GR312986

Overview
NameGR312986
Unique NameGR312986
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GR312986 vs. ExPASy Swiss-Prot
Match: EF1A_APIME (Elongation factor 1-alpha OS=Apis mellifera PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.756e-20
Identity = 46/59 (77.97%), Postives = 52/59 (88.14%), Query Frame = 1
Query:    1 TGXATETSPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPLGRFAVRDVRQTVAVGVIKSV 177
            TG  TE +PK IKSGDAAIV + P+KPMCVEAF ++PPLGRFAVRD+RQTVAVGVIKSV
Sbjct:  383 TGKTTEENPKSIKSGDAAIVMLQPTKPMCVEAFQEFPPLGRFAVRDMRQTVAVGVIKSV 441          
BLAST of GR312986 vs. ExPASy Swiss-Prot
Match: EF1A2_RAT (Elongation factor 1-alpha 2 OS=Rattus norvegicus GN=Eef1a2 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.756e-20
Identity = 45/60 (75.00%), Postives = 53/60 (88.33%), Query Frame = 1
Query:    1 TGXATETSPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPLGRFAVRDVRQTVAVGVIKSVE 180
            +G   E +PK +KSGDAAIV+MVP KPMCVE+F+ YPPLGRFAVRD+RQTVAVGVIK+VE
Sbjct:  383 SGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVE 442          
BLAST of GR312986 vs. ExPASy Swiss-Prot
Match: EF1A2_RABIT (Elongation factor 1-alpha 2 OS=Oryctolagus cuniculus GN=EEF1A2 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.756e-20
Identity = 45/60 (75.00%), Postives = 53/60 (88.33%), Query Frame = 1
Query:    1 TGXATETSPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPLGRFAVRDVRQTVAVGVIKSVE 180
            +G   E +PK +KSGDAAIV+MVP KPMCVE+F+ YPPLGRFAVRD+RQTVAVGVIK+VE
Sbjct:  383 SGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVE 442          
BLAST of GR312986 vs. ExPASy Swiss-Prot
Match: EF1A2_OSCTI (Elongation factor 1-alpha 2 OS=Oscheius tipulae GN=eft-2 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.756e-20
Identity = 44/59 (74.58%), Postives = 51/59 (86.44%), Query Frame = 1
Query:    1 TGXATETSPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPLGRFAVRDVRQTVAVGVIKSV 177
            TG   E  PKF+KSGDA IV+++P+KP+CVEAFTDY PLGRFAVRD+RQTVAVGVIK V
Sbjct:  383 TGKKVEDPPKFLKSGDAGIVELIPTKPLCVEAFTDYAPLGRFAVRDMRQTVAVGVIKGV 441          
BLAST of GR312986 vs. ExPASy Swiss-Prot
Match: EF1A2_MOUSE (Elongation factor 1-alpha 2 OS=Mus musculus GN=Eef1a2 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.756e-20
Identity = 45/60 (75.00%), Postives = 53/60 (88.33%), Query Frame = 1
Query:    1 TGXATETSPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPLGRFAVRDVRQTVAVGVIKSVE 180
            +G   E +PK +KSGDAAIV+MVP KPMCVE+F+ YPPLGRFAVRD+RQTVAVGVIK+VE
Sbjct:  383 SGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVE 442          
BLAST of GR312986 vs. ExPASy Swiss-Prot
Match: EF1A2_HUMAN (Elongation factor 1-alpha 2 OS=Homo sapiens GN=EEF1A2 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.756e-20
Identity = 45/60 (75.00%), Postives = 53/60 (88.33%), Query Frame = 1
Query:    1 TGXATETSPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPLGRFAVRDVRQTVAVGVIKSVE 180
            +G   E +PK +KSGDAAIV+MVP KPMCVE+F+ YPPLGRFAVRD+RQTVAVGVIK+VE
Sbjct:  383 SGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVE 442          
BLAST of GR312986 vs. ExPASy Swiss-Prot
Match: EF1A2_BOVIN (Elongation factor 1-alpha 2 OS=Bos taurus GN=EEF1A2 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.756e-20
Identity = 45/60 (75.00%), Postives = 53/60 (88.33%), Query Frame = 1
Query:    1 TGXATETSPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPLGRFAVRDVRQTVAVGVIKSVE 180
            +G   E +PK +KSGDAAIV+MVP KPMCVE+F+ YPPLGRFAVRD+RQTVAVGVIK+VE
Sbjct:  383 SGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVE 442          
BLAST of GR312986 vs. ExPASy Swiss-Prot
Match: EF1A4_OSCTI (Elongation factor 1-alpha 4 OS=Oscheius tipulae GN=eft-4 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.144e-19
Identity = 44/59 (74.58%), Postives = 51/59 (86.44%), Query Frame = 1
Query:    1 TGXATETSPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPLGRFAVRDVRQTVAVGVIKSV 177
            TG   E  PKF+KSGDA IV+++P+KP+CVEAFTDY PLGRFAVRD+RQTVAVGVIK V
Sbjct:  383 TGKKVEDLPKFLKSGDAGIVELIPTKPLCVEAFTDYAPLGRFAVRDMRQTVAVGVIKGV 441          
BLAST of GR312986 vs. ExPASy Swiss-Prot
Match: EF1A1_OSCTI (Elongation factor 1-alpha 1 OS=Oscheius tipulae GN=eft-1 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.144e-19
Identity = 44/59 (74.58%), Postives = 51/59 (86.44%), Query Frame = 1
Query:    1 TGXATETSPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPLGRFAVRDVRQTVAVGVIKSV 177
            TG   E  PKF+KSGDA IV+++P+KP+CVEAFTDY PLGRFAVRD+RQTVAVGVIK V
Sbjct:  383 TGKKVEDLPKFLKSGDAGIVELIPTKPLCVEAFTDYAPLGRFAVRDMRQTVAVGVIKGV 441          
BLAST of GR312986 vs. ExPASy Swiss-Prot
Match: EF1A_STYLE (Elongation factor 1-alpha OS=Stylonychia lemnae GN=EFAA PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.493e-19
Identity = 44/59 (74.58%), Postives = 50/59 (84.75%), Query Frame = 1
Query:    1 TGXATETSPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPLGRFAVRDVRQTVAVGVIKSV 177
            +G   E  PKFIKSG+AA+V+MVP KPMCVEAF  YPPLGRFAVRD++QTVAVGVIK V
Sbjct:  371 SGKVLEEEPKFIKSGEAALVRMVPQKPMCVEAFNQYPPLGRFAVRDMKQTVAVGVIKEV 429          
The following BLAST results are available for this feature:
BLAST of GR312986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135
Match NameE-valueIdentityDescription
EF1A_APIME8.756e-2077.97Elongation factor 1-alpha OS=Apis mellifera PE=3 S... [more]
EF1A2_RAT8.756e-2075.00Elongation factor 1-alpha 2 OS=Rattus norvegicus G... [more]
EF1A2_RABIT8.756e-2075.00Elongation factor 1-alpha 2 OS=Oryctolagus cunicul... [more]
EF1A2_OSCTI8.756e-2074.58Elongation factor 1-alpha 2 OS=Oscheius tipulae GN... [more]
EF1A2_MOUSE8.756e-2075.00Elongation factor 1-alpha 2 OS=Mus musculus GN=Eef... [more]
EF1A2_HUMAN8.756e-2075.00Elongation factor 1-alpha 2 OS=Homo sapiens GN=EEF... [more]
EF1A2_BOVIN8.756e-2075.00Elongation factor 1-alpha 2 OS=Bos taurus GN=EEF1A... [more]
EF1A4_OSCTI1.144e-1974.58Elongation factor 1-alpha 4 OS=Oscheius tipulae GN... [more]
EF1A1_OSCTI1.144e-1974.58Elongation factor 1-alpha 1 OS=Oscheius tipulae GN... [more]
EF1A_STYLE1.493e-1974.58Elongation factor 1-alpha OS=Stylonychia lemnae GN... [more]

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Properties
Property NameValue
Genbank descriptionC06057A12 RindPdigS Citrus sinensis cDNA clone N11D06, mRNA sequence.