GO242156

Overview
NameGO242156
Unique NameGO242156
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_KLEP3 (L-lactate dehydrogenase [cytochrome] OS=Klebsiella pneumoniae (strain 342) GN=lldD PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.117e-21
Identity = 48/115 (41.74%), Postives = 76/115 (66.09%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHIVTEWDA 345
            A GI+VSNHG RQLD V ++  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  +Y+LA  G++GV  +L ++  E ++AM L+G ++++EI+RD +V   +A
Sbjct:  267 ADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDITILADSGIRNGLDVVRMIALGADSVLLGRAYLYALATHGKQGVANLLNLIEKEMKVAMTLTGAKTIREISRDSLVQNAEA 381          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_ECO81 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O81 (strain ED1a) GN=lldD PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.117e-21
Identity = 51/118 (43.22%), Postives = 74/118 (62.71%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHIVTEWDASLP 354
            A GI+VSNHG RQLD V ++  AL  +  A +G I +  D G+R G DV + +ALGA  I +GR  +Y+LA  G+ GV  +L ++  E ++AM L+G +S+ EIT+D +V      LP
Sbjct:  267 ADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTILLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLVQGLGKELP 384          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_SHISS (L-lactate dehydrogenase [cytochrome] OS=Shigella sonnei (strain Ss046) GN=lldD PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.459e-21
Identity = 50/118 (42.37%), Postives = 74/118 (62.71%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHIVTEWDASLP 354
            A GI+VSNHG RQLD V ++  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  +Y+LA  G+ GV  +L ++  E ++AM L+G +S+ EIT+D +V      LP
Sbjct:  267 ADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLVQGLGKELP 384          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_SHIFL (L-lactate dehydrogenase [cytochrome] OS=Shigella flexneri GN=lldD PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.459e-21
Identity = 50/118 (42.37%), Postives = 74/118 (62.71%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHIVTEWDASLP 354
            A GI+VSNHG RQLD V ++  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  +Y+LA  G+ GV  +L ++  E ++AM L+G +S+ EIT+D +V      LP
Sbjct:  267 ADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLVQGLGKELP 384          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_SHIF8 (L-lactate dehydrogenase [cytochrome] OS=Shigella flexneri serotype 5b (strain 8401) GN=lldD PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.459e-21
Identity = 50/118 (42.37%), Postives = 74/118 (62.71%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHIVTEWDASLP 354
            A GI+VSNHG RQLD V ++  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  +Y+LA  G+ GV  +L ++  E ++AM L+G +S+ EIT+D +V      LP
Sbjct:  267 ADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLVQGLGKELP 384          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_SHIDS (L-lactate dehydrogenase [cytochrome] OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=lldD PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.459e-21
Identity = 50/118 (42.37%), Postives = 74/118 (62.71%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHIVTEWDASLP 354
            A GI+VSNHG RQLD V ++  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  +Y+LA  G+ GV  +L ++  E ++AM L+G +S+ EIT+D +V      LP
Sbjct:  267 ADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSINEITQDSLVQGLGKELP 384          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_SHIBS (L-lactate dehydrogenase [cytochrome] OS=Shigella boydii serotype 4 (strain Sb227) GN=lldD PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.459e-21
Identity = 50/118 (42.37%), Postives = 74/118 (62.71%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHIVTEWDASLP 354
            A GI+VSNHG RQLD V ++  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  +Y+LA  G+ GV  +L ++  E ++AM L+G +S+ EIT+D +V      LP
Sbjct:  267 ADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLVQGLGKELP 384          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_SHIB3 (L-lactate dehydrogenase [cytochrome] OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=lldD PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.459e-21
Identity = 50/118 (42.37%), Postives = 74/118 (62.71%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHIVTEWDASLP 354
            A GI+VSNHG RQLD V ++  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  +Y+LA  G+ GV  +L ++  E ++AM L+G +S+ EIT+D +V      LP
Sbjct:  267 ADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLVQGLGKELP 384          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_PSEMY (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas mendocina (strain ymp) GN=lldD PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.459e-21
Identity = 50/112 (44.64%), Postives = 72/112 (64.29%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHIVTE 336
            A GIIVSNHG RQLD V ++  AL  +  A +G + +  D G+R G DV + LALGA  + +GR  +Y+LA  G+ GV  +L+++  E  +AM L+G +S+ EIT D +V E
Sbjct:  267 ADGIIVSNHGGRQLDGVLSSARALPAIADAVKGELKILADSGIRTGLDVVRMLALGADTVLLGRAFIYALAVAGQAGVSNLLDLIEKEMRVAMVLTGAKSIAEITSDLLVKE 378          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_ECOUT (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain UTI89 / UPEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.459e-21
Identity = 50/118 (42.37%), Postives = 74/118 (62.71%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHIVTEWDASLP 354
            A GI+VSNHG RQLD V ++  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  +Y+LA  G+ GV  +L ++  E ++AM L+G +S+ EIT+D +V      LP
Sbjct:  267 ADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLVQVLGKELP 384          
The following BLAST results are available for this feature:
BLAST of GO242156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
LLDD_KLEP31.117e-2141.74L-lactate dehydrogenase [cytochrome] OS=Klebsiella... [more]
LLDD_ECO811.117e-2143.22L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_SHISS1.459e-2142.37L-lactate dehydrogenase [cytochrome] OS=Shigella s... [more]
LLDD_SHIFL1.459e-2142.37L-lactate dehydrogenase [cytochrome] OS=Shigella f... [more]
LLDD_SHIF81.459e-2142.37L-lactate dehydrogenase [cytochrome] OS=Shigella f... [more]
LLDD_SHIDS1.459e-2142.37L-lactate dehydrogenase [cytochrome] OS=Shigella d... [more]
LLDD_SHIBS1.459e-2142.37L-lactate dehydrogenase [cytochrome] OS=Shigella b... [more]
LLDD_SHIB31.459e-2142.37L-lactate dehydrogenase [cytochrome] OS=Shigella b... [more]
LLDD_PSEMY1.459e-2144.64L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_ECOUT1.459e-2142.37L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]

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Properties
Property NameValue
Genbank description804 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 950 5, mRNA sequence.