GR312991

Overview
NameGR312991
Unique NameGR312991
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10242 contig Csv1_Contig10242:648..908. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GR312991 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 6.582e-39
Identity = 72/86 (83.72%), Postives = 80/86 (93.02%), Query Frame = 1
Query:    1 TFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAA 258
            TFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+IYN+ + W DHWIFWVGP +GA +AA
Sbjct:  183 TFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNQHKAWHDHWIFWVGPLIGAAIAA 268          
BLAST of GR312991 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 6.582e-39
Identity = 74/87 (85.06%), Postives = 80/87 (91.95%), Query Frame = 1
Query:    1 TFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAAL 261
            TF+LVYTVFSATDAKR ARDSHVPILAPLPIGFAVFLVHLAT+ ITGTGINPARSLGAA+IYN+   W DHWIFWVGPF+GA LAA+
Sbjct:  186 TFILVYTVFSATDAKRRARDSHVPILAPLPIGFAVFLVHLATMGITGTGINPARSLGAAVIYNQHHAWADHWIFWVGPFIGAALAAI 272          
BLAST of GR312991 vs. ExPASy Swiss-Prot
Match: PIP24_ORYSJ (Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica GN=PIP2-4 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 8.597e-39
Identity = 71/87 (81.61%), Postives = 80/87 (91.95%), Query Frame = 1
Query:    1 TFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAAL 261
            TFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLG A++YN ++ W D WIFWVGPF+GA +AAL
Sbjct:  180 TFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGVAVVYNNNKAWSDQWIFWVGPFIGAAIAAL 266          
BLAST of GR312991 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 1.123e-38
Identity = 71/86 (82.56%), Postives = 79/86 (91.86%), Query Frame = 1
Query:    1 TFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAA 258
            TFVLVYTVFSATD KR+ARDSH+P+LAPLPIGF+VF+VHLATIPITGTGINPARS GAA+IYN  + WDD WIFWVGPFVGA +AA
Sbjct:  177 TFVLVYTVFSATDPKRNARDSHIPVLAPLPIGFSVFMVHLATIPITGTGINPARSFGAAVIYNNQKAWDDQWIFWVGPFVGAAIAA 262          
BLAST of GR312991 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 1.123e-38
Identity = 71/86 (82.56%), Postives = 81/86 (94.19%), Query Frame = 1
Query:    1 TFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAA 258
            TFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS+GAA+I+N ++ W +HWIFWVGPFVGA +AA
Sbjct:  183 TFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVIFNNEKAWHNHWIFWVGPFVGAAIAA 268          
BLAST of GR312991 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.915e-38
Identity = 70/87 (80.46%), Postives = 80/87 (91.95%), Query Frame = 1
Query:    1 TFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAAL 261
            TFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIP+TGTGINPARS G A+I+N D+ WDD WI+WVGPFVGA +AA+
Sbjct:  180 TFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGPAVIFNNDKAWDDQWIYWVGPFVGAAVAAI 266          
BLAST of GR312991 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 1.915e-38
Identity = 72/86 (83.72%), Postives = 79/86 (91.86%), Query Frame = 1
Query:    1 TFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAA 258
            TFVLVYTVFSATD KRSARDSH+P+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN ++ WDD WIFWVGPF+GA  AA
Sbjct:  171 TFVLVYTVFSATDPKRSARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPFLGALAAA 256          
BLAST of GR312991 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 3.267e-38
Identity = 71/86 (82.56%), Postives = 78/86 (90.70%), Query Frame = 1
Query:    1 TFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAA 258
            TFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN ++ WDD WIFWVGP +GA  AA
Sbjct:  178 TFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPMIGAAAAA 263          
BLAST of GR312991 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 3.058e-36
Identity = 68/86 (79.07%), Postives = 77/86 (89.53%), Query Frame = 1
Query:    1 TFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAA 258
            TF+LVYTVFSATD KR+ARDS +P+L PLPIGFAVF+VHLATIPITGTGINPARSLGAA++YN+   W DHWIFWVGP +GA LAA
Sbjct:  180 TFILVYTVFSATDPKRTARDSFIPVLVPLPIGFAVFVVHLATIPITGTGINPARSLGAAVLYNQHAAWKDHWIFWVGPVIGAFLAA 265          
BLAST of GR312991 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 8.617e-31
Identity = 64/89 (71.91%), Postives = 70/89 (78.65%), Query Frame = 1
Query:    1 TFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII--YNKDRGWDDHWIFWVGPFVGAGLAAL 261
            TFVLVYTVFSATD KR ARDSHVP+LAPLPIG AV +VHLATIPITGTGINPARSLG A++      + W   WIFWVGPF GA  A +
Sbjct:  168 TFVLVYTVFSATDPKRKARDSHVPVLAPLPIGLAVLVVHLATIPITGTGINPARSLGPALVLGLGTTKAWSHLWIFWVGPFAGAAAAMI 256          
The following BLAST results are available for this feature:
BLAST of GR312991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 103
Match NameE-valueIdentityDescription
PIP23_ORYSJ6.582e-3983.72Probable aquaporin PIP2-3 OS=Oryza sativa subsp. j... [more]
PIP11_MAIZE6.582e-3985.06Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1[more]
PIP24_ORYSJ8.597e-3981.61Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica G... [more]
PIP26_ARATH1.123e-3882.56Probable aquaporin PIP2-6 OS=Arabidopsis thaliana ... [more]
PIP21_ORYSJ1.123e-3882.56Probable aquaporin PIP2-1 OS=Oryza sativa subsp. j... [more]
PIP27_MAIZE1.915e-3880.46Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1[more]
PIP27_ARATH1.915e-3883.72Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7... [more]
PIP24_ARATH3.267e-3882.56Probable aquaporin PIP2-4 OS=Arabidopsis thaliana ... [more]
PIP27_ORYSJ3.058e-3679.07Probable aquaporin PIP2-7 OS=Oryza sativa subsp. j... [more]
PIP28_ORYSJ8.617e-3171.91Probable aquaporin PIP2-8 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionC06057B05 RindPdigS Citrus sinensis cDNA clone N13F07, mRNA sequence.