GO242156

Overview
NameGO242156
Unique NameGO242156
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD1_MYCTU (Putative L-lactate dehydrogenase [cytochrome] 1 OS=Mycobacterium tuberculosis GN=lldD1 PE=3 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 1.510e-18
Identity = 48/104 (46.15%), Postives = 67/104 (64.42%), Query Frame = 1
Query:    4 AGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEIT 315
            + I VSNHG   LD  PA+I AL  V  A   ++ V LDGG+RRG+DV KA+ALGA  + IGR  ++ LAA G+ GV  VL++LRG  + A+   G  S+ +++
Sbjct:  271 SAISVSNHGGNNLDGTPASIRALPAVSAAVGDQVEVLLDGGIRRGSDVVKAVALGARAVMIGRAYLWGLAANGQAGVENVLDILRGGIDSALMGLGHASVHDLS 374          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_PSEFS (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas fluorescens (strain SBW25) GN=lldD PE=3 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 1.972e-18
Identity = 47/110 (42.73%), Postives = 67/110 (60.91%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHIV 330
            A GI+VSNHG RQLD V +T  AL  +  A    + V +D G+R G DV + LALGA    +GR   Y+LAA+G+ GV  +L++   E  +AM L+G  S+++I    +V
Sbjct:  267 ADGIVVSNHGGRQLDGVLSTAKALPPIADAVGDDLTVLVDSGIRSGLDVVRMLALGAKACLLGRASAYALAADGQNGVENLLDIFAKEMRVAMTLTGVTSIEQIDHTTLV 376          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_HAEIG (L-lactate dehydrogenase [cytochrome] OS=Haemophilus influenzae (strain PittGG) GN=lldD PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.576e-18
Identity = 45/110 (40.91%), Postives = 68/110 (61.82%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHIV 330
            A GI+VSNHG RQLD V ++  AL  +  A +G I +  D G+R G D+ + LALGA    +GR  VY+L A G +GV  +L++ + E  +AM L+  R++ +I  + +V
Sbjct:  267 ADGIVVSNHGGRQLDGVLSSARALPPIADAVKGDIKIIADSGIRNGLDIVRMLALGADATMLGRAFVYALGAAGRQGVENMLDIFKKEMHVAMTLTSNRTIADIKPEALV 376          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_HAEIE (L-lactate dehydrogenase [cytochrome] OS=Haemophilus influenzae (strain PittEE) GN=lldD PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.576e-18
Identity = 45/110 (40.91%), Postives = 68/110 (61.82%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHIV 330
            A GI+VSNHG RQLD V ++  AL  +  A +G I +  D G+R G D+ + LALGA    +GR  VY+L A G +GV  +L++ + E  +AM L+  R++ +I  + +V
Sbjct:  267 ADGIVVSNHGGRQLDGVLSSARALPPIADAVKGDIKIIADSGIRNGLDIVRMLALGADATMLGRAFVYALGAAGRQGVENMLDIFKKEMRVAMTLTSNRTIADIKPEALV 376          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_HAEI8 (L-lactate dehydrogenase [cytochrome] OS=Haemophilus influenzae (strain 86-028NP) GN=lldD PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.365e-18
Identity = 45/110 (40.91%), Postives = 68/110 (61.82%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHIV 330
            A GI+VSNHG RQLD V ++  AL  +  A +G I +  D G+R G D+ + LALGA    +GR  VY+L A G +GV  +L++ + E  +AM L+  R++ +I  + +V
Sbjct:  267 ADGIVVSNHGGRQLDGVLSSARALPPIADAVKGDIKIIADSGIRNGLDIVRMLALGADATMLGRAFVYALGAAGRQGVENMLDIFKKEMRVAMTLTSNRTIVDIKPEALV 376          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LA2M_MYCSM (Lactate 2-monooxygenase OS=Mycobacterium smegmatis PE=1 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 3.365e-18
Identity = 51/105 (48.57%), Postives = 63/105 (60.00%), Query Frame = 1
Query:    7 GIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRD 321
            GI  SNHG RQ +     +  L EVVKA+ G  PV  D G+R G DV KALA+GAS + IGRP  +  A  G KG+  V   L  E +L MA+ G R+LKE+T D
Sbjct:  285 GIYCSNHGGRQANGGLPALDCLPEVVKAS-GDTPVLFDSGIRTGADVVKALAMGASAVGIGRPYAWGAALGGSKGIEHVARSLLAEADLIMAVDGYRNLKELTID 388          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD2_MYCTU (Putative L-lactate dehydrogenase [cytochrome] 2 OS=Mycobacterium tuberculosis GN=lldD2 PE=3 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 3.849e-14
Identity = 41/107 (38.32%), Postives = 57/107 (53.27%), Query Frame = 1
Query:    7 GIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHI 327
            GI++SNHG RQLD  P     L  V +       + +D G+  G D+  A+ALGA    IGR  +Y L A GE GV R +E+L+      M L G   L+E++  H+
Sbjct:  295 GIVLSNHGGRQLDRAPVPFHLLPHVARELGKHTEILVDTGIMSGADIVAAIALGARCTLIGRAYLYGLMAGGEAGVNRAIEILQTGVIRTMRLLGVTCLEELSPRHV 401          
The following BLAST results are available for this feature:
BLAST of GO242156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
LLDD1_MYCTU1.510e-1846.15Putative L-lactate dehydrogenase [cytochrome] 1 OS... [more]
LLDD_PSEFS1.972e-1842.73L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_HAEIG2.576e-1840.91L-lactate dehydrogenase [cytochrome] OS=Haemophilu... [more]
LLDD_HAEIE2.576e-1840.91L-lactate dehydrogenase [cytochrome] OS=Haemophilu... [more]
LLDD_HAEI83.365e-1840.91L-lactate dehydrogenase [cytochrome] OS=Haemophilu... [more]
LA2M_MYCSM3.365e-1848.57Lactate 2-monooxygenase OS=Mycobacterium smegmatis... [more]
LLDD2_MYCTU3.849e-1438.32Putative L-lactate dehydrogenase [cytochrome] 2 OS... [more]

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Properties
Property NameValue
Genbank description804 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 950 5, mRNA sequence.