GR312986

Overview
NameGR312986
Unique NameGR312986
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GR312986 vs. ExPASy Swiss-Prot
Match: EF1A1_DROME (Elongation factor 1-alpha 1 OS=Drosophila melanogaster GN=Ef1alpha48D PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 1.034e-20
Identity = 46/59 (77.97%), Postives = 54/59 (91.53%), Query Frame = 1
Query:    1 TGXATETSPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPLGRFAVRDVRQTVAVGVIKSV 177
            +G  TE +PKFIKSGDAAIV +VPSKP+CVEAF ++PPLGRFAVRD+RQTVAVGVIK+V
Sbjct:  383 SGKTTEENPKFIKSGDAAIVNLVPSKPLCVEAFQEFPPLGRFAVRDMRQTVAVGVIKAV 441          
BLAST of GR312986 vs. ExPASy Swiss-Prot
Match: EF1A1_CRIGR (Elongation factor 1-alpha 1 OS=Cricetulus griseus GN=EEF1A1 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.034e-20
Identity = 46/60 (76.67%), Postives = 53/60 (88.33%), Query Frame = 1
Query:    1 TGXATETSPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPLGRFAVRDVRQTVAVGVIKSVE 180
            +G   E  PKF+KSGDAAIV MVP KPMCVE+F+DYPPLGRFAVRD+RQTVAVGVIK+V+
Sbjct:  383 SGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVD 442          
BLAST of GR312986 vs. ExPASy Swiss-Prot
Match: EF1A1_BOVIN (Elongation factor 1-alpha 1 OS=Bos taurus GN=EEF1A1 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.034e-20
Identity = 46/60 (76.67%), Postives = 53/60 (88.33%), Query Frame = 1
Query:    1 TGXATETSPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPLGRFAVRDVRQTVAVGVIKSVE 180
            +G   E  PKF+KSGDAAIV MVP KPMCVE+F+DYPPLGRFAVRD+RQTVAVGVIK+V+
Sbjct:  383 SGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVD 442          
BLAST of GR312986 vs. ExPASy Swiss-Prot
Match: EF1A_CHICK (Elongation factor 1-alpha 1 OS=Gallus gallus GN=EEF1A PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.351e-20
Identity = 45/60 (75.00%), Postives = 53/60 (88.33%), Query Frame = 1
Query:    1 TGXATETSPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPLGRFAVRDVRQTVAVGVIKSVE 180
            +G   E  PKF+KSGDAAIV M+P KPMCVE+F+DYPPLGRFAVRD+RQTVAVGVIK+V+
Sbjct:  383 SGKKLEDGPKFLKSGDAAIVDMIPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVD 442          
BLAST of GR312986 vs. ExPASy Swiss-Prot
Match: EF1A3_XENLA (Elongation factor 1-alpha, oocyte form OS=Xenopus laevis PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 1.351e-20
Identity = 45/60 (75.00%), Postives = 52/60 (86.67%), Query Frame = 1
Query:    1 TGXATETSPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPLGRFAVRDVRQTVAVGVIKSVE 180
            +G   E  PKF+KSGDAAIV+M+P KPMCVE F+DYPPLGRFAVRD+RQTVAVGVIK V+
Sbjct:  383 SGKKLEDDPKFLKSGDAAIVEMIPGKPMCVETFSDYPPLGRFAVRDMRQTVAVGVIKGVD 442          
BLAST of GR312986 vs. ExPASy Swiss-Prot
Match: EF1A_CRYNE (Elongation factor 1-alpha OS=Cryptococcus neoformans GN=TEF1 PE=2 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 1.764e-20
Identity = 45/60 (75.00%), Postives = 52/60 (86.67%), Query Frame = 1
Query:    1 TGXATETSPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPLGRFAVRDVRQTVAVGVIKSVE 180
            TG   E +PKF+KSGDAAIVK+V  KP+CVE + DYPPLGRFAVRD+RQTVAVGVIKSV+
Sbjct:  381 TGKVMEAAPKFVKSGDAAIVKLVAQKPLCVETYADYPPLGRFAVRDMRQTVAVGVIKSVD 440          
BLAST of GR312986 vs. ExPASy Swiss-Prot
Match: EF1A2_DROME (Elongation factor 1-alpha 2 OS=Drosophila melanogaster GN=Ef1alpha100E PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 1.764e-20
Identity = 46/59 (77.97%), Postives = 53/59 (89.83%), Query Frame = 1
Query:    1 TGXATETSPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPLGRFAVRDVRQTVAVGVIKSV 177
            TG  TET PK IKSGDAAI+ +VPSKP+CVE+F ++PPLGRFAVRD+RQTVAVGVIKSV
Sbjct:  383 TGKTTETEPKAIKSGDAAIIVLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKSV 441          
BLAST of GR312986 vs. ExPASy Swiss-Prot
Match: EF1A_CAEEL (Elongation factor 1-alpha OS=Caenorhabditis elegans GN=eft-3 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.304e-20
Identity = 45/60 (75.00%), Postives = 53/60 (88.33%), Query Frame = 1
Query:    1 TGXATETSPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPLGRFAVRDVRQTVAVGVIKSVE 180
            TG   E  PKF+KSGDA IV+++P+KP+CVE+FTDY PLGRFAVRD+RQTVAVGVIKSVE
Sbjct:  383 TGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDMRQTVAVGVIKSVE 442          
BLAST of GR312986 vs. ExPASy Swiss-Prot
Match: EF1A_BOMMO (Elongation factor 1-alpha OS=Bombyx mori PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 3.930e-20
Identity = 45/59 (76.27%), Postives = 54/59 (91.53%), Query Frame = 1
Query:    1 TGXATETSPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPLGRFAVRDVRQTVAVGVIKSV 177
            TG +TE +PK IKSGDAAIV +VPSKP+CVE+F ++PPLGRFAVRD+RQTVAVGVIK+V
Sbjct:  383 TGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 441          
BLAST of GR312986 vs. ExPASy Swiss-Prot
Match: EF1A_DANRE (Elongation factor 1-alpha OS=Danio rerio GN=eef1a PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.133e-20
Identity = 46/60 (76.67%), Postives = 53/60 (88.33%), Query Frame = 1
Query:    1 TGXATETSPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPLGRFAVRDVRQTVAVGVIKSVE 180
            +G   E +PK +KSGDAAIV+MVP KPMCVE+F+ YPPLGRFAVRD+RQTVAVGVIKSVE
Sbjct:  383 SGKKLEDNPKALKSGDAAIVEMVPGKPMCVESFSTYPPLGRFAVRDMRQTVAVGVIKSVE 442          
The following BLAST results are available for this feature:
BLAST of GR312986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135
Match NameE-valueIdentityDescription
EF1A1_DROME1.034e-2077.97Elongation factor 1-alpha 1 OS=Drosophila melanoga... [more]
EF1A1_CRIGR1.034e-2076.67Elongation factor 1-alpha 1 OS=Cricetulus griseus ... [more]
EF1A1_BOVIN1.034e-2076.67Elongation factor 1-alpha 1 OS=Bos taurus GN=EEF1A... [more]
EF1A_CHICK1.351e-2075.00Elongation factor 1-alpha 1 OS=Gallus gallus GN=EE... [more]
EF1A3_XENLA1.351e-2075.00Elongation factor 1-alpha, oocyte form OS=Xenopus ... [more]
EF1A_CRYNE1.764e-2075.00Elongation factor 1-alpha OS=Cryptococcus neoforma... [more]
EF1A2_DROME1.764e-2077.97Elongation factor 1-alpha 2 OS=Drosophila melanoga... [more]
EF1A_CAEEL2.304e-2075.00Elongation factor 1-alpha OS=Caenorhabditis elegan... [more]
EF1A_BOMMO3.930e-2076.27Elongation factor 1-alpha OS=Bombyx mori PE=2 SV=1[more]
EF1A_DANRE5.133e-2076.67Elongation factor 1-alpha OS=Danio rerio GN=eef1a ... [more]

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Properties
Property NameValue
Genbank descriptionC06057A12 RindPdigS Citrus sinensis cDNA clone N11D06, mRNA sequence.