GR312992

Overview
NameGR312992
Unique NameGR312992
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13533 contig Csv1_Contig13533:554..769. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GR312992 vs. ExPASy Swiss-Prot
Match: FNSI_PETCR (Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.118e-12
Identity = 35/72 (48.61%), Postives = 46/72 (63.89%), Query Frame = 1
Query:    7 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG--QWIDVPPLRHSIVVNLGDQIEVITNGK 216
            ++ YP CP+PDL  G+R HTD G I +L Q D V GLQ  +DG   WI V P+  + VVNLGD    ++NG+
Sbjct:  200 INYYPTCPQPDLTLGVRRHTDPGTITILLQ-DMVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGR 270          
BLAST of GR312992 vs. ExPASy Swiss-Prot
Match: FL3H_PETCR (Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.118e-12
Identity = 36/72 (50.00%), Postives = 47/72 (65.28%), Query Frame = 1
Query:    7 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG--QWIDVPPLRHSIVVNLGDQIEVITNGK 216
            V+ YP CP+P+L  GL+ HTD G I LL Q D+V GLQ  +DG   WI V P+  + VVNLGD    ++NG+
Sbjct:  200 VNYYPKCPQPNLTLGLKRHTDPGTITLLLQ-DQVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGR 270          
BLAST of GR312992 vs. ExPASy Swiss-Prot
Match: FL3H_HORVU (Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.118e-12
Identity = 37/72 (51.39%), Postives = 46/72 (63.89%), Query Frame = 1
Query:    7 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG--QWIDVPPLRHSIVVNLGDQIEVITNGK 216
            V+ YP CP+PDL  GL+ HTD G I LL Q D V GLQ  +DG   WI V P+  + VVNLGD    ++NG+
Sbjct:  202 VNFYPRCPQPDLTLGLKRHTDPGTITLLLQ-DLVGGLQATRDGGKNWITVQPISGAFVVNLGDHGHFMSNGR 272          
BLAST of GR312992 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 5.118e-12
Identity = 30/67 (44.78%), Postives = 48/67 (71.64%), Query Frame = 1
Query:   16 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGK 216
            YP CP+P+L  G   H+D+G + +L QD ++ GLQ+L + QWIDVP +  ++V+N+ D +++ITN K
Sbjct:  253 YPACPQPELTFGTSKHSDSGFLTILMQD-QIGGLQILLENQWIDVPFIPGALVINIADLLQLITNDK 318          
BLAST of GR312992 vs. ExPASy Swiss-Prot
Match: LDOX_PETHY (Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.684e-12
Identity = 29/71 (40.85%), Postives = 48/71 (67.61%), Query Frame = 1
Query:    4 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGK 216
            K++ YP CP+P+L  G+ AHTD   +  +  +  V GLQL  +GQW+    + +SI++++GD IE+++NGK
Sbjct:  217 KINYYPKCPQPELALGVEAHTDVSALTFILHN-MVPGLQLFYEGQWVTAKCVPNSIIMHIGDTIEILSNGK 286          
BLAST of GR312992 vs. ExPASy Swiss-Prot
Match: FL3H_MATIN (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.684e-12
Identity = 36/72 (50.00%), Postives = 46/72 (63.89%), Query Frame = 1
Query:    7 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKD--GQWIDVPPLRHSIVVNLGDQIEVITNGK 216
            V+ YP CP+PDL  GL+ HTD G I LL Q D+V GLQ  +D    WI V P+  + VVNLGD    ++NG+
Sbjct:  198 VNYYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATRDDGNTWITVQPVEGAFVVNLGDHGHFLSNGR 268          
BLAST of GR312992 vs. ExPASy Swiss-Prot
Match: FL3H_MALDO (Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.684e-12
Identity = 36/72 (50.00%), Postives = 47/72 (65.28%), Query Frame = 1
Query:    7 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG--QWIDVPPLRHSIVVNLGDQIEVITNGK 216
            V+ YP CP+PDL  GL+ HTD G I LL Q D+V GLQ  +D    WI V P+  + VVNLGD   +++NG+
Sbjct:  200 VNFYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATRDDGKTWITVQPVEGAFVVNLGDHGHLLSNGR 270          
BLAST of GR312992 vs. ExPASy Swiss-Prot
Match: FL3H_ARATH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabidopsis thaliana GN=F3H PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.684e-12
Identity = 36/72 (50.00%), Postives = 46/72 (63.89%), Query Frame = 1
Query:    7 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG--QWIDVPPLRHSIVVNLGDQIEVITNGK 216
            V+ YP CP+PDL  GL+ HTD G I LL Q D+V GLQ  +D    WI V P+  + VVNLGD    ++NG+
Sbjct:  199 VNYYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATRDNGKTWITVQPVEGAFVVNLGDHGHFLSNGR 269          
BLAST of GR312992 vs. ExPASy Swiss-Prot
Match: FLS_MATIN (Flavonol synthase/flavanone 3-hydroxylase (Fragment) OS=Matthiola incana PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.730e-12
Identity = 30/70 (42.86%), Postives = 47/70 (67.14%), Query Frame = 1
Query:    7 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGK 216
            +++YPP P  D   GL  HTD  G+ L+  ++ + GLQ+ KD  WI+V  +  +I+VN+GDQI +++NGK
Sbjct:  157 INHYPPYPHSDSFNGLEPHTDINGLTLIITNE-IPGLQVFKDDHWIEVEYIPSAIIVNIGDQIMMLSNGK 225          
BLAST of GR312992 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.730e-12
Identity = 28/67 (41.79%), Postives = 46/67 (68.66%), Query Frame = 1
Query:   16 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGK 216
            YPPCP+PDL  G   H+D   + +L  D ++ GLQ+ ++G W DVP +  ++++N+GD +++ITN K
Sbjct:  226 YPPCPEPDLTLGTSQHSDNSFLTVLLPD-QIEGLQVRREGHWFDVPHVSGALIINIGDLLQLITNDK 291          
The following BLAST results are available for this feature:
BLAST of GR312992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
FNSI_PETCR5.118e-1248.61Flavone synthase OS=Petroselinum crispum GN=FNSI P... [more]
FL3H_PETCR5.118e-1250.00Flavanone 3-dioxygenase OS=Petroselinum crispum GN... [more]
FL3H_HORVU5.118e-1251.39Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum... [more]
DV4H_CATRO5.118e-1244.78Deacetoxyvindoline 4-hydroxylase OS=Catharanthus r... [more]
LDOX_PETHY6.684e-1240.85Leucoanthocyanidin dioxygenase OS=Petunia hybrida ... [more]
FL3H_MATIN6.684e-1250.00Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
FL3H_MALDO6.684e-1250.00Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus d... [more]
FL3H_ARATH6.684e-1250.00Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabido... [more]
FLS_MATIN8.730e-1242.86Flavonol synthase/flavanone 3-hydroxylase (Fragmen... [more]
ACCH3_ARATH8.730e-1241.791-aminocyclopropane-1-carboxylate oxidase homolog ... [more]

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Properties
Property NameValue
Genbank descriptionC06057B07 RindPdigS Citrus sinensis cDNA clone N14A04, mRNA sequence.