GR312992

Overview
NameGR312992
Unique NameGR312992
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13533 contig Csv1_Contig13533:554..769. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GR312992 vs. ExPASy Swiss-Prot
Match: ACCO_PRUMU (1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 9.585e-35
Identity = 66/72 (91.67%), Postives = 71/72 (98.61%), Query Frame = 1
Query:    1 TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGK 216
            TKVSNYPPCP P+LIKGLRAHTDAGG+ILLFQDDKVSGLQLLKDGQWIDVPP+RHSIV+NLGDQ+EVITNGK
Sbjct:  157 TKVSNYPPCPNPELIKGLRAHTDAGGLILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVINLGDQLEVITNGK 228          
BLAST of GR312992 vs. ExPASy Swiss-Prot
Match: ACCO_PEA (1-aminocyclopropane-1-carboxylate oxidase OS=Pisum sativum GN=ACO PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 9.585e-35
Identity = 67/72 (93.06%), Postives = 71/72 (98.61%), Query Frame = 1
Query:    1 TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGK 216
            TKVSNYPPCPKP+LIKGLRAHTDAGGIILLFQDDKVSGLQLLKD QWIDVPP+RHSIV+NLGDQ+EVITNGK
Sbjct:  157 TKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGDQLEVITNGK 228          
BLAST of GR312992 vs. ExPASy Swiss-Prot
Match: ACCO1_MALDO (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 9.585e-35
Identity = 66/72 (91.67%), Postives = 71/72 (98.61%), Query Frame = 1
Query:    1 TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGK 216
            TKVSNYPPCPKPDLIKGLRAH+DAGGIILLFQDDKVSGLQLLKDG+W+DVPP+ HSIV+NLGDQIEVITNGK
Sbjct:  157 TKVSNYPPCPKPDLIKGLRAHSDAGGIILLFQDDKVSGLQLLKDGEWVDVPPMHHSIVINLGDQIEVITNGK 228          
BLAST of GR312992 vs. ExPASy Swiss-Prot
Match: ACCO1_ARATH (1-aminocyclopropane-1-carboxylate oxidase OS=Arabidopsis thaliana GN=ACO PE=2 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 1.635e-34
Identity = 65/72 (90.28%), Postives = 71/72 (98.61%), Query Frame = 1
Query:    1 TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGK 216
            TKVSNYPPCP PDL+KGLRAHTDAGGIILLFQDDKVSGLQLLKDG+W+DVPP++HSIVVNLGDQ+EVITNGK
Sbjct:  157 TKVSNYPPCPNPDLVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWVDVPPVKHSIVVNLGDQLEVITNGK 228          
BLAST of GR312992 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 4.757e-34
Identity = 67/72 (93.06%), Postives = 71/72 (98.61%), Query Frame = 1
Query:    1 TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGK 216
            +KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKV+GLQLLKDGQWIDVPP+R SIVVNLGDQ+EVITNGK
Sbjct:  157 SKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGQWIDVPPMRLSIVVNLGDQLEVITNGK 228          
BLAST of GR312992 vs. ExPASy Swiss-Prot
Match: ACCO_ACTDE (1-aminocyclopropane-1-carboxylate oxidase OS=Actinidia deliciosa GN=ACO PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.060e-33
Identity = 63/72 (87.50%), Postives = 72/72 (100.00%), Query Frame = 1
Query:    1 TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGK 216
            TKVSNYPPCP+P+LIKGLRAHTDAGGIILLFQD+KVSGLQLLKDG+WIDVPP++HSIV+N+GDQ+EVITNGK
Sbjct:  157 TKVSNYPPCPRPELIKGLRAHTDAGGIILLFQDNKVSGLQLLKDGEWIDVPPMKHSIVINIGDQLEVITNGK 228          
BLAST of GR312992 vs. ExPASy Swiss-Prot
Match: ACCO2_DORSP (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Doritaenopsis sp. GN=ACO2 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.060e-33
Identity = 66/72 (91.67%), Postives = 71/72 (98.61%), Query Frame = 1
Query:    1 TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGK 216
            TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKD +WI+VPPLR+SIVVN+GDQ+EVITNGK
Sbjct:  161 TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDREWIEVPPLRYSIVVNIGDQLEVITNGK 232          
BLAST of GR312992 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.384e-33
Identity = 65/72 (90.28%), Postives = 70/72 (97.22%), Query Frame = 1
Query:    1 TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGK 216
            TKV+NYPPCPK DLIKGLRAHTDAGGIILLFQDDKVSGLQLLKD QWIDVPP++HSIV+NLGDQ+EVITNGK
Sbjct:  157 TKVANYPPCPKADLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMKHSIVINLGDQLEVITNGK 228          
BLAST of GR312992 vs. ExPASy Swiss-Prot
Match: ACCO_DENCR (1-aminocyclopropane-1-carboxylate oxidase OS=Dendrobium crumenatum GN=ACO PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.808e-33
Identity = 65/72 (90.28%), Postives = 70/72 (97.22%), Query Frame = 1
Query:    1 TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGK 216
            TKVSNYPPCPKP+LIKGLRAHTDAGGIILLFQDD VSGLQLLKD +WIDVPP+RHSIVVN+GDQ+EVITNGK
Sbjct:  155 TKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDTVSGLQLLKDEEWIDVPPMRHSIVVNIGDQLEVITNGK 226          
BLAST of GR312992 vs. ExPASy Swiss-Prot
Match: ACCO3_CUCME (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Cucumis melo GN=ACO3 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 3.083e-33
Identity = 62/72 (86.11%), Postives = 70/72 (97.22%), Query Frame = 1
Query:    1 TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGK 216
            TKVSNYPPCPKP+LIKGLRAHTDAGG+ILLFQDDKVSGL +LKDG+W+DVPP+ HSIV+NLGDQ+EVITNGK
Sbjct:  158 TKVSNYPPCPKPELIKGLRAHTDAGGLILLFQDDKVSGLHVLKDGKWVDVPPMHHSIVINLGDQLEVITNGK 229          
The following BLAST results are available for this feature:
BLAST of GR312992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
ACCO_PRUMU9.585e-3591.671-aminocyclopropane-1-carboxylate oxidase OS=Prunu... [more]
ACCO_PEA9.585e-3593.061-aminocyclopropane-1-carboxylate oxidase OS=Pisum... [more]
ACCO1_MALDO9.585e-3591.671-aminocyclopropane-1-carboxylate oxidase 1 OS=Mal... [more]
ACCO1_ARATH1.635e-3490.281-aminocyclopropane-1-carboxylate oxidase OS=Arabi... [more]
ACCO_TOBAC4.757e-3493.061-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]
ACCO_ACTDE1.060e-3387.501-aminocyclopropane-1-carboxylate oxidase OS=Actin... [more]
ACCO2_DORSP1.060e-3391.671-aminocyclopropane-1-carboxylate oxidase 2 OS=Dor... [more]
ACCO_DIOKA1.384e-3390.281-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]
ACCO_DENCR1.808e-3390.281-aminocyclopropane-1-carboxylate oxidase OS=Dendr... [more]
ACCO3_CUCME3.083e-3386.111-aminocyclopropane-1-carboxylate oxidase 3 OS=Cuc... [more]

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Properties
Property NameValue
Genbank descriptionC06057B07 RindPdigS Citrus sinensis cDNA clone N14A04, mRNA sequence.