GR312984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of GR312984 vs. ExPASy Swiss-Prot
Match: RK1_CYAPA (50S ribosomal protein L1, cyanelle OS=Cyanophora paradoxa GN=rpl1 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 7.543e-35 Identity = 68/105 (64.76%), Postives = 87/105 (82.86%), Query Frame = 1 Query: 4 KFTEIAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVEVAVLAQGEKFDEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPK 318 KF E E H RL IDPKYNDQQLRATV+LP GTG+++ VAV+ +GEK +EA AGADLVG ++LI++I+ G ++FD LIA+PDMM +VA LG++LGPRGLMP+PK Sbjct: 36 KFIETVEVHCRLGIDPKYNDQQLRATVTLPNGTGQTLRVAVITRGEKINEASTAGADLVGAEELIDEIQNGRLDFDCLIATPDMMPQVAKLGRVLGPRGLMPSPK 140
BLAST of GR312984 vs. ExPASy Swiss-Prot
Match: RL1_SYNJB (50S ribosomal protein L1 OS=Synechococcus sp. GN=rplA PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 1.680e-34 Identity = 70/105 (66.67%), Postives = 85/105 (80.95%), Query Frame = 1 Query: 4 KFTEIAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVEVAVLAQGEKFDEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPK 318 KF E AE H RL IDPKY DQQLR TV LP+GTG+ + VAV+A+GEK EA+NAGAD VG +DLIE+I G M+FD LIA+PD+M +VA LG++LGPRGLMP+PK Sbjct: 37 KFEEAAEVHIRLGIDPKYADQQLRTTVVLPRGTGQEIRVAVIARGEKVVEAQNAGADRVGYEDLIEEISKGMMDFDLLIATPDVMPQVAKLGRLLGPRGLMPSPK 141
BLAST of GR312984 vs. ExPASy Swiss-Prot
Match: RK1_RHDSA (50S ribosomal protein L1, chloroplastic OS=Rhodomonas salina GN=rpl1 PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 1.680e-34 Identity = 70/106 (66.04%), Postives = 84/106 (79.25%), Query Frame = 1 Query: 4 KFTEIAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVEVAVLAQGEKFDEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKA 321 KFTE AEAH L ID KY DQQLR T+ LPKGTGK V +AV+AQGEK +EA AGADL G +DLI+ I G ++FD+LIA+PDMM +A LGK+LGPRGLMP+PK+ Sbjct: 36 KFTETAEAHISLKIDTKYADQQLRTTLVLPKGTGKKVRIAVVAQGEKINEALAAGADLAGAEDLIQNIMKGDLDFDRLIATPDMMPAIAKLGKVLGPRGLMPSPKS 141
BLAST of GR312984 vs. ExPASy Swiss-Prot
Match: RL1_PROMT (50S ribosomal protein L1 OS=Prochlorococcus marinus (strain NATL2A) GN=rplA PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.195e-34 Identity = 68/106 (64.15%), Postives = 82/106 (77.36%), Query Frame = 1 Query: 4 KFTEIAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVEVAVLAQGEKFDEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKA 321 KF E EAH RL IDPKY DQQLR TV+LP GTG+ + +AV+ +GEK +EA AGADL G +DL++ I G M FD LI++PDMM KVA LG++LGPRGLMPNPKA Sbjct: 36 KFDETIEAHIRLGIDPKYTDQQLRTTVALPSGTGQKIRIAVVTRGEKVNEATKAGADLAGEEDLVDSINKGEMNFDLLISTPDMMPKVAKLGRVLGPRGLMPNPKA 141
BLAST of GR312984 vs. ExPASy Swiss-Prot
Match: RL1_PROM4 (50S ribosomal protein L1 OS=Prochlorococcus marinus (strain MIT 9211) GN=rplA PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.195e-34 Identity = 68/105 (64.76%), Postives = 84/105 (80.00%), Query Frame = 1 Query: 4 KFTEIAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVEVAVLAQGEKFDEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPK 318 KF E EAH RL IDPKY DQQ+R TV+LP GTG+++ +AV+A+GEK EAK+AGADL G ++L++ I G M FD LIA+PDMM KVA LG++LGPRGLMPNPK Sbjct: 36 KFDETIEAHVRLGIDPKYTDQQIRTTVTLPNGTGQTIRIAVIARGEKVAEAKSAGADLAGEEELVDSISKGEMGFDLLIATPDMMPKVAKLGRVLGPRGLMPNPK 140
BLAST of GR312984 vs. ExPASy Swiss-Prot
Match: RL1_PROM1 (50S ribosomal protein L1 OS=Prochlorococcus marinus (strain NATL1A) GN=rplA PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.195e-34 Identity = 68/106 (64.15%), Postives = 82/106 (77.36%), Query Frame = 1 Query: 4 KFTEIAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVEVAVLAQGEKFDEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKA 321 KF E EAH RL IDPKY DQQLR TV+LP GTG+ + +AV+ +GEK +EA AGADL G +DL++ I G M FD LI++PDMM KVA LG++LGPRGLMPNPKA Sbjct: 36 KFDETIEAHIRLGIDPKYTDQQLRTTVALPSGTGQKIRIAVVTRGEKVNEATKAGADLAGEEDLVDSINKGEMNFDLLISTPDMMPKVAKLGRVLGPRGLMPNPKA 141
BLAST of GR312984 vs. ExPASy Swiss-Prot
Match: RK1_PORPU (50S ribosomal protein L1, chloroplastic OS=Porphyra purpurea GN=rpl1 PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.195e-34 Identity = 69/106 (65.09%), Postives = 87/106 (82.08%), Query Frame = 1 Query: 4 KFTEIAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVEVAVLAQGEKFDEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKA 321 KF E AEAH L ++PKY DQQLRATV LPKGTGK V+VAV+A+GEK EA NAGAD+ G ++LI++I G ++FDKLIA+PD+M +A LG++LGPRGLMP+PKA Sbjct: 36 KFKETAEAHISLGLNPKYADQQLRATVILPKGTGKLVKVAVIAKGEKLTEAMNAGADISGSEELIDEISKGRLDFDKLIATPDIMPLIAKLGRVLGPRGLMPSPKA 141
BLAST of GR312984 vs. ExPASy Swiss-Prot
Match: RL1_SYNS9 (50S ribosomal protein L1 OS=Synechococcus sp. (strain CC9902) GN=rplA PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 4.889e-34 Identity = 70/106 (66.04%), Postives = 81/106 (76.42%), Query Frame = 1 Query: 4 KFTEIAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVEVAVLAQGEKFDEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKA 321 KF E EAH RL IDPKY DQQLR TV+LP GTG++V +AV+ GEK AK AGA+L G +DL+E I G M FD LIA+PDMM KVA LG++LGPRGLMPNPKA Sbjct: 36 KFDETMEAHVRLGIDPKYTDQQLRTTVALPNGTGQTVRIAVVTSGEKVAAAKAAGAELAGDEDLVEAISKGEMNFDLLIATPDMMPKVAKLGRVLGPRGLMPNPKA 141
BLAST of GR312984 vs. ExPASy Swiss-Prot
Match: RL1_SYNJA (50S ribosomal protein L1 OS=Synechococcus sp. (strain JA-3-3Ab) GN=rplA PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 6.386e-34 Identity = 69/105 (65.71%), Postives = 85/105 (80.95%), Query Frame = 1 Query: 4 KFTEIAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVEVAVLAQGEKFDEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPK 318 KF E AE H RL IDPKY DQQLR TV LP+GTG+ + VAV+A+GEK EA+NAGAD VG +DLIE+I G ++FD LIA+PD+M +VA LG++LGPRGLMP+PK Sbjct: 37 KFDEAAEVHIRLGIDPKYADQQLRTTVVLPRGTGQEIRVAVIARGEKVTEAQNAGADRVGFEDLIEEIGKGVIDFDLLIATPDVMPQVAKLGRLLGPRGLMPSPK 141
BLAST of GR312984 vs. ExPASy Swiss-Prot
Match: RL1_SYNP2 (50S ribosomal protein L1 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=rplA PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 1.423e-33 Identity = 69/105 (65.71%), Postives = 83/105 (79.05%), Query Frame = 1 Query: 4 KFTEIAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVEVAVLAQGEKFDEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPK 318 KF E AEAH RL IDPKY DQQLR TV+ PKGTG+SV VAV+ GE+ A+ +GADLVG ++LIE I+ G M+F+ LIA+PDMM KVA LG+ LGPRGLMP+PK Sbjct: 37 KFDETAEAHIRLGIDPKYTDQQLRTTVAFPKGTGQSVRVAVITSGEQVKVAEESGADLVGSEELIEDIQKGMMDFEVLIATPDMMPKVARLGRQLGPRGLMPSPK 141 The following BLAST results are available for this feature:
BLAST of GR312984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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