CX300832
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300832 vs. ExPASy Swiss-Prot
Match: SDL5A_SOYBN (Dynamin-related protein 5A OS=Glycine max PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.013e-24 Identity = 61/123 (49.59%), Postives = 82/123 (66.67%), Query Frame = 3 Query: 177 HKKDEGE-EYAVFGHLPDKKIYDFELVKEEIIKQTTEVAGSDRGISQVPIVLEIFSPKVVPLSLVDLPGVTKVPVGNQPPDIERLTEELTLKYIREEDTIILAVTAANVDIANSDAIKLAKKV 542 HK +EG EYA F HLP K+ DF V++EI +T G + IS VPI L I+SP VV L+LVDLPG+TKV V QP I + E++ YI + + IILA++ AN D+A SDAIK++++V Sbjct: 77 HKIEEGSREYAEFLHLPRKRFTDFVAVRKEIQDETDRETGRTKQISTVPIHLSIYSPNVVNLTLVDLPGLTKVAVEGQPDSIVKDIEDMVRSYIEKPNCIILAISPANQDLATSDAIKISREV 199
BLAST of CX300832 vs. ExPASy Swiss-Prot
Match: DRP1D_ARATH (Dynamin-related protein 1D OS=Arabidopsis thaliana GN=DRP1D PE=2 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 3.935e-24 Identity = 59/123 (47.97%), Postives = 82/123 (66.67%), Query Frame = 3 Query: 177 HKKDEG-EEYAVFGHLPDKKIYDFELVKEEIIKQTTEVAGSDRGISQVPIVLEIFSPKVVPLSLVDLPGVTKVPVGNQPPDIERLTEELTLKYIREEDTIILAVTAANVDIANSDAIKLAKKV 542 HK + G E+ A F HL +KK +F LV++EI +T + G ++ IS +PI L IFSP VV L+L+DLPG+TKV V QP I E + Y+ + + +ILA++ AN DIA SDA+KLAK+V Sbjct: 78 HKTENGTEDNAEFLHLTNKKFTNFSLVRKEIEDETDRITGKNKQISSIPIHLSIFSPNVVNLTLIDLPGLTKVAVEGQPETIVEDIESMVRSYVEKPNCLILAISPANQDIATSDAMKLAKEV 200
BLAST of CX300832 vs. ExPASy Swiss-Prot
Match: DRP1A_ARATH (Dynamin-related protein 1A OS=Arabidopsis thaliana GN=DRP1A PE=1 SV=3) HSP 1 Score: 107.842 bits (268), Expect = 3.331e-23 Identity = 59/122 (48.36%), Postives = 79/122 (64.75%), Query Frame = 3 Query: 180 KKDEG-EEYAVFGHLPDKKIYDFELVKEEIIKQTTEVAGSDRGISQVPIVLEIFSPKVVPLSLVDLPGVTKVPVGNQPPDIERLTEELTLKYIREEDTIILAVTAANVDIANSDAIKLAKKV 542 K D+G EYA F HLP KK DF V++EI +T G + IS VPI L I+SP VV L+L+DLPG+TKV V Q I + E + YI + + IILA++ AN D+A SDAIK++++V Sbjct: 78 KIDDGTREYAEFLHLPRKKFTDFAAVRKEIQDETDRETGRSKAISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVDGQSDSIVKDIENMVRSYIEKPNCIILAISPANQDLATSDAIKISREV 199
BLAST of CX300832 vs. ExPASy Swiss-Prot
Match: MX1_BOVIN (Interferon-induced GTP-binding protein Mx1 OS=Bos taurus GN=MX1 PE=2 SV=4) HSP 1 Score: 94.7449 bits (234), Expect = 2.918e-19 Identity = 50/104 (48.08%), Postives = 70/104 (67.31%), Query Frame = 3 Query: 231 KIYDFELVKEEIIKQTTEVAGSDRGISQVPIVLEIFSPKVVPLSLVDLPGVTKVPVGNQPPDIERLTEELTLKYIREEDTIILAVTAANVDIANSDAIKLAKKV 542 +I D V++EI + +AG GIS I LE+ SP V L+L+DLPG+T+V VGNQPPDIE + L KYI ++TI L V ANVDIA ++A+++A++V Sbjct: 121 EIPDASQVEKEISEAQIAIAGEGTGISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPPDIEYQIKSLIRKYILRQETINLVVVPANVDIATTEALRMAQEV 224
BLAST of CX300832 vs. ExPASy Swiss-Prot
Match: MX_CTEID (Interferon-induced GTP-binding protein Mx OS=Ctenopharyngodon idella GN=mx PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 3.811e-19 Identity = 60/173 (34.68%), Postives = 87/173 (50.29%), Query Frame = 3 Query: 24 GICTRRPLELRLHNISSSLSKKQSIENEENQGKDKNVESTESASATTEKKRHKKDEGEEYAVFGHLPDKKIYDFELVKEEIIKQTTEVAGSDRGISQVPIVLEIFSPKVVPLSLVDLPGVTKVPVGNQPPDIERLTEELTLKYIREEDTIILAVTAANVDIANSDAIKLAKKV 542 GI TR PL L+L IS KD N + ++ + KD E ++ ++K T +AG+ GIS I LEI S V L+L+DLPG+ +V GNQP DIE+ ++L KYI+ ++TI L V AN+DIA ++A+++A KV Sbjct: 73 GIVTRCPLVLKLKKIS----------------KDNNWHQWHGLMSYRDQTKKLKDPAE------------------IENAVLKAQTVLAGTGEGISHEMITLEIQSSDVPDLTLIDLPGIARVATGNQPKDIEKQIKDLIEKYIKRQETISLVVVPANIDIATTEALQMASKV 211
BLAST of CX300832 vs. ExPASy Swiss-Prot
Match: MX1_PHOVI (Interferon-induced GTP-binding protein Mx1 OS=Phoca vitulina GN=MX1 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 6.501e-19 Identity = 50/106 (47.17%), Postives = 71/106 (66.98%), Query Frame = 3 Query: 225 DKKIYDFELVKEEIIKQTTEVAGSDRGISQVPIVLEIFSPKVVPLSLVDLPGVTKVPVGNQPPDIERLTEELTLKYIREEDTIILAVTAANVDIANSDAIKLAKKV 542 + +I D V+ EI K +AG +GIS I LE+ SP V L+L+DLPG+T+V VGNQP DI R T++L KYI +++TI L V NVDIA ++A+ +A++V Sbjct: 128 EMEISDPSEVEVEISKAQNVIAGEGQGISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPADIGRQTKQLIRKYILKQETINLVVVPCNVDIATTEALSMAQEV 233
BLAST of CX300832 vs. ExPASy Swiss-Prot
Match: MX1_CANFA (Interferon-induced GTP-binding protein Mx1 OS=Canis familiaris GN=MX1 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 8.490e-19 Identity = 50/106 (47.17%), Postives = 71/106 (66.98%), Query Frame = 3 Query: 225 DKKIYDFELVKEEIIKQTTEVAGSDRGISQVPIVLEIFSPKVVPLSLVDLPGVTKVPVGNQPPDIERLTEELTLKYIREEDTIILAVTAANVDIANSDAIKLAKKV 542 + +I D V+ EI K +AG +GIS I LE+ SP V L+L+DLPG+T+V VGNQP DI R T++L KYI +++TI L V NVDIA ++A+ +A++V Sbjct: 126 EMEISDPSEVEVEINKAQDAIAGEGQGISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPADIGRQTKQLIRKYILKQETINLVVVPCNVDIATTEALSMAQEV 231
BLAST of CX300832 vs. ExPASy Swiss-Prot
Match: MX1_OTABY (Interferon-induced GTP-binding protein Mx1 OS=Otaria byronia GN=MX1 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.470e-18 Identity = 54/125 (43.20%), Postives = 76/125 (60.80%), Query Frame = 3 Query: 168 KKRHKKDEGEEYAVFGHLPDKKIYDFELVKEEIIKQTTEVAGSDRGISQVPIVLEIFSPKVVPLSLVDLPGVTKVPVGNQPPDIERLTEELTLKYIREEDTIILAVTAANVDIANSDAIKLAKKV 542 KK KDE + + +I D V+ EI K +AG +GIS I LE+ SP V L+L+DLPG+T+V VGNQP DI T++L KYI +++TI L V NVDIA ++A+ +A++V Sbjct: 110 KKLLNKDEWRGKVSYQDF-EMEISDPSEVEVEINKAQNAIAGEGQGISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPADIGHQTKKLIKKYILKQETINLVVVPCNVDIATTEALSMAQEV 233
BLAST of CX300832 vs. ExPASy Swiss-Prot
Match: MX1_EUMJU (Interferon-induced GTP-binding protein Mx1 OS=Eumetopias jubatus GN=MX1 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.470e-18 Identity = 54/125 (43.20%), Postives = 76/125 (60.80%), Query Frame = 3 Query: 168 KKRHKKDEGEEYAVFGHLPDKKIYDFELVKEEIIKQTTEVAGSDRGISQVPIVLEIFSPKVVPLSLVDLPGVTKVPVGNQPPDIERLTEELTLKYIREEDTIILAVTAANVDIANSDAIKLAKKV 542 KK KDE + + +I D V+ EI K +AG +GIS I LE+ SP V L+L+DLPG+T+V VGNQP DI T++L KYI +++TI L V NVDIA ++A+ +A++V Sbjct: 110 KKLLNKDEWRGKVSYQDF-EMEISDPSEVEVEINKAQNAIAGEGQGISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPADIGHQTKKLIKKYILKQETINLVVVPCNVDIATTEALSMAEEV 233
BLAST of CX300832 vs. ExPASy Swiss-Prot
Match: MX2_PIG (Interferon-induced GTP-binding protein Mx2 OS=Sus scrofa GN=MX2 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.214e-18 Identity = 49/104 (47.12%), Postives = 69/104 (66.35%), Query Frame = 3 Query: 231 KIYDFELVKEEIIKQTTEVAGSDRGISQVPIVLEIFSPKVVPLSLVDLPGVTKVPVGNQPPDIERLTEELTLKYIREEDTIILAVTAANVDIANSDAIKLAKKV 542 ++ D V+ EI K +AGS GIS I LE+ SP+V L+L+DLPG+T+V VGNQP DI + L KYI+E+ TI L V NVDIA ++A+++A++V Sbjct: 175 QLQDPSQVEREIRKAQDAIAGSGVGISHELISLEVTSPEVPDLTLIDLPGITRVAVGNQPQDIGLQIKALIRKYIQEQQTINLVVVPCNVDIATTEALRMAQEV 278 The following BLAST results are available for this feature:
BLAST of CX300832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300832 ID=CX300832; Name=CX300832; organism=Citrus sinensis; type=EST; length=542bpback to top |