GO242169

Overview
NameGO242169
Unique NameGO242169
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242169 vs. ExPASy Swiss-Prot
Match: G6PD_SARBU (Glucose-6-phosphate 1-dehydrogenase (Fragment) OS=Sarcophaga bullata GN=ZW PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.972e-20
Identity = 51/137 (37.23%), Postives = 78/137 (56.93%), Query Frame = 2
Query:    2 RSKMTDAELRNMVSRTLTCRIDKRENCDEKMDEFLKRCFYHSGQYDSQENFAALDKKLMAHEGGRVSNRLFYLSIPPNIFIDAVRCASSSASSGNGWTRVIVEKPFGRDSESSAAMTKSLKQYLKEDQIFRIDHYLG 412
            RSK+T A++R    + +  ++   E   ++ +EF +   Y SG YD +  F  L +++   E   V+NR+FYL++PP++F            S  GW RVI+EKPFGRD  +S  ++  L     E+QI+RIDHYLG
Sbjct:   21 RSKLTTADIRKACEKFM--KVQPHEQ--QRYEEFWELNHYVSGSYDGRLGFEMLQQQMEIMENKGVANRVFYLALPPSVFNSVTVRIKEICLSKKGWNRVIIEKPFGRDDVTSKQLSDHLASLFDEEQIYRIDHYLG 153          
BLAST of GO242169 vs. ExPASy Swiss-Prot
Match: G6PD_BUCAP (Glucose-6-phosphate 1-dehydrogenase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=zwf PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.188e-20
Identity = 49/123 (39.84%), Postives = 72/123 (58.54%), Query Frame = 2
Query:  209 LFYLSIPPNIFIDAVRCASSSASSGNGWTRVIVEKPFGRDSESSAAMTKSLKQYLKEDQIFRIDHYLGKELVENLSVLRFSNLIFEPLWSRQYIRNVQLIFSEDFGTEGRGGYFDHYGIIRDI 577
            ++Y ++P N F +A+       +  +  +R+I+EKP G   E+S  +   + +Y  E QIFRIDHYLGKE + NL  LRFSN  F   W+ + I ++Q+  SE+ G E R  YFD  G  RD+
Sbjct:  113 IYYCAVPSNTF-NAIFTGLGKVNLNSFPSRIIIEKPLGVSLETSKKINNQIAKYFLESQIFRIDHYLGKESILNLLALRFSNSFFFHSWNNKIIDHIQITVSEEVGIENRWNYFDQMGQTRDM 234          
BLAST of GO242169 vs. ExPASy Swiss-Prot
Match: G6PD_HELPY (Glucose-6-phosphate 1-dehydrogenase OS=Helicobacter pylori GN=zwf PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.775e-20
Identity = 64/185 (34.59%), Postives = 99/185 (53.51%), Query Frame = 2
Query:   23 ELRNMVSRTLTCRIDKRENCDEKMDEFLKRCFYHSGQYDSQENFAALDKKLMAHEGGRVSNRLFYLSIPPNIFIDAVRCASSSASSGNGWTRVIVEKPFGRDSESSAAMTKSLKQYLKEDQIFRIDHYLGKELVENLSVLRFSNLIFEPLWSRQYIRNVQLIFSEDFGTEGRGGYFDHYGIIRDI 577
            EL N    TL C   +  +  EK  EFL    Y   + D+ ++F  L K    ++       +FY SI P+ F    +  + +A + +  TR+I+EKP G D ++   + +S+  + KE+QIFRIDHYLGK+ V+N+  LR +N I   LW +  I  V++   E  G E RG ++D  G +RD+
Sbjct:   46 ELSNEEFLTLLCEKTQLHS-REKGREFLAHISYLCVRLDNPKDFEELSKIATKNKP-----LIFYFSISPSFFATTAQHLAKNALN-HANTRLILEKPLGHDLKTCKEIFQSISVFFKEEQIFRIDHYLGKKGVQNILELRLNNPILNILWDQ--ISAVEICVYETLGVEERGEFYDKIGALRDM 221          
BLAST of GO242169 vs. ExPASy Swiss-Prot
Match: G6PD_HELPJ (Glucose-6-phosphate 1-dehydrogenase OS=Helicobacter pylori J99 GN=zwf PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.849e-20
Identity = 58/164 (35.37%), Postives = 92/164 (56.10%), Query Frame = 2
Query:   86 EKMDEFLKRCFYHSGQYDSQENFAALDKKLMAHEGGRVSNRLFYLSIPPNIFIDAVRCASSSASSGNGWTRVIVEKPFGRDSESSAAMTKSLKQYLKEDQIFRIDHYLGKELVENLSVLRFSNLIFEPLWSRQYIRNVQLIFSEDFGTEGRGGYFDHYGIIRDI 577
            EK +EFL    Y   + D+ ++F  L K    ++       +FY SI P+ F    +  + +A + +  TR+I+EKP G D ++   + +S+  + KE+QIFRIDHYLGK+ V+N+  LR +N I   LW +  I  V++   E  G E RG ++D  G +RD+
Sbjct:   66 EKGEEFLTHISYLRVRLDNPKDFEELSKIATNNKP-----LIFYFSISPSFFATTAQNLAQNALN-HANTRLILEKPLGHDLKTCKEIFQSISAFFKEEQIFRIDHYLGKKGVQNILELRLNNPILNILWDQ--ISAVEICVYETLGVEERGEFYDKIGALRDM 221          
BLAST of GO242169 vs. ExPASy Swiss-Prot
Match: G6PD_DROSI (Glucose-6-phosphate 1-dehydrogenase (Fragment) OS=Drosophila simulans GN=Zw PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.509e-19
Identity = 47/108 (43.52%), Postives = 66/108 (61.11%), Query Frame = 2
Query:   89 KMDEFLKRCFYHSGQYDSQENFAALDKKLMAHEGGRVSNRLFYLSIPPNIFIDAVRCASSSASSGNGWTRVIVEKPFGRDSESSAAMTKSLKQYLKEDQIFRIDHYLG 412
            K +EF     Y SG+YD + +F  L+++L   E    +NR+FYL++PP++F +          S  GW RVI+EKPFGRD  SS A++  L     EDQ++RIDHYLG
Sbjct:   46 KYEEFWALNDYVSGRYDGRTSFEVLNQRLEMMENKNKANRIFYLALPPSVFEEVTVNIKQVCMSLCGWNRVIIEKPFGRDDASSQALSDHLAGLFNEDQLYRIDHYLG 153          
BLAST of GO242169 vs. ExPASy Swiss-Prot
Match: G6PD_DICD3 (Glucose-6-phosphate 1-dehydrogenase OS=Dickeya dadantii (strain 3937) GN=zwf PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.509e-19
Identity = 49/121 (40.50%), Postives = 71/121 (58.68%), Query Frame = 2
Query:  215 YLSIPPNIFIDAVRCASSSASSGNGWTRVIVEKPFGRDSESSAAMTKSLKQYLKEDQIFRIDHYLGKELVENLSVLRFSNLIFEPLWSRQYIRNVQLIFSEDFGTEGRGGYFDHYGIIRDI 577
            Y ++PP+ F  A+      A       RV++EKP G +  SS  +   + ++  E Q++RIDHYLGKE V NL  LRF+N +F   W  + I +VQ+  +E+ G EGR GYFD  G +RD+
Sbjct:  116 YFAMPPSTF-GAICRGLGQAGLNKEPARVVMEKPLGTNLASSRVINNQVAEFFNECQVYRIDHYLGKETVLNLLALRFANSLFANNWDNRTIDHVQITVAEEVGIEGRWGYFDQAGQMRDM 235          
BLAST of GO242169 vs. ExPASy Swiss-Prot
Match: G6PD_ECOLI (Glucose-6-phosphate 1-dehydrogenase OS=Escherichia coli (strain K12) GN=zwf PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.669e-18
Identity = 48/121 (39.67%), Postives = 71/121 (58.68%), Query Frame = 2
Query:  215 YLSIPPNIFIDAVRCASSSASSGNGWTRVIVEKPFGRDSESSAAMTKSLKQYLKEDQIFRIDHYLGKELVENLSVLRFSNLIFEPLWSRQYIRNVQLIFSEDFGTEGRGGYFDHYGIIRDI 577
            Y ++PP+ F  A+      A       RV++EKP G    +S  +   + +Y +E Q++RIDHYLGKE V NL  LRF+N +F   W  + I +V++  +E+ G EGR GYFD  G +RD+
Sbjct:  116 YFAMPPSTF-GAICKGLGEAKLNAKPARVVMEKPLGTSLATSQEINDQVGEYFEECQVYRIDHYLGKETVLNLLALRFANSLFVNNWDNRTIDHVEITVAEEVGIEGRWGYFDKAGQMRDM 235          
BLAST of GO242169 vs. ExPASy Swiss-Prot
Match: G6PD_ECOL6 (Glucose-6-phosphate 1-dehydrogenase OS=Escherichia coli O6 GN=zwf PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.669e-18
Identity = 48/121 (39.67%), Postives = 71/121 (58.68%), Query Frame = 2
Query:  215 YLSIPPNIFIDAVRCASSSASSGNGWTRVIVEKPFGRDSESSAAMTKSLKQYLKEDQIFRIDHYLGKELVENLSVLRFSNLIFEPLWSRQYIRNVQLIFSEDFGTEGRGGYFDHYGIIRDI 577
            Y ++PP+ F  A+      A       RV++EKP G    +S  +   + +Y +E Q++RIDHYLGKE V NL  LRF+N +F   W  + I +V++  +E+ G EGR GYFD  G +RD+
Sbjct:  116 YFAMPPSTF-GAICKGLGEAKLNAKPARVVMEKPLGTSLATSQEINDQVGEYFEECQVYRIDHYLGKETVLNLLALRFANSLFVNNWDNRTIDHVEITVAEEVGIEGRWGYFDKAGQMRDM 235          
BLAST of GO242169 vs. ExPASy Swiss-Prot
Match: G6PD_ECO57 (Glucose-6-phosphate 1-dehydrogenase OS=Escherichia coli O157:H7 GN=zwf PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.669e-18
Identity = 48/121 (39.67%), Postives = 71/121 (58.68%), Query Frame = 2
Query:  215 YLSIPPNIFIDAVRCASSSASSGNGWTRVIVEKPFGRDSESSAAMTKSLKQYLKEDQIFRIDHYLGKELVENLSVLRFSNLIFEPLWSRQYIRNVQLIFSEDFGTEGRGGYFDHYGIIRDI 577
            Y ++PP+ F  A+      A       RV++EKP G    +S  +   + +Y +E Q++RIDHYLGKE V NL  LRF+N +F   W  + I +V++  +E+ G EGR GYFD  G +RD+
Sbjct:  116 YFAMPPSTF-GAICKGLGEAKLNAKPARVVMEKPLGTSLATSQEINDQVGEYFEECQVYRIDHYLGKETVLNLLALRFANSLFVNNWDNRTIDHVEITVAEEVGIEGRWGYFDKAGQMRDM 235          
BLAST of GO242169 vs. ExPASy Swiss-Prot
Match: G6PD_BUCAI (Glucose-6-phosphate 1-dehydrogenase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=zwf PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.480e-16
Identity = 43/123 (34.96%), Postives = 73/123 (59.35%), Query Frame = 2
Query:  209 LFYLSIPPNIFIDAVRCASSSASSGNGWTRVIVEKPFGRDSESSAAMTKSLKQYLKEDQIFRIDHYLGKELVENLSVLRFSNLIFEPLWSRQYIRNVQLIFSEDFGTEGRGGYFDHYGIIRDI 577
            ++Y ++P N  ++++     +A   +  +R+++EKP G   ++S  +   + +Y  E QIFRIDHYLGKE + NL  LRFSN      W+ + I ++Q+  SE+ G E R  YF+  G ++D+
Sbjct:  113 VYYCAVPSNT-LNSIFIGLGNAHLNSVPSRIVLEKPLGVCLKTSKKINDQISKYFLESQIFRIDHYLGKESILNLFALRFSNTCLFYNWNNKTIDHIQITVSEEVGIEDRWNYFNMMGQMKDM 234          
The following BLAST results are available for this feature:
BLAST of GO242169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
G6PD_SARBU3.972e-2037.23Glucose-6-phosphate 1-dehydrogenase (Fragment) OS=... [more]
G6PD_BUCAP5.188e-2039.84Glucose-6-phosphate 1-dehydrogenase OS=Buchnera ap... [more]
G6PD_HELPY6.775e-2034.59Glucose-6-phosphate 1-dehydrogenase OS=Helicobacte... [more]
G6PD_HELPJ8.849e-2035.37Glucose-6-phosphate 1-dehydrogenase OS=Helicobacte... [more]
G6PD_DROSI1.509e-1943.52Glucose-6-phosphate 1-dehydrogenase (Fragment) OS=... [more]
G6PD_DICD31.509e-1940.50Glucose-6-phosphate 1-dehydrogenase OS=Dickeya dad... [more]
G6PD_ECOLI1.669e-1839.67Glucose-6-phosphate 1-dehydrogenase OS=Escherichia... [more]
G6PD_ECOL61.669e-1839.67Glucose-6-phosphate 1-dehydrogenase OS=Escherichia... [more]
G6PD_ECO571.669e-1839.67Glucose-6-phosphate 1-dehydrogenase OS=Escherichia... [more]
G6PD_BUCAI3.480e-1634.96Glucose-6-phosphate 1-dehydrogenase OS=Buchnera ap... [more]

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Properties
Property NameValue
Genbank description817 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 963 5, mRNA sequence.