GO242156

Overview
NameGO242156
Unique NameGO242156
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_ACIBY (L-lactate dehydrogenase [cytochrome] OS=Acinetobacter baumannii (strain AYE) GN=lldD PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.752e-20
Identity = 48/110 (43.64%), Postives = 71/110 (64.55%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHIV 330
            A GI+VSNHG RQLD V ++  AL  +  A +G + +  D G+R G DV + LALGA  + +GR  VY+LAA G +GV  +L+++  E  +AM L+G +S+ +I  D +V
Sbjct:  267 ADGIVVSNHGGRQLDGVMSSARALPAIADAVKGDLAILADSGIRNGLDVVRMLALGADTVLLGRAFVYALAAAGGQGVSNLLDLIDKEMRVAMTLTGAKSISDINADCLV 376          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_ACIBT (L-lactate dehydrogenase [cytochrome] OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=lldD PE=3 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 2.752e-20
Identity = 48/110 (43.64%), Postives = 71/110 (64.55%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHIV 330
            A GI+VSNHG RQLD V ++  AL  +  A +G + +  D G+R G DV + LALGA  + +GR  VY+LAA G +GV  +L+++  E  +AM L+G +S+ +I  D +V
Sbjct:  267 ADGIVVSNHGGRQLDGVMSSARALPAIADAVKGDLAILADSGIRNGLDVVRMLALGADTVLLGRAFVYALAAAGGQGVSNLLDLIDKEMRVAMTLTGAKSISDINADCLV 376          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_ACIBS (L-lactate dehydrogenase [cytochrome] OS=Acinetobacter baumannii (strain SDF) GN=lldD PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.752e-20
Identity = 48/110 (43.64%), Postives = 71/110 (64.55%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHIV 330
            A GI+VSNHG RQLD V ++  AL  +  A +G + +  D G+R G DV + LALGA  + +GR  VY+LAA G +GV  +L+++  E  +AM L+G +S+ +I  D +V
Sbjct:  267 ADGIVVSNHGGRQLDGVMSSARALPAIADAVKGDLAILADSGIRNGLDVVRMLALGADTVLLGRAFVYALAAAGGQGVSNLLDLIDKEMRVAMTLTGAKSISDINTDCLV 376          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_ACIBC (L-lactate dehydrogenase [cytochrome] OS=Acinetobacter baumannii (strain ACICU) GN=lldD PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.752e-20
Identity = 48/110 (43.64%), Postives = 71/110 (64.55%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHIV 330
            A GI+VSNHG RQLD V ++  AL  +  A +G + +  D G+R G DV + LALGA  + +GR  VY+LAA G +GV  +L+++  E  +AM L+G +S+ +I  D +V
Sbjct:  267 ADGIVVSNHGGRQLDGVMSSARALPAIADAVKGDLAILADSGIRNGLDVVRMLALGADTVLLGRAFVYALAAAGGQGVSNLLDLIDKEMRVAMTLTGAKSISDINADCLV 376          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_ACIB5 (L-lactate dehydrogenase [cytochrome] OS=Acinetobacter baumannii (strain AB0057) GN=lldD PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.752e-20
Identity = 48/110 (43.64%), Postives = 71/110 (64.55%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHIV 330
            A GI+VSNHG RQLD V ++  AL  +  A +G + +  D G+R G DV + LALGA  + +GR  VY+LAA G +GV  +L+++  E  +AM L+G +S+ +I  D +V
Sbjct:  267 ADGIVVSNHGGRQLDGVMSSARALPAIADAVKGDLAILADSGIRNGLDVVRMLALGADTVLLGRAFVYALAAAGGQGVSNLLDLIDKEMRVAMTLTGAKSISDINADCLV 376          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_ACIB3 (L-lactate dehydrogenase [cytochrome] OS=Acinetobacter baumannii (strain AB307-0294) GN=lldD PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.752e-20
Identity = 48/110 (43.64%), Postives = 71/110 (64.55%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHIV 330
            A GI+VSNHG RQLD V ++  AL  +  A +G + +  D G+R G DV + LALGA  + +GR  VY+LAA G +GV  +L+++  E  +AM L+G +S+ +I  D +V
Sbjct:  267 ADGIVVSNHGGRQLDGVMSSARALPAIADAVKGDLAILADSGIRNGLDVVRMLALGADTVLLGRAFVYALAAAGGQGVSNLLDLIDKEMRVAMTLTGAKSISDINADCLV 376          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_PSEU2 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas syringae pv. syringae (strain B728a) GN=lldD PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.595e-20
Identity = 48/110 (43.64%), Postives = 71/110 (64.55%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHIV 330
            A GI+VSNHG RQLD V +T  AL  +V+A    + V  D G+R G DV + LALGA G+ +GR + Y+L A+G++GV  +L++   E  +AM L+G  S+++I    +V
Sbjct:  267 ADGIVVSNHGGRQLDGVLSTAKALPPIVQAVGSDLTVLADSGIRSGLDVVRMLALGAKGVLLGRSMAYALGADGQRGVENMLDIFAREMHVAMTLTGVTSIEQIDASILV 376          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: YKN3_SCHPO (Uncharacterized lactate 2-monooxygenase PB1A11.03 OS=Schizosaccharomyces pombe GN=SPAPB1A11.03 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.695e-20
Identity = 53/112 (47.32%), Postives = 69/112 (61.61%), Query Frame = 1
Query:    7 GIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSL--KEITRDHIVTE 336
            GI+VSNHG RQ D   A++  L ++V A   ++ V  D GVR G D+ KALALGA  + IGRP VY LA EG  GV  V+  L G+ EL + LSG  S+  K++ RD +  E
Sbjct:  295 GIVVSNHGGRQQDGGVASLTMLPKIVDAVGDKLDVLFDSGVRSGADIAKALALGAKMVLIGRPYVYGLALEGSSGVSHVIRCLLGDLELTLHLSGIVSVKPKDLNRDVLYKE 406          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_XANCP (L-lactate dehydrogenase [cytochrome] OS=Xanthomonas campestris pv. campestris GN=lldD PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.695e-20
Identity = 52/120 (43.33%), Postives = 74/120 (61.67%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHI--VTEWDASLP 354
            A GI+VSNHG RQLD V ++  AL  +  A +G + +  D G+R G DV + LALGA  + +GR  VY+LAA G+ GV  +L ++  E  +AM L+G  S+ EI+ D +  VT   A +P
Sbjct:  267 ADGIVVSNHGGRQLDGVLSSARALPAIADAVKGELKILADSGIRSGLDVVRMLALGADAVLLGRAFVYALAAGGQAGVENLLTLIEREMRVAMILTGTHSVAEISGDALSRVTREAAVVP 386          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_XANCB (L-lactate dehydrogenase [cytochrome] OS=Xanthomonas campestris pv. campestris (strain B100) GN=lldD PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.695e-20
Identity = 52/120 (43.33%), Postives = 74/120 (61.67%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHI--VTEWDASLP 354
            A GI+VSNHG RQLD V ++  AL  +  A +G + +  D G+R G DV + LALGA  + +GR  VY+LAA G+ GV  +L ++  E  +AM L+G  S+ EI+ D +  VT   A +P
Sbjct:  267 ADGIVVSNHGGRQLDGVLSSARALPAIADAVKGELKILADSGIRSGLDVVRMLALGADAVLLGRAFVYALAAGGQAGVENLLTLIEREMRVAMILTGTHSVAEISGDALSRVTREAAVVP 386          
The following BLAST results are available for this feature:
BLAST of GO242156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
LLDD_ACIBY2.752e-2043.64L-lactate dehydrogenase [cytochrome] OS=Acinetobac... [more]
LLDD_ACIBT2.752e-2043.64L-lactate dehydrogenase [cytochrome] OS=Acinetobac... [more]
LLDD_ACIBS2.752e-2043.64L-lactate dehydrogenase [cytochrome] OS=Acinetobac... [more]
LLDD_ACIBC2.752e-2043.64L-lactate dehydrogenase [cytochrome] OS=Acinetobac... [more]
LLDD_ACIB52.752e-2043.64L-lactate dehydrogenase [cytochrome] OS=Acinetobac... [more]
LLDD_ACIB32.752e-2043.64L-lactate dehydrogenase [cytochrome] OS=Acinetobac... [more]
LLDD_PSEU23.595e-2043.64L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
YKN3_SCHPO4.695e-2047.32Uncharacterized lactate 2-monooxygenase PB1A11.03 ... [more]
LLDD_XANCP4.695e-2043.33L-lactate dehydrogenase [cytochrome] OS=Xanthomona... [more]
LLDD_XANCB4.695e-2043.33L-lactate dehydrogenase [cytochrome] OS=Xanthomona... [more]

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Properties
Property NameValue
Genbank description804 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 950 5, mRNA sequence.