GR312984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of GR312984 vs. ExPASy Swiss-Prot
Match: RL1_DESAD (50S ribosomal protein L1 OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=rplA PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 1.472e-30 Identity = 59/105 (56.19%), Postives = 75/105 (71.43%), Query Frame = 1 Query: 4 KFTEIAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVEVAVLAQGEKFDEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPK 318 KF E + L +DPKY+DQ +R V+LP G GK + VA GEK EAK AGAD VGGDDL+ ++K G+++FDK IA+PDMM KV +G++LGPRGLMPN K Sbjct: 36 KFDETVDVAINLGVDPKYSDQMIRGAVTLPNGLGKEIRVACFVSGEKEAEAKEAGADFVGGDDLVAKVKDGWLDFDKAIATPDMMAKVGQIGRVLGPRGLMPNAK 140
BLAST of GR312984 vs. ExPASy Swiss-Prot
Match: RL1_RHILW (50S ribosomal protein L1 OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=rplA PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.923e-30 Identity = 61/105 (58.10%), Postives = 79/105 (75.24%), Query Frame = 1 Query: 4 KFTEIAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVEVAVLAQGEKFDEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPK 318 KF E E L +DP++ DQ +R V+LP GTG++V VAV A+G K DEAK AGAD+VG +DL+E ++GG +EFD+ IA+PDMM V LGK+LGPRG+MPNPK Sbjct: 35 KFDETIEVSMNLGVDPRHADQMVRGVVNLPNGTGRTVRVAVFARGVKADEAKAAGADIVGAEDLVEIVQGGKIEFDRCIATPDMMPLVGRLGKVLGPRGMMPNPK 139
BLAST of GR312984 vs. ExPASy Swiss-Prot
Match: RL1_RHIEC (50S ribosomal protein L1 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=rplA PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.923e-30 Identity = 61/105 (58.10%), Postives = 79/105 (75.24%), Query Frame = 1 Query: 4 KFTEIAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVEVAVLAQGEKFDEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPK 318 KF E E L +DP++ DQ +R V+LP GTG++V VAV A+G K DEAK AGAD+VG +DL+E ++GG +EFD+ IA+PDMM V LGK+LGPRG+MPNPK Sbjct: 35 KFDETIEVSMNLGVDPRHADQMVRGVVNLPNGTGRTVRVAVFARGAKADEAKAAGADVVGAEDLVEIVQGGKIEFDRCIATPDMMPLVGRLGKVLGPRGMMPNPK 139
BLAST of GR312984 vs. ExPASy Swiss-Prot
Match: RL1_RHIE6 (50S ribosomal protein L1 OS=Rhizobium etli (strain CIAT 652) GN=rplA PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.923e-30 Identity = 61/105 (58.10%), Postives = 79/105 (75.24%), Query Frame = 1 Query: 4 KFTEIAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVEVAVLAQGEKFDEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPK 318 KF E E L +DP++ DQ +R V+LP GTG++V VAV A+G K DEAK AGAD+VG +DL+E ++GG +EFD+ IA+PDMM V LGK+LGPRG+MPNPK Sbjct: 35 KFDETIEVSMNLGVDPRHADQMVRGVVNLPNGTGRTVRVAVFARGAKADEAKAAGADVVGAEDLVEIVQGGKIEFDRCIATPDMMPLVGRLGKVLGPRGMMPNPK 139
BLAST of GR312984 vs. ExPASy Swiss-Prot
Match: RL1_KOSOT (50S ribosomal protein L1 OS=Kosmotoga olearia (strain TBF 19.5.1) GN=rplA PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.923e-30 Identity = 62/106 (58.49%), Postives = 81/106 (76.42%), Query Frame = 1 Query: 4 KFTEIAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVEVAVLAQGEKFDEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKA 321 KF E E H + I+P +DQQ+R T+SLP GTGK+V+V V +GEK +EAK AGAD VG D+LI+QI+ G+ +FD IA+PDMM ++ LG+ILGPRGLMP+PKA Sbjct: 37 KFDESIELHIKTGIEPSKSDQQVRGTISLPHGTGKNVKVLVFTRGEKVEEAKAAGADFVGSDELIQQIQKGWTDFDVAIATPDMMREIGRLGRILGPRGLMPSPKA 142
BLAST of GR312984 vs. ExPASy Swiss-Prot
Match: RL1_JANSC (50S ribosomal protein L1 OS=Jannaschia sp. (strain CCS1) GN=rplA PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.923e-30 Identity = 62/106 (58.49%), Postives = 80/106 (75.47%), Query Frame = 1 Query: 1 TKFTEIAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVEVAVLAQGEKFDEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPK 318 TKF E E +L +DP++ DQ +R TV+LP GTGK+V VAV A+G K +EA AGAD+VG +DL+E ++GG +EFD+ IA+PDMM V LGK+LGPR LMPNPK Sbjct: 36 TKFDETIEIAMKLGVDPRHADQMVRGTVNLPNGTGKTVRVAVFARGPKAEEATAAGADIVGAEDLMETVQGGTIEFDRCIATPDMMPIVGRLGKVLGPRNLMPNPK 141
BLAST of GR312984 vs. ExPASy Swiss-Prot
Match: RL1_CHLCV (50S ribosomal protein L1 OS=Chlamydophila caviae GN=rplA PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.923e-30 Identity = 60/106 (56.60%), Postives = 81/106 (76.42%), Query Frame = 1 Query: 4 KFTEIAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVEVAVLAQGEKFDEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKA 321 +F + + +L IDPK +DQQ+R +VSLP GTGK++++ V A GEK EA +AGAD VG DDL+E+IKGG+++FD +A+PDMM +V LGK+LGPR LMP PKA Sbjct: 37 RFDQTVDVSIKLGIDPKKSDQQIRGSVSLPNGTGKTLKILVFAAGEKAKEALDAGADFVGSDDLVERIKGGWVDFDVAVATPDMMREVGKLGKVLGPRNLMPTPKA 142
BLAST of GR312984 vs. ExPASy Swiss-Prot
Match: RL1_RHISN (50S ribosomal protein L1 OS=Rhizobium sp. (strain NGR234) GN=rplA PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 2.511e-30 Identity = 61/105 (58.10%), Postives = 79/105 (75.24%), Query Frame = 1 Query: 4 KFTEIAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVEVAVLAQGEKFDEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPK 318 KF E E L +DP++ DQ +R V+LP GTG+SV VAV A+G K DEAK AGAD+VG +DL+E ++GG ++FD+ IA+PDMM V LGK+LGPRG+MPNPK Sbjct: 37 KFDETIEVAMNLGVDPRHADQMVRGVVNLPNGTGRSVRVAVFARGAKADEAKAAGADVVGAEDLVEIVQGGKIDFDRCIATPDMMPLVGRLGKVLGPRGMMPNPK 141
BLAST of GR312984 vs. ExPASy Swiss-Prot
Match: RL1_DEIGD (50S ribosomal protein L1 OS=Deinococcus geothermalis (strain DSM 11300) GN=rplA PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 2.511e-30 Identity = 60/107 (56.07%), Postives = 83/107 (77.57%), Query Frame = 1 Query: 4 KFTEIAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVEVAVLAQGEKFDEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVA-SLGKILGPRGLMPNPKA 321 KF E E HFRL IDP+ +DQ +R TV+LP GTGK+V VAV+ +G+ A+ AGAD+VGG+DLI++I GFM+FD ++A+PDMM ++ L ++LGPRGL+PNPK+ Sbjct: 37 KFDETVEVHFRLGIDPRKSDQNVRGTVALPHGTGKTVRVAVITKGDNVAAAEAAGADVVGGEDLIDRIANGFMDFDAVVATPDMMAQIGQKLARLLGPRGLLPNPKS 143
BLAST of GR312984 vs. ExPASy Swiss-Prot
Match: RL1_CHLFF (50S ribosomal protein L1 OS=Chlamydophila felis (strain Fe/C-56) GN=rplA PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 2.511e-30 Identity = 60/106 (56.60%), Postives = 80/106 (75.47%), Query Frame = 1 Query: 4 KFTEIAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVEVAVLAQGEKFDEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKA 321 +F + + +L IDPK +DQQ+R +VSLP GTGK++ + V A GEK EA +AGAD VG DDL+E+IKGG+++FD +A+PDMM +V LGK+LGPR LMP PKA Sbjct: 37 RFDQTVDVSIKLGIDPKKSDQQIRGSVSLPNGTGKTLRILVFAAGEKAKEALDAGADFVGSDDLVEKIKGGWVDFDVAVATPDMMREVGKLGKVLGPRNLMPTPKA 142 The following BLAST results are available for this feature:
BLAST of GR312984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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