GR312991

Overview
NameGR312991
Unique NameGR312991
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10242 contig Csv1_Contig10242:648..908. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GR312991 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3)

HSP 1 Score: 79.7221 bits (195), Expect = 5.075e-15
Identity = 43/87 (49.43%), Postives = 51/87 (58.62%), Query Frame = 1
Query:    1 TFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAAL 261
            T  LV  V + TD +R          APL IGF+V L HL  I  TG GINPARS G+A+I      + DHW+FWVGPF+G  LA L
Sbjct:  148 TLQLVLCVLATTDRRRRDLGGS----APLAIGFSVALGHLLAIDYTGCGINPARSFGSAVI---THNFQDHWVFWVGPFIGGALAVL 227          
BLAST of GR312991 vs. ExPASy Swiss-Prot
Match: AQP1_SHEEP (Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 6.628e-15
Identity = 45/87 (51.72%), Postives = 54/87 (62.07%), Query Frame = 1
Query:    1 TFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAAL 261
            T  LV  V + TD +R  RD  +    PL IGF+V L HL  I  TG GINPARS G+++I      + DHWIFWVGPF+GA LA L
Sbjct:  148 TLQLVLCVLATTDRRRR-RD--LGDSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVI---THNFQDHWIFWVGPFIGAALAVL 228          
BLAST of GR312991 vs. ExPASy Swiss-Prot
Match: AQP1_BOVIN (Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 8.657e-15
Identity = 43/87 (49.43%), Postives = 51/87 (58.62%), Query Frame = 1
Query:    1 TFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAAL 261
            T  LV  V + TD +R           PL IGF+V L HL  I  TG GINPARS G+++I      + DHWIFWVGPF+GA LA L
Sbjct:  148 TLQLVLCVLATTDRRRRDLGGS----GPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVI---THNFQDHWIFWVGPFIGAALAVL 227          
BLAST of GR312991 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.477e-14
Identity = 40/85 (47.06%), Postives = 54/85 (63.53%), Query Frame = 1
Query:    1 TFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLA 255
            TF LV+T+F++ D+KR+     V     L IGF+V + HL  I  TG  +NPARS G A+I      W++HWI+WVGP +GA LA
Sbjct:  167 TFQLVFTIFASCDSKRTDVTGSVA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIGAVLA 244          
BLAST of GR312991 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.929e-14
Identity = 39/85 (45.88%), Postives = 54/85 (63.53%), Query Frame = 1
Query:    1 TFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLA 255
            TF LV+T+F++ D+KR+     +     L IGF+V + HL  I  TG  +NPARS G A+I      W++HWI+WVGP +GA LA
Sbjct:  170 TFQLVFTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIGAVLA 247          
BLAST of GR312991 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 1.929e-14
Identity = 39/85 (45.88%), Postives = 54/85 (63.53%), Query Frame = 1
Query:    1 TFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLA 255
            TF LV+T+F++ D+KR+     +     L IGF+V + HL  I  TG  +NPARS G A+I      W++HWI+WVGP +GA LA
Sbjct:  167 TFQLVFTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIGAVLA 244          
BLAST of GR312991 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.929e-14
Identity = 39/85 (45.88%), Postives = 54/85 (63.53%), Query Frame = 1
Query:    1 TFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLA 255
            TF LV+T+F++ D+KR+     +     L IGF+V + HL  I  TG  +NPARS G A+I      W++HWI+WVGP +GA LA
Sbjct:  167 TFQLVFTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIGAVLA 244          
BLAST of GR312991 vs. ExPASy Swiss-Prot
Match: AQP1_RAT (Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4)

HSP 1 Score: 77.411 bits (189), Expect = 2.519e-14
Identity = 42/87 (48.28%), Postives = 52/87 (59.77%), Query Frame = 1
Query:    1 TFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAAL 261
            T  LV  V + TD +R          APL IG +V L HL  I  TG GINPARS G+A++    R + +HWIFWVGPF+G+ LA L
Sbjct:  146 TLQLVLCVLATTDRRRRDLGGS----APLAIGLSVALGHLLAIDYTGCGINPARSFGSAVL---TRNFSNHWIFWVGPFIGSALAVL 225          
BLAST of GR312991 vs. ExPASy Swiss-Prot
Match: AQP1_MOUSE (Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 3.290e-14
Identity = 42/87 (48.28%), Postives = 51/87 (58.62%), Query Frame = 1
Query:    1 TFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAAL 261
            T  LV  V + TD +R          APL IG +V L HL  I  TG GINPARS G+A++    R + +HWIFWVGPF+G  LA L
Sbjct:  146 TLQLVLCVLATTDRRRRDLGGS----APLAIGLSVALGHLLAIDYTGCGINPARSFGSAVL---TRNFSNHWIFWVGPFIGGALAVL 225          
BLAST of GR312991 vs. ExPASy Swiss-Prot
Match: AQP1_PONAB (Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 7.329e-14
Identity = 42/87 (48.28%), Postives = 50/87 (57.47%), Query Frame = 1
Query:    1 TFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAAL 261
            T  LV  V + TD +R          APL IG +V L HL  I  TG GINPARS G+A+I      + +HWIFWVGPF+G  LA L
Sbjct:  146 TLQLVLCVLATTDRRRRDLGGS----APLAIGLSVALGHLLAIDYTGCGINPARSFGSAVI---THNFSNHWIFWVGPFIGGALAVL 225          
The following BLAST results are available for this feature:
BLAST of GR312991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 103
Match NameE-valueIdentityDescription
AQP1_PIG5.075e-1549.43Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3[more]
AQP1_SHEEP6.628e-1551.72Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3[more]
AQP1_BOVIN8.657e-1549.43Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3[more]
AQP4_RAT1.477e-1447.06Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1[more]
AQP4_NOTAL1.929e-1445.88Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1[more]
AQP4_HUMAN1.929e-1445.88Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2[more]
AQP4_DIPME1.929e-1445.88Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=... [more]
AQP1_RAT2.519e-1448.28Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4[more]
AQP1_MOUSE3.290e-1448.28Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3[more]
AQP1_PONAB7.329e-1448.28Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3[more]

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Properties
Property NameValue
Genbank descriptionC06057B05 RindPdigS Citrus sinensis cDNA clone N13F07, mRNA sequence.