GR312957

Overview
NameGR312957
Unique NameGR312957
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAO1_ESCF3 (NAD-dependent malic enzyme OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=sfcA PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.130e-15
Identity = 42/76 (55.26%), Postives = 50/76 (65.79%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            TNN+QLL D  Y+G R  R T  EY E +DEF+ AVKQ + + VL+QFEDFA  NA  LL +Y      FNDDIQG
Sbjct:  199 TNNQQLLNDPLYMGWRNPRITDDEYYEFVDEFIQAVKQRWPD-VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQG 273          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAO1_ECOUT (NAD-dependent malic enzyme OS=Escherichia coli (strain UTI89 / UPEC) GN=sfcA PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 7.130e-15
Identity = 42/76 (55.26%), Postives = 50/76 (65.79%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            TNN+QLL D  Y+G R  R T  EY E +DEF+ AVKQ + + VL+QFEDFA  NA  LL +Y      FNDDIQG
Sbjct:  199 TNNQQLLNDPLYMGWRNPRITDDEYYEFVDEFIQAVKQRWPD-VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQG 273          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAO1_ECOSM (NAD-dependent malic enzyme OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.130e-15
Identity = 42/76 (55.26%), Postives = 50/76 (65.79%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            TNN+QLL D  Y+G R  R T  EY E +DEF+ AVKQ + + VL+QFEDFA  NA  LL +Y      FNDDIQG
Sbjct:  199 TNNQQLLNDPLYMGWRNPRITDDEYYEFVDEFIQAVKQRWPD-VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQG 273          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAO1_ECOLU (NAD-dependent malic enzyme OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.130e-15
Identity = 42/76 (55.26%), Postives = 50/76 (65.79%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            TNN+QLL D  Y+G R  R T  EY E +DEF+ AVKQ + + VL+QFEDFA  NA  LL +Y      FNDDIQG
Sbjct:  199 TNNQQLLNDPLYMGWRNPRITDDEYYEFVDEFIQAVKQRWPD-VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQG 273          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAO1_ECOLI (NAD-dependent malic enzyme OS=Escherichia coli (strain K12) GN=sfcA PE=3 SV=4)

HSP 1 Score: 80.4925 bits (197), Expect = 7.130e-15
Identity = 42/76 (55.26%), Postives = 50/76 (65.79%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            TNN+QLL D  Y+G R  R T  EY E +DEF+ AVKQ + + VL+QFEDFA  NA  LL +Y      FNDDIQG
Sbjct:  199 TNNQQLLNDPLYMGWRNPRITDDEYYEFVDEFIQAVKQRWPD-VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQG 273          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAO1_ECOLC (NAD-dependent malic enzyme OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=sfcA PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.130e-15
Identity = 42/76 (55.26%), Postives = 50/76 (65.79%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            TNN+QLL D  Y+G R  R T  EY E +DEF+ AVKQ + + VL+QFEDFA  NA  LL +Y      FNDDIQG
Sbjct:  199 TNNQQLLNDPLYMGWRNPRITDDEYYEFVDEFIQAVKQRWPD-VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQG 273          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAO1_ECOL6 (NAD-dependent malic enzyme OS=Escherichia coli O6 GN=sfcA PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 7.130e-15
Identity = 42/76 (55.26%), Postives = 50/76 (65.79%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            TNN+QLL D  Y+G R  R T  EY E +DEF+ AVKQ + + VL+QFEDFA  NA  LL +Y      FNDDIQG
Sbjct:  199 TNNQQLLNDPLYMGWRNPRITDDEYYEFVDEFIQAVKQRWPD-VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQG 273          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAO1_ECOL5 (NAD-dependent malic enzyme OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.130e-15
Identity = 42/76 (55.26%), Postives = 50/76 (65.79%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            TNN+QLL D  Y+G R  R T  EY E +DEF+ AVKQ + + VL+QFEDFA  NA  LL +Y      FNDDIQG
Sbjct:  199 TNNQQLLNDPLYMGWRNPRITDDEYYEFVDEFIQAVKQRWPD-VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQG 273          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAO1_ECOK1 (NAD-dependent malic enzyme OS=Escherichia coli O1:K1 / APEC GN=sfcA PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 7.130e-15
Identity = 42/76 (55.26%), Postives = 50/76 (65.79%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            TNN+QLL D  Y+G R  R T  EY E +DEF+ AVKQ + + VL+QFEDFA  NA  LL +Y      FNDDIQG
Sbjct:  199 TNNQQLLNDPLYMGWRNPRITDDEYYEFVDEFIQAVKQRWPD-VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQG 273          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAO1_ECOHS (NAD-dependent malic enzyme OS=Escherichia coli O9:H4 (strain HS) GN=sfcA PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.130e-15
Identity = 42/76 (55.26%), Postives = 50/76 (65.79%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            TNN+QLL D  Y+G R  R T  EY E +DEF+ AVKQ + + VL+QFEDFA  NA  LL +Y      FNDDIQG
Sbjct:  199 TNNQQLLNDPLYMGWRNPRITDDEYYEFVDEFIQAVKQRWPD-VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQG 273          
The following BLAST results are available for this feature:
BLAST of GR312957 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 151
Match NameE-valueIdentityDescription
MAO1_ESCF37.130e-1555.26NAD-dependent malic enzyme OS=Escherichia ferguson... [more]
MAO1_ECOUT7.130e-1555.26NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECOSM7.130e-1555.26NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECOLU7.130e-1555.26NAD-dependent malic enzyme OS=Escherichia coli O17... [more]
MAO1_ECOLI7.130e-1555.26NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECOLC7.130e-1555.26NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECOL67.130e-1555.26NAD-dependent malic enzyme OS=Escherichia coli O6 ... [more]
MAO1_ECOL57.130e-1555.26NAD-dependent malic enzyme OS=Escherichia coli O6:... [more]
MAO1_ECOK17.130e-1555.26NAD-dependent malic enzyme OS=Escherichia coli O1:... [more]
MAO1_ECOHS7.130e-1555.26NAD-dependent malic enzyme OS=Escherichia coli O9:... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC06054C09 RindPdigS Citrus sinensis cDNA clone N10A03, mRNA sequence.