GR312992

Overview
NameGR312992
Unique NameGR312992
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13533 contig Csv1_Contig13533:554..769. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GR312992 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.187e-14
Identity = 34/67 (50.75%), Postives = 48/67 (71.64%), Query Frame = 1
Query:   16 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGK 216
            YPPCP+PDL  GL  H+D   + +L QD  + GLQ+L D  W+DVPP+  ++VVN+GD +++ITN K
Sbjct:  223 YPPCPQPDLTLGLTKHSDNSFLTILLQDH-IGGLQVLHDQYWVDVPPVPGALVVNVGDLLQLITNDK 288          
BLAST of GR312992 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.468e-14
Identity = 33/67 (49.25%), Postives = 47/67 (70.15%), Query Frame = 1
Query:   16 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGK 216
            YPPCP+P+L  G   HTD G + +L QDD + GLQ+L    W+DVPP   S+VVN+GD +++++N K
Sbjct:  221 YPPCPQPELTMGTIQHTDIGFVTILLQDD-MGGLQVLHQNHWVDVPPTPGSLVVNIGDFLQLLSNDK 286          
BLAST of GR312992 vs. ExPASy Swiss-Prot
Match: FLS_SOLTU (Flavonol synthase/flavanone 3-hydroxylase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.218e-13
Identity = 33/71 (46.48%), Postives = 51/71 (71.83%), Query Frame = 1
Query:    4 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGK 216
            K++ YPPCP+PDL  G+ AHTD   I LL  ++    +Q+ KDG W DV  + ++I+V++GDQ+E+++NGK
Sbjct:  219 KINYYPPCPRPDLALGVVAHTDMSYITLLVPNE----VQVFKDGHWYDVNYIPNAIIVHIGDQVEILSNGK 285          
BLAST of GR312992 vs. ExPASy Swiss-Prot
Match: FLS_EUSGR (Flavonol synthase/flavanone 3-hydroxylase OS=Eustoma grandiflorum GN=FLS PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.078e-13
Identity = 33/71 (46.48%), Postives = 52/71 (73.24%), Query Frame = 1
Query:    4 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGK 216
            K++ YPPCP+PDL  G+ AHTD   I +L  ++ V GLQ+ KDG W D   + ++++V++GDQ+E+++NGK
Sbjct:  202 KINYYPPCPRPDLALGV-AHTDMSAITVLVPNE-VPGLQVYKDGHWYDCKYIPNALIVHIGDQVEIMSNGK 270          
BLAST of GR312992 vs. ExPASy Swiss-Prot
Match: FLS1_ARATH (Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.714e-13
Identity = 33/71 (46.48%), Postives = 49/71 (69.01%), Query Frame = 1
Query:    4 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGK 216
            K++ YPPCP+PDL  G+ AHTD  GI LL  ++ V GLQ+ KD  W D   +  +++V++GDQI  ++NG+
Sbjct:  202 KINYYPPCPRPDLALGVPAHTDLSGITLLVPNE-VPGLQVFKDDHWFDAEYIPSAVIVHIGDQILRLSNGR 271          
BLAST of GR312992 vs. ExPASy Swiss-Prot
Match: G2OX8_ARATH (Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 4.629e-13
Identity = 31/70 (44.29%), Postives = 49/70 (70.00%), Query Frame = 1
Query:    4 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNG 213
            +++ YPPCPKP  + GL  HTD+  + +L+QD +V GLQL+KD +WI V P   ++++N+GD  +  +NG
Sbjct:  196 RMNRYPPCPKPSEVYGLMPHTDSDFLTILYQD-QVGGLQLIKDNRWIAVKPNPKALIINIGDLFQAWSNG 264          
BLAST of GR312992 vs. ExPASy Swiss-Prot
Match: FL3H_CALCH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Callistephus chinensis GN=FHT PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.031e-12
Identity = 37/72 (51.39%), Postives = 47/72 (65.28%), Query Frame = 1
Query:    7 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG--QWIDVPPLRHSIVVNLGDQIEVITNGK 216
            V+ YP CP+PDL  GL+ HTD G I LL Q D+V GLQ  +DG   WI V P+  + VVNLGD    ++NG+
Sbjct:  197 VNYYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATRDGGESWITVKPVEGAFVVNLGDHGHYLSNGR 267          
BLAST of GR312992 vs. ExPASy Swiss-Prot
Match: FL3H_VITVI (Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis vinifera GN=F3H PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.759e-12
Identity = 37/72 (51.39%), Postives = 47/72 (65.28%), Query Frame = 1
Query:    7 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG--QWIDVPPLRHSIVVNLGDQIEVITNGK 216
            V+ YP CP+PDL  GL+ HTD G I LL Q D+V GLQ  +DG   WI V P+  + VVNLGD    ++NG+
Sbjct:  200 VNFYPQCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGR 270          
BLAST of GR312992 vs. ExPASy Swiss-Prot
Match: FL3H_DIACA (Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.297e-12
Identity = 37/72 (51.39%), Postives = 47/72 (65.28%), Query Frame = 1
Query:    7 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG--QWIDVPPLRHSIVVNLGDQIEVITNGK 216
            V+ YP CP+PDL  GL+ HTD G I LL Q D+V GLQ  +DG   WI V P+  + VVNLGD    ++NG+
Sbjct:  200 VNYYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATRDGGKTWITVQPVPGAFVVNLGDHGHFLSNGR 270          
BLAST of GR312992 vs. ExPASy Swiss-Prot
Match: FL3H_PETHY (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Petunia hybrida GN=AN3 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.919e-12
Identity = 37/72 (51.39%), Postives = 46/72 (63.89%), Query Frame = 1
Query:    7 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG--QWIDVPPLRHSIVVNLGDQIEVITNGK 216
            V+ YP CP+PDL  GL+ HTD G I LL Q D+V GLQ  KD    WI V P+  + VVNLGD    ++NG+
Sbjct:  202 VNFYPKCPEPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATKDNGKTWITVQPVEGAFVVNLGDHGHFLSNGR 272          
The following BLAST results are available for this feature:
BLAST of GR312992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
ACCH1_ARATH4.187e-1450.751-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCH3_SOLLC5.468e-1449.251-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
FLS_SOLTU1.218e-1346.48Flavonol synthase/flavanone 3-hydroxylase OS=Solan... [more]
FLS_EUSGR2.078e-1346.48Flavonol synthase/flavanone 3-hydroxylase OS=Eusto... [more]
FLS1_ARATH2.714e-1346.48Flavonol synthase/flavanone 3-hydroxylase OS=Arabi... [more]
G2OX8_ARATH4.629e-1344.29Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis th... [more]
FL3H_CALCH1.031e-1251.39Naringenin,2-oxoglutarate 3-dioxygenase OS=Callist... [more]
FL3H_VITVI1.759e-1251.39Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis v... [more]
FL3H_DIACA2.297e-1251.39Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthu... [more]
FL3H_PETHY3.919e-1251.39Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]

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Properties
Property NameValue
Genbank descriptionC06057B07 RindPdigS Citrus sinensis cDNA clone N14A04, mRNA sequence.