32 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.456e-38 Identity = 79/114 (69.30%), Postives = 90/114 (78.95%), Query Frame = -3 Query: 188 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYFPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSPRKRKEIVERAAQLDIVVTNKLARLRSQEDE 529 R QSDR +K NWR+PKGID+RVRR+FKG LMPNIGYGS+KKTRH P GF+K +VHN KELE+LMM NR +CAEIAH S +KRK IVERA QL I VT ARLRSQE+E Sbjct: 21 RHQSDRYSKLKRNWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPTGFRKVLVHNVKELEVLMMQNRKFCAEIAHGGSSKKRKSIVERAQQLSIRVTYASARLRSQENE 134
BLAST of CX047311 vs. ExPASy Swiss-Prot
Match: RL32P_MOUSE (Putative 60S ribosomal protein L32' OS=Mus musculus GN=Rpl32-ps PE=5 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 7.479e-35 Identity = 72/114 (63.16%), Postives = 91/114 (79.82%), Query Frame = -3 Query: 188 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYFPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSPRKRKEIVERAAQLDIVVTNKLARLRSQEDE 529 R QSDR + +K NWR+P+GID+RVRR+FKG LMPNIGY S+KKT+H +GF+KF+VHN KE E+L+M N++Y AEIAH+VS + RK IVERAAQL I VTN RL S+E+E Sbjct: 22 RHQSDRYVKIKWNWRKPRGIDNRVRRRFKGQILMPNIGYRSNKKTKHTLSSGFRKFLVHNIKEPEVLLMCNKSYRAEIAHNVSSKNRKAIVERAAQLAIRVTNPNTRLHSEENE 135
BLAST of CX047311 vs. ExPASy Swiss-Prot
Match: RL32_NEUCR (60S ribosomal protein L32 OS=Neurospora crassa GN=rpl-32 PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 9.143e-33 Identity = 66/111 (59.46%), Postives = 86/111 (77.48%), Query Frame = -3 Query: 197 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYFPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSPRKRKEIVERAAQLDIVVTNKLARLRSQ 529 R QSDR + V WR+PKGID+RVRR+F+G MP+IGYGS+KKTRH P+G K F+V N K++ELL+MHN+TY AEIAH+VS RKR EI+ RA QL + VTN A++ ++ Sbjct: 20 RHQSDRFMRVDSAWRKPKGIDNRVRRRFRGTLAMPSIGYGSNKKTRHMMPSGHKAFLVSNVKDVELLLMHNKTYAAEIAHNVSSRKRIEIIARAKQLSVKVTNAKAKVTTE 130
BLAST of CX047311 vs. ExPASy Swiss-Prot
Match: RL32A_SCHPO (60S ribosomal protein L32-A OS=Schizosaccharomyces pombe GN=rpl32a PE=1 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 2.252e-31 Identity = 67/112 (59.82%), Postives = 85/112 (75.89%), Query Frame = -3 Query: 194 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYFPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSPRKRKEIVERAAQLDIVVTNKLARLRSQE 529 R QSDR V E+WR+P+GIDS VRR+F+G MP IGYG++KKTR+ PNG K F+V N ++ELL+MHN+TY AEIA +VS RKR EIVE+A L + VTN A++RSQE Sbjct: 16 RHQSDRFKRVGESWRKPRGIDSCVRRRFRGTISMPKIGYGNNKKTRYCMPNGLKAFLVRNVSDVELLLMHNKTYAAEIAGNVSARKRVEIVEKARALGVKVTNAGAKVRSQE 127
BLAST of CX047311 vs. ExPASy Swiss-Prot
Match: RL32B_SCHPO (60S ribosomal protein L32-B OS=Schizosaccharomyces pombe GN=rpl32b PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.118e-30 Identity = 66/112 (58.93%), Postives = 84/112 (75.00%), Query Frame = -3 Query: 194 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYFPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSPRKRKEIVERAAQLDIVVTNKLARLRSQE 529 R QSD V E+WR+P+GIDS VRR+F+G MP IGYG++KKTR+ PNG K F+V N ++ELL+MHN+TY AEIA +VS RKR EIVE+A L + VTN A++RSQE Sbjct: 16 RHQSDLFKRVGESWRKPRGIDSCVRRRFRGTISMPKIGYGNNKKTRYCMPNGLKAFLVRNVSDVELLLMHNKTYAAEIASNVSARKRVEIVEKARALGVKVTNAGAKVRSQE 127
BLAST of CX047311 vs. ExPASy Swiss-Prot
Match: RL32_DICDI (60S ribosomal protein L32 OS=Dictyostelium discoideum GN=rpl32 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.784e-28 Identity = 64/114 (56.14%), Postives = 82/114 (71.93%), Query Frame = -3 Query: 188 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYFPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSPRKRKEIVERAAQLDIVVTNKLARLRSQEDE 529 R QSD V +WR+P+GID+RVRR+F G MP+IG+GS K T+ P+GFK+FV+ N +ELE+L+M NR Y A I H VS + RK IVERAA+L+I VT ARLRS+E E Sbjct: 20 RFQSDLFKRVGASWRKPRGIDNRVRRRFSGSRAMPSIGFGSAKATKDVCPDGFKRFVIRNVQELEVLLMQNRRYAAVIFHGVSAKSRKAIVERAAELNIKVTTPNARLRSEERE 133
BLAST of CX047311 vs. ExPASy Swiss-Prot
Match: RL32_CANAL (60S ribosomal protein L32 OS=Candida albicans GN=RPL32 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.846e-25 Identity = 57/108 (52.78%), Postives = 76/108 (70.37%), Query Frame = -3 Query: 206 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYFPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSPRKRKEIVERAAQLDIVVTNKLARL 529 R SDR V ENWR+ KGIDS VRR+F+G PNIGYGS+KKT+ P G+K ++V N K+L++L++H ++Y AEIA VS RKR EIV +A +L + VTN +L Sbjct: 20 RHHSDRYHRVAENWRKQKGIDSCVRRRFRGTIPQPNIGYGSNKKTKFLNPAGYKVYLVKNVKDLDVLLLHTKSYAAEIASSVSSRKRVEIVAKAKKLGVKVTNPKGKL 127 The following BLAST results are available for this feature:
BLAST of CX047311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 52
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Sequences
The
following sequences are available for this feature:
EST sequence >CX047311 ID=CX047311; Name=CX047311; organism=Citrus sinensis; type=EST; length=663bpback to top |