DY257342

Overview
NameDY257342
Unique NameDY257342
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1284
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY257342 vs. ExPASy Swiss-Prot
Match: CP1B1_RAT (Cytochrome P450 1B1 OS=Rattus norvegicus GN=Cyp1b1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 9.446e-11
Identity = 50/228 (21.93%), Postives = 103/228 (45.18%), Query Frame = 1 
Query:   49 PPGPWKLPVIGNLHQLAGSLPHHGLRDLSKKYGPLMLLQLGQVPTVIVSSPEVANEVMKAHDVIFASRPHFPAAQIMSYNYRDIILSPYSDSWKQLRKICVSEILS-------AKRVQSFQSVREAEVSYLINWISSKAGSVVNLTENVYSLMYGITSRAAFGYR-SRDQEAFVSVI---EEATKVISGFNIADIFPSIGLVQWLTGNKSQVEKLHQEADRIVENIIN 699
            PPGP+  P+IGN   + G   H     L+++YG +  ++LG  P V+++     ++ +     +FA RP F + +++S   R +    YS+ WK+ R+     + +       ++ +    ++ EA     +       G+ ++ T+ +   +  + S   FG R + D   F+ ++   EE  + +   ++ D+ P      WL    + V  + +E ++I  N  N
Sbjct:   51 PPGPFPWPLIGNAASV-GRASHLYFARLARRYGDVFQIRLGSCPVVVLNGESAIHQALVQQGGVFADRPPFASFRVVS-GGRSLAFGHYSERWKERRRAAYGTMRAFSTRHPRSRGLLEGHALGEARELVAVLVRRCAGGACLDPTQPIIVAVANVMSAVCFGCRYNHDDAEFLELLSHNEEFGRTVGAGSLVDVMP------WLQLFPNPVRTIFREFEQINRNFSN 270
The following BLAST results are available for this feature:
BLAST of DY257342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 191
Match NameE-valueIdentityDescription
CP1B1_RAT9.446e-1121.93Cytochrome P450 1B1 OS=Rattus norvegicus GN=Cyp1b1... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK2AD01FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257342 ID=DY257342; Name=DY257342; organism=Citrus sinensis; type=EST; length=1284bp
CTGAAACTAGAGAAGAAATCAGAAACCAATAACAGAATCTCAAATCTACC
ACCAGGACCATGGAAATTACCTGTAATAGGAAATTTGCACCAGCTGGCTG
GCTCCCTCCCCCATCATGGACTACGCGACCTGTCCAAGAAATACGGACCA
CTTATGCTTCTACAACTCGGGCAAGTTCCAACCGTTATTGTATCTTCCCC
TGAAGTTGCCAATGAAGTTATGAAAGCCCATGATGTTATCTTTGCATCCA
GGCCTCATTTTCCTGCAGCACAAATCATGTCTTATAATTATCGTGATATA
ATTTTATCACCATATAGTGACTCTTGGAAACAACTGCGAAAAATCTGTGT
GTCTGAGATTTTGAGCGCCAAAAGAGTCCAATCTTTCCAATCAGTAAGAG
AAGCAGAGGTATCTTATCTCATTAATTGGATTTCTTCAAAAGCTGGATCC
GTTGTTAACTTAACTGAGAACGTTTACTCATTAATGTACGGTATCACTTC
AAGGGCGGCCTTTGGATACAGATCCAGAGACCAAGAAGCATTTGTCTCAG
TTATAGAGGAAGCAACAAAAGTGATCTCAGGTTTTAATATTGCAGATATT
TTTCCTTCCATTGGATTGGTTCAGTGGCTTACTGGAAACAAGTCTCAGGT
GGAGAAGCTGCATCAAGAAGCTGACAGAATAGTTGAAAACATTATCAATG
AACATAAGAAGCGGAAGGAAACATTGAAGAATTGCAAGACTGGTGATGAT
GAAGATCTGGTTTGATGTTCTGTTGAAAATTCCAGGGCTCGGAAATTATG
GTTCTTCCTTGACTACAGACAACATCAAAGCAGTAATCTCTGACATTTTT
TGGTGGCTGGAGTGAAACATCTGCCACCACGGTGGAATGGGGAAGGTGTG
AAATGAAAAAAAATCCAGAATTAATAAAAAAGCCGAGGCTGAGGCGAAGG
GAGGGTTTAATAAAAAGGGGAAAAGTCAAACAAACCGGGAATTAAGAAAT
GATGGACATGAACCTAGGTTGTAAGGAAAAATTTGAAACTACATCCCCCT
GGGTCTTTTGTATTGCCCAAAAAAAGGGGGAAAGGGGATTAAAAAATTAA
GGAATTTTAAATAACCGGTTGAAACCTAAAGTCCTTTTTAAAGGCCGTGG
GCCAATTTGAGAAAAAAATTCCCAAGTATCCGGGAACCAAAAAACCTGAA
AAAATTTTTTAATTCCCCAAAAAAAGAGGTTTTCCCCCCTCTATTTAATT
TCTCCGTTTTTTAAAACAACCACAAGGGAGGGGA
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