GR312986

Overview
NameGR312986
Unique NameGR312986
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GR312986 vs. ExPASy Swiss-Prot
Match: EF1A3_HUMAN (Putative elongation factor 1-alpha-like 3 OS=Homo sapiens GN=EEF1AL3 PE=5 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.034e-20
Identity = 46/60 (76.67%), Postives = 53/60 (88.33%), Query Frame = 1
Query:    1 TGXATETSPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPLGRFAVRDVRQTVAVGVIKSVE 180
            +G   E  PKF+KSGDAAIV MVP KPMCVE+F+DYPPLGRFAVRD+RQTVAVGVIK+V+
Sbjct:  383 SGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVD 442          
BLAST of GR312986 vs. ExPASy Swiss-Prot
Match: EF1A2_XENLA (Elongation factor 1-alpha, oocyte form OS=Xenopus laevis GN=eef1ao PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.034e-20
Identity = 45/60 (75.00%), Postives = 53/60 (88.33%), Query Frame = 1
Query:    1 TGXATETSPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPLGRFAVRDVRQTVAVGVIKSVE 180
            +G   E  PKF+KSGDAAIV+M+P KPMCVE+F+DYPPLGRFAVRD+RQTVAVGVIK V+
Sbjct:  383 SGKKLEDDPKFLKSGDAAIVEMIPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKGVD 442          
BLAST of GR312986 vs. ExPASy Swiss-Prot
Match: EF1A1_RAT (Elongation factor 1-alpha 1 OS=Rattus norvegicus GN=Eef1a1 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.034e-20
Identity = 46/60 (76.67%), Postives = 53/60 (88.33%), Query Frame = 1
Query:    1 TGXATETSPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPLGRFAVRDVRQTVAVGVIKSVE 180
            +G   E  PKF+KSGDAAIV MVP KPMCVE+F+DYPPLGRFAVRD+RQTVAVGVIK+V+
Sbjct:  383 SGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVD 442          
BLAST of GR312986 vs. ExPASy Swiss-Prot
Match: EF1A1_RABIT (Elongation factor 1-alpha 1 OS=Oryctolagus cuniculus GN=EEF1A1 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.034e-20
Identity = 46/60 (76.67%), Postives = 53/60 (88.33%), Query Frame = 1
Query:    1 TGXATETSPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPLGRFAVRDVRQTVAVGVIKSVE 180
            +G   E  PKF+KSGDAAIV MVP KPMCVE+F+DYPPLGRFAVRD+RQTVAVGVIK+V+
Sbjct:  383 SGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVD 442          
BLAST of GR312986 vs. ExPASy Swiss-Prot
Match: EF1A1_PONAB (Elongation factor 1-alpha 1 OS=Pongo abelii GN=EEF1A1 PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 1.034e-20
Identity = 46/60 (76.67%), Postives = 53/60 (88.33%), Query Frame = 1
Query:    1 TGXATETSPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPLGRFAVRDVRQTVAVGVIKSVE 180
            +G   E  PKF+KSGDAAIV MVP KPMCVE+F+DYPPLGRFAVRD+RQTVAVGVIK+V+
Sbjct:  383 SGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVD 442          
BLAST of GR312986 vs. ExPASy Swiss-Prot
Match: EF1A1_PANTR (Elongation factor 1-alpha 1 OS=Pan troglodytes GN=EEF1A1 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.034e-20
Identity = 46/60 (76.67%), Postives = 53/60 (88.33%), Query Frame = 1
Query:    1 TGXATETSPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPLGRFAVRDVRQTVAVGVIKSVE 180
            +G   E  PKF+KSGDAAIV MVP KPMCVE+F+DYPPLGRFAVRD+RQTVAVGVIK+V+
Sbjct:  383 SGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVD 442          
BLAST of GR312986 vs. ExPASy Swiss-Prot
Match: EF1A1_MOUSE (Elongation factor 1-alpha 1 OS=Mus musculus GN=Eef1a1 PE=1 SV=3)

HSP 1 Score: 98.5969 bits (244), Expect = 1.034e-20
Identity = 46/60 (76.67%), Postives = 53/60 (88.33%), Query Frame = 1
Query:    1 TGXATETSPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPLGRFAVRDVRQTVAVGVIKSVE 180
            +G   E  PKF+KSGDAAIV MVP KPMCVE+F+DYPPLGRFAVRD+RQTVAVGVIK+V+
Sbjct:  383 SGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVD 442          
BLAST of GR312986 vs. ExPASy Swiss-Prot
Match: EF1A1_HUMAN (Elongation factor 1-alpha 1 OS=Homo sapiens GN=EEF1A1 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.034e-20
Identity = 46/60 (76.67%), Postives = 53/60 (88.33%), Query Frame = 1
Query:    1 TGXATETSPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPLGRFAVRDVRQTVAVGVIKSVE 180
            +G   E  PKF+KSGDAAIV MVP KPMCVE+F+DYPPLGRFAVRD+RQTVAVGVIK+V+
Sbjct:  383 SGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVD 442          
BLAST of GR312986 vs. ExPASy Swiss-Prot
Match: EF1A1_HORSE (Elongation factor 1-alpha 1 OS=Equus caballus GN=EEF1A1 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.034e-20
Identity = 46/60 (76.67%), Postives = 53/60 (88.33%), Query Frame = 1
Query:    1 TGXATETSPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPLGRFAVRDVRQTVAVGVIKSVE 180
            +G   E  PKF+KSGDAAIV MVP KPMCVE+F+DYPPLGRFAVRD+RQTVAVGVIK+V+
Sbjct:  383 SGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVD 442          
BLAST of GR312986 vs. ExPASy Swiss-Prot
Match: EF1A1_FELCA (Elongation factor 1-alpha 1 OS=Felis catus GN=EEF1A1 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.034e-20
Identity = 46/60 (76.67%), Postives = 53/60 (88.33%), Query Frame = 1
Query:    1 TGXATETSPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPLGRFAVRDVRQTVAVGVIKSVE 180
            +G   E  PKF+KSGDAAIV MVP KPMCVE+F+DYPPLGRFAVRD+RQTVAVGVIK+V+
Sbjct:  383 SGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVD 442          
The following BLAST results are available for this feature:
BLAST of GR312986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135
Match NameE-valueIdentityDescription
EF1A3_HUMAN1.034e-2076.67Putative elongation factor 1-alpha-like 3 OS=Homo ... [more]
EF1A2_XENLA1.034e-2075.00Elongation factor 1-alpha, oocyte form OS=Xenopus ... [more]
EF1A1_RAT1.034e-2076.67Elongation factor 1-alpha 1 OS=Rattus norvegicus G... [more]
EF1A1_RABIT1.034e-2076.67Elongation factor 1-alpha 1 OS=Oryctolagus cunicul... [more]
EF1A1_PONAB1.034e-2076.67Elongation factor 1-alpha 1 OS=Pongo abelii GN=EEF... [more]
EF1A1_PANTR1.034e-2076.67Elongation factor 1-alpha 1 OS=Pan troglodytes GN=... [more]
EF1A1_MOUSE1.034e-2076.67Elongation factor 1-alpha 1 OS=Mus musculus GN=Eef... [more]
EF1A1_HUMAN1.034e-2076.67Elongation factor 1-alpha 1 OS=Homo sapiens GN=EEF... [more]
EF1A1_HORSE1.034e-2076.67Elongation factor 1-alpha 1 OS=Equus caballus GN=E... [more]
EF1A1_FELCA1.034e-2076.67Elongation factor 1-alpha 1 OS=Felis catus GN=EEF1... [more]

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Properties
Property NameValue
Genbank descriptionC06057A12 RindPdigS Citrus sinensis cDNA clone N11D06, mRNA sequence.