GR312957

Overview
NameGR312957
Unique NameGR312957
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAOX_HUMAN (NADP-dependent malic enzyme OS=Homo sapiens GN=ME1 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.988e-21
Identity = 50/76 (65.79%), Postives = 53/76 (69.74%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            T NE+LLKD  YIGLRQRR  G EY + LDEFM AV   YG   LIQFEDFAN NAF LL KY   +  FNDDIQG
Sbjct:  197 TENEELLKDPLYIGLRQRRVRGSEYDDFLDEFMEAVSSKYGMNCLIQFEDFANVNAFRLLNKYRNQYCTFNDDIQG 272          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAON_MOUSE (NADP-dependent malic enzyme, mitochondrial OS=Mus musculus GN=Me3 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.937e-20
Identity = 47/76 (61.84%), Postives = 56/76 (73.68%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            TNNE+LL+D  YIGL+ +R  G+EY +LLDEFM AV   +G   LIQFEDFAN NAF LL KY   + +FNDDIQG
Sbjct:  232 TNNEELLRDPLYIGLKHQRVRGEEYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFNDDIQG 307          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAOX_COLLI (NADP-dependent malic enzyme OS=Columba livia GN=ME1 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.530e-20
Identity = 49/76 (64.47%), Postives = 53/76 (69.74%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            T+NE LLKD  YIGLR +R  GQ Y +LLDEFM AV   YG   LIQFEDFAN NAF LL KY   +  FNDDIQG
Sbjct:  186 TDNETLLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYGMNCLIQFEDFANANAFRLLHKYRNKYCTFNDDIQG 261          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAOX_ANAPL (NADP-dependent malic enzyme OS=Anas platyrhynchos GN=ME1 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.530e-20
Identity = 49/76 (64.47%), Postives = 53/76 (69.74%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            T+NE LLKD  YIGLR +R  GQ Y +LLDEFM AV   YG   LIQFEDFAN NAF LL KY   +  FNDDIQG
Sbjct:  186 TDNEALLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYGMNCLIQFEDFANANAFRLLHKYRNKYCTFNDDIQG 261          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAOX_MOUSE (NADP-dependent malic enzyme OS=Mus musculus GN=Me1 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.315e-20
Identity = 48/76 (63.16%), Postives = 50/76 (65.79%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            T NE+LLKD  YIGLR RR  G EY   LDEFM A    YG   LIQFEDFAN NAF LL KY   +  FNDDIQG
Sbjct:  197 TENEELLKDPLYIGLRHRRVRGPEYDAFLDEFMEAASSKYGMNCLIQFEDFANRNAFRLLNKYRNKYCTFNDDIQG 272          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAOM_ASCSU (NAD-dependent malic enzyme, mitochondrial (Fragment) OS=Ascaris suum PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.315e-20
Identity = 47/76 (61.84%), Postives = 54/76 (71.05%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            TNN  LL D FYIGLR +R  G++Y  LLD FM A  + YG+K LIQFEDFAN NAF LL KY   + +FNDDIQG
Sbjct:  261 TNNMDLLNDPFYIGLRHKRVRGKDYDTLLDNFMKACTKKYGQKTLIQFEDFANPNAFRLLDKYQDKYTMFNDDIQG 336          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: AB34G_ARATH (ABC transporter G family member 34 OS=Arabidopsis thaliana GN=ABCG34 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 7.361e-20
Identity = 42/82 (51.22%), Postives = 60/82 (73.17%), Query Frame = -2
Query:  353 YWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 598
            YW SPVAW LYG++T QVGD +S+V I    +  M++K  +++ + F  DF+PVV+++HI W+ +FLF FAY IK +NFQRR
Sbjct: 1374 YWASPVAWTLYGIITSQVGDRDSIVHITGVGD--MSLKTLLKNGFGFDYDFLPVVAVVHIAWILIFLFAFAYGIKFLNFQRR 1453          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAOX_RAT (NADP-dependent malic enzyme OS=Rattus norvegicus GN=Me1 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 9.614e-20
Identity = 48/76 (63.16%), Postives = 50/76 (65.79%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            T NE+LLKD  YIGLR RR  G EY   LDEFM A    YG   LIQFEDFAN NAF LL KY   +  FNDDIQG
Sbjct:  197 TENEELLKDPLYIGLRHRRVRGPEYDAFLDEFMEAASSKYGMNCLIQFEDFANLNAFRLLNKYRNKYCTFNDDIQG 272          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: AB39G_ARATH (ABC transporter G family member 39 OS=Arabidopsis thaliana GN=ABCG39 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.256e-19
Identity = 42/82 (51.22%), Postives = 61/82 (74.39%), Query Frame = -2
Query:  353 YWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 598
            YW +PVAW LYGL+T QVGD +S+V I    +  + +K  +++ + F+ DF+PVV+++HI W+ +FLFVFAY IK +NFQRR
Sbjct: 1375 YWATPVAWTLYGLITSQVGDKDSMVHISGIGD--IDLKTLLKEGFGFEHDFLPVVAVVHIAWILLFLFVFAYGIKFLNFQRR 1454          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAON_HUMAN (NADP-dependent malic enzyme, mitochondrial OS=Homo sapiens GN=ME3 PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 1.640e-19
Identity = 46/76 (60.53%), Postives = 55/76 (72.37%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            TNNE+LL+D  YIGL+ +R  G+ Y +LLDEFM AV   +G   LIQFEDFAN NAF LL KY   + +FNDDIQG
Sbjct:  232 TNNEELLRDPLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFNDDIQG 307          
The following BLAST results are available for this feature:
BLAST of GR312957 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 151
Match NameE-valueIdentityDescription
MAOX_HUMAN2.988e-2165.79NADP-dependent malic enzyme OS=Homo sapiens GN=ME1... [more]
MAON_MOUSE1.937e-2061.84NADP-dependent malic enzyme, mitochondrial OS=Mus ... [more]
MAOX_COLLI2.530e-2064.47NADP-dependent malic enzyme OS=Columba livia GN=ME... [more]
MAOX_ANAPL2.530e-2064.47NADP-dependent malic enzyme OS=Anas platyrhynchos ... [more]
MAOX_MOUSE4.315e-2063.16NADP-dependent malic enzyme OS=Mus musculus GN=Me1... [more]
MAOM_ASCSU4.315e-2061.84NAD-dependent malic enzyme, mitochondrial (Fragmen... [more]
AB34G_ARATH7.361e-2051.22ABC transporter G family member 34 OS=Arabidopsis ... [more]
MAOX_RAT9.614e-2063.16NADP-dependent malic enzyme OS=Rattus norvegicus G... [more]
AB39G_ARATH1.256e-1951.22ABC transporter G family member 39 OS=Arabidopsis ... [more]
MAON_HUMAN1.640e-1960.53NADP-dependent malic enzyme, mitochondrial OS=Homo... [more]

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Properties
Property NameValue
Genbank descriptionC06054C09 RindPdigS Citrus sinensis cDNA clone N10A03, mRNA sequence.