GR312991

Overview
NameGR312991
Unique NameGR312991
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10242 contig Csv1_Contig10242:648..908. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GR312991 vs. ExPASy Swiss-Prot
Match: AQP1_HUMAN (Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 7.329e-14
Identity = 42/87 (48.28%), Postives = 50/87 (57.47%), Query Frame = 1
Query:    1 TFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAAL 261
            T  LV  V + TD +R          APL IG +V L HL  I  TG GINPARS G+A+I      + +HWIFWVGPF+G  LA L
Sbjct:  146 TLQLVLCVLATTDRRRRDLGGS----APLAIGLSVALGHLLAIDYTGCGINPARSFGSAVI---THNFSNHWIFWVGPFIGGALAVL 225          
BLAST of GR312991 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 9.571e-14
Identity = 39/85 (45.88%), Postives = 53/85 (62.35%), Query Frame = 1
Query:    1 TFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLA 255
            TF LV+T+F++ D+KR+     +     L IGF+V + HL  I  TG  +NPARS G A+I      W +HWI+WVGP +GA LA
Sbjct:  167 TFQLVFTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWANHWIYWVGPIMGAVLA 244          
BLAST of GR312991 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 9.571e-14
Identity = 38/85 (44.71%), Postives = 53/85 (62.35%), Query Frame = 1
Query:    1 TFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLA 255
            TF LV+T+F++ D+KR+     +     L IG +V + HL  I  TG  +NPARS G A+I      W++HWI+WVGP +GA LA
Sbjct:  167 TFQLVFTIFASCDSKRTDVTGSIA----LAIGISVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLA 244          
BLAST of GR312991 vs. ExPASy Swiss-Prot
Match: AQP_HAEIX (Aquaporin OS=Haematobia irritans exigua PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.250e-13
Identity = 38/87 (43.68%), Postives = 52/87 (59.77%), Query Frame = 1
Query:    1 TFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAAL 261
            TF+LV  V   +D  R+     +   APL +G ++   HL  I +TG  +NPARS G A++ N    W DHW++WVGP VGA +AAL
Sbjct:  152 TFILVVVVKGVSDPGRT----DIKGSAPLAVGLSIAAGHLCAIKLTGASMNPARSFGPAVVQNM---WIDHWVYWVGPIVGAIVAAL 231          
BLAST of GR312991 vs. ExPASy Swiss-Prot
Match: AQP5_RAT (Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.250e-13
Identity = 42/88 (47.73%), Postives = 56/88 (63.64%), Query Frame = 1
Query:    1 TFVLVYTVFSATDAKRSARDSHVPILAP-LPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAAL 261
            TF L   +FS+TD++R++     P+ +P L IG +V L HL  I  TG  +NPARS G A++ N  R    HW+FWVGP VGA LAA+
Sbjct:  139 TFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN--RFSPSHWVFWVGPIVGAMLAAI 219          
BLAST of GR312991 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.250e-13
Identity = 41/88 (46.59%), Postives = 56/88 (63.64%), Query Frame = 1
Query:    1 TFVLVYTVFSATDAKRSARDSHVPILAP-LPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAAL 261
            TF L   +FS+TD++R++     P+ +P L IG +V L HL  I  TG  +NPARS G A++ N  R    HW+FWVGP VGA +AA+
Sbjct:  139 TFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN--RFSPSHWVFWVGPIVGAAVAAI 219          
BLAST of GR312991 vs. ExPASy Swiss-Prot
Match: AQP5_MOUSE (Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.250e-13
Identity = 42/88 (47.73%), Postives = 56/88 (63.64%), Query Frame = 1
Query:    1 TFVLVYTVFSATDAKRSARDSHVPILAP-LPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAAL 261
            TF L   +FS+TD++R++     P+ +P L IG +V L HL  I  TG  +NPARS G A++ N  R    HW+FWVGP VGA LAA+
Sbjct:  139 TFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN--RFSPSHWVFWVGPIVGAVLAAI 219          
BLAST of GR312991 vs. ExPASy Swiss-Prot
Match: AQP2_SHEEP (Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.250e-13
Identity = 41/87 (47.13%), Postives = 53/87 (60.92%), Query Frame = 1
Query:    1 TFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAAL 261
            T  LV  +F +TD +R  +  H      L IGF+V L HL  I  TG  +NPARSL  AI+  K   +DDHW+FW+GP VGA +A+L
Sbjct:  138 TLQLVLCIFPSTDKRRGKQLGH----PALSIGFSVALGHLLGIHYTGCSMNPARSLAPAIVTGK---FDDHWVFWIGPLVGAIVASL 217          
BLAST of GR312991 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 1.633e-13
Identity = 39/87 (44.83%), Postives = 52/87 (59.77%), Query Frame = 1
Query:    1 TFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAAL 261
            T   +  VF++ D +   R    P  A LP+GF++ L HL  IP TG G+NPARS   A+I    R + +HW+FW GP +GA LAAL
Sbjct:  138 TAQFILCVFASFDDRHDGR----PGSAALPVGFSLALGHLFGIPFTGAGMNPARSFAPAVI---TRNFTNHWVFWAGPLLGAALAAL 217          
BLAST of GR312991 vs. ExPASy Swiss-Prot
Match: AQP1_CANFA (Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 1.633e-13
Identity = 41/87 (47.13%), Postives = 49/87 (56.32%), Query Frame = 1
Query:    1 TFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAAL 261
            T  LV  V + TD +R           PL IG +V L HL  I  TG GINPARS G+++I      + DHWIFWVGPF+G  LA L
Sbjct:  148 TLQLVLCVLATTDRRRRDLGGS----GPLAIGLSVALGHLLAIDYTGCGINPARSFGSSVI---THNFKDHWIFWVGPFIGGALAVL 227          
The following BLAST results are available for this feature:
BLAST of GR312991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 103
Match NameE-valueIdentityDescription
AQP1_HUMAN7.329e-1448.28Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3[more]
AQP4_MOUSE9.571e-1445.88Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2[more]
AQP4_BOVIN9.571e-1444.71Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3[more]
AQP_HAEIX1.250e-1343.68Aquaporin OS=Haematobia irritans exigua PE=2 SV=1[more]
AQP5_RAT1.250e-1347.73Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1[more]
AQP5_PIG1.250e-1346.59Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]
AQP5_MOUSE1.250e-1347.73Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1[more]
AQP2_SHEEP1.250e-1347.13Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1[more]
MIP_CHICK1.633e-1344.83Lens fiber major intrinsic protein OS=Gallus gallu... [more]
AQP1_CANFA1.633e-1347.13Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3[more]

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Properties
Property NameValue
Genbank descriptionC06057B05 RindPdigS Citrus sinensis cDNA clone N13F07, mRNA sequence.