GR312957

Overview
NameGR312957
Unique NameGR312957
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: AB35G_ARATH (ABC transporter G family member 35 OS=Arabidopsis thaliana GN=ABCG35 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.709e-14
Identity = 35/82 (42.68%), Postives = 55/82 (67.07%), Query Frame = -2
Query:  353 YWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 598
            YW+ PVAW +YGL+T Q GD+E+ + +  G    +TVKQ+I+D Y F+ D++  V+ + + +   F F+FA+ IK +NFQ R
Sbjct: 1362 YWICPVAWTIYGLITSQYGDVETPIALL-GGAPGLTVKQYIKDQYGFESDYMGPVAGVLVGFTVFFAFIFAFCIKTLNFQSR 1442          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAO1_SHIBS (NAD-dependent malic enzyme OS=Shigella boydii serotype 4 (strain Sb227) GN=sfcA PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 3.538e-14
Identity = 41/76 (53.95%), Postives = 49/76 (64.47%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            TNN+QLL D  Y+G R  R    EY E +DEF+ AVKQ + + VL+QFEDFA  NA  LL +Y      FNDDIQG
Sbjct:  199 TNNQQLLNDPLYMGWRNPRIIDDEYYEFVDEFIQAVKQRWPD-VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQG 273          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAO1_SHIB3 (NAD-dependent malic enzyme OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=sfcA PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.538e-14
Identity = 41/76 (53.95%), Postives = 49/76 (64.47%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            TNN+QLL D  Y+G R  R    EY E +DEF+ AVKQ + + VL+QFEDFA  NA  LL +Y      FNDDIQG
Sbjct:  199 TNNQQLLNDPLYMGWRNPRIIDDEYYEFVDEFIQAVKQRWPD-VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQG 273          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAO1_SALTY (NAD-dependent malic enzyme OS=Salmonella typhimurium GN=sfcA PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.538e-14
Identity = 40/76 (52.63%), Postives = 49/76 (64.47%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            TNN+QLL D  Y+G R  R T  EY   +DEF+ AVKQ + + +L+QFEDFA  NA  LL +Y      FNDDIQG
Sbjct:  199 TNNQQLLNDPLYMGWRHPRITDDEYYAFVDEFIQAVKQRWPD-ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQG 273          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAO1_SALTI (NAD-dependent malic enzyme OS=Salmonella typhi GN=sfcA PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 3.538e-14
Identity = 40/76 (52.63%), Postives = 49/76 (64.47%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            TNN+QLL D  Y+G R  R T  EY   +DEF+ AVKQ + + +L+QFEDFA  NA  LL +Y      FNDDIQG
Sbjct:  199 TNNQQLLNDPLYMGWRHPRITDDEYYAFVDEFIQAVKQRWPD-ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQG 273          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAO1_SALSV (NAD-dependent malic enzyme OS=Salmonella schwarzengrund (strain CVM19633) GN=sfcA PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.538e-14
Identity = 40/76 (52.63%), Postives = 49/76 (64.47%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            TNN+QLL D  Y+G R  R T  EY   +DEF+ AVKQ + + +L+QFEDFA  NA  LL +Y      FNDDIQG
Sbjct:  199 TNNQQLLNDPLYMGWRHPRITDDEYYAFVDEFIQAVKQRWPD-ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQG 273          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAO1_SALPB (NAD-dependent malic enzyme OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=sfcA PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.538e-14
Identity = 40/76 (52.63%), Postives = 49/76 (64.47%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            TNN+QLL D  Y+G R  R T  EY   +DEF+ AVKQ + + +L+QFEDFA  NA  LL +Y      FNDDIQG
Sbjct:  199 TNNQQLLNDPLYMGWRHPRITDDEYYAFVDEFIQAVKQRWPD-ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQG 273          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAO1_SALPA (NAD-dependent malic enzyme OS=Salmonella paratyphi A GN=sfcA PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 3.538e-14
Identity = 40/76 (52.63%), Postives = 49/76 (64.47%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            TNN+QLL D  Y+G R  R T  EY   +DEF+ AVKQ + + +L+QFEDFA  NA  LL +Y      FNDDIQG
Sbjct:  199 TNNQQLLNDPLYMGWRHPRITDDEYYAFVDEFIQAVKQRWPD-ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQG 273          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAO1_SALNS (NAD-dependent malic enzyme OS=Salmonella newport (strain SL254) GN=sfcA PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.538e-14
Identity = 40/76 (52.63%), Postives = 49/76 (64.47%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            TNN+QLL D  Y+G R  R T  EY   +DEF+ AVKQ + + +L+QFEDFA  NA  LL +Y      FNDDIQG
Sbjct:  199 TNNQQLLNDPLYMGWRHPRITDDEYYAFVDEFIQAVKQRWPD-ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQG 273          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAO1_SALHS (NAD-dependent malic enzyme OS=Salmonella heidelberg (strain SL476) GN=sfcA PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.538e-14
Identity = 40/76 (52.63%), Postives = 49/76 (64.47%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            TNN+QLL D  Y+G R  R T  EY   +DEF+ AVKQ + + +L+QFEDFA  NA  LL +Y      FNDDIQG
Sbjct:  199 TNNQQLLNDPLYMGWRHPRITDDEYYAFVDEFIQAVKQRWPD-ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQG 273          
The following BLAST results are available for this feature:
BLAST of GR312957 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 151
Match NameE-valueIdentityDescription
AB35G_ARATH2.709e-1442.68ABC transporter G family member 35 OS=Arabidopsis ... [more]
MAO1_SHIBS3.538e-1453.95NAD-dependent malic enzyme OS=Shigella boydii sero... [more]
MAO1_SHIB33.538e-1453.95NAD-dependent malic enzyme OS=Shigella boydii sero... [more]
MAO1_SALTY3.538e-1452.63NAD-dependent malic enzyme OS=Salmonella typhimuri... [more]
MAO1_SALTI3.538e-1452.63NAD-dependent malic enzyme OS=Salmonella typhi GN=... [more]
MAO1_SALSV3.538e-1452.63NAD-dependent malic enzyme OS=Salmonella schwarzen... [more]
MAO1_SALPB3.538e-1452.63NAD-dependent malic enzyme OS=Salmonella paratyphi... [more]
MAO1_SALPA3.538e-1452.63NAD-dependent malic enzyme OS=Salmonella paratyphi... [more]
MAO1_SALNS3.538e-1452.63NAD-dependent malic enzyme OS=Salmonella newport (... [more]
MAO1_SALHS3.538e-1452.63NAD-dependent malic enzyme OS=Salmonella heidelber... [more]

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Properties
Property NameValue
Genbank descriptionC06054C09 RindPdigS Citrus sinensis cDNA clone N10A03, mRNA sequence.