GO242156

Overview
NameGO242156
Unique NameGO242156
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_ECOBW (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain K12 / BW2952) GN=lldD PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.459e-21
Identity = 50/118 (42.37%), Postives = 74/118 (62.71%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHIVTEWDASLP 354
            A GI+VSNHG RQLD V ++  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  +Y+LA  G+ GV  +L ++  E ++AM L+G +S+ EIT+D +V      LP
Sbjct:  267 ADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLVQGLGKELP 384          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_ECO8A (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O8 (strain IAI1) GN=lldD PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.459e-21
Identity = 50/118 (42.37%), Postives = 74/118 (62.71%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHIVTEWDASLP 354
            A GI+VSNHG RQLD V ++  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  +Y+LA  G+ GV  +L ++  E ++AM L+G +S+ EIT+D +V      LP
Sbjct:  267 ADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLVQGLGKELP 384          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_ECO7I (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.459e-21
Identity = 50/118 (42.37%), Postives = 74/118 (62.71%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHIVTEWDASLP 354
            A GI+VSNHG RQLD V ++  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  +Y+LA  G+ GV  +L ++  E ++AM L+G +S+ EIT+D +V      LP
Sbjct:  267 ADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLVQGLGKELP 384          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_ECO5E (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.459e-21
Identity = 50/118 (42.37%), Postives = 74/118 (62.71%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHIVTEWDASLP 354
            A GI+VSNHG RQLD V ++  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  +Y+LA  G+ GV  +L ++  E ++AM L+G +S+ EIT+D +V      LP
Sbjct:  267 ADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLVQGLGKELP 384          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_ECO57 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O157:H7 GN=lldD PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.459e-21
Identity = 50/118 (42.37%), Postives = 74/118 (62.71%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHIVTEWDASLP 354
            A GI+VSNHG RQLD V ++  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  +Y+LA  G+ GV  +L ++  E ++AM L+G +S+ EIT+D +V      LP
Sbjct:  267 ADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLVQGLGKELP 384          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_ECO55 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain 55989 / EAEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.459e-21
Identity = 50/118 (42.37%), Postives = 74/118 (62.71%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHIVTEWDASLP 354
            A GI+VSNHG RQLD V ++  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  +Y+LA  G+ GV  +L ++  E ++AM L+G +S+ EIT+D +V      LP
Sbjct:  267 ADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLVQGLGKELP 384          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_ECO45 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.459e-21
Identity = 50/118 (42.37%), Postives = 74/118 (62.71%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHIVTEWDASLP 354
            A GI+VSNHG RQLD V ++  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  +Y+LA  G+ GV  +L ++  E ++AM L+G +S+ EIT+D +V      LP
Sbjct:  267 ADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLVQVLGKELP 384          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_ECO27 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.459e-21
Identity = 50/118 (42.37%), Postives = 74/118 (62.71%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHIVTEWDASLP 354
            A GI+VSNHG RQLD V ++  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  +Y+LA  G+ GV  +L ++  E ++AM L+G +S+ EIT+D +V      LP
Sbjct:  267 ADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLVQGLGKELP 384          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_ECO24 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.459e-21
Identity = 50/118 (42.37%), Postives = 74/118 (62.71%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHIVTEWDASLP 354
            A GI+VSNHG RQLD V ++  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  +Y+LA  G+ GV  +L ++  E ++AM L+G +S+ EIT+D +V      LP
Sbjct:  267 ADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLVQGLGKELP 384          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_AGRVS (L-lactate dehydrogenase [cytochrome] OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=lldD PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.906e-21
Identity = 51/110 (46.36%), Postives = 71/110 (64.55%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHIV 330
            A GIIVSNHG RQLD V ++  AL  +  A +G + +  D G+R G DV + +A GA G+ IGR  VY+LAA G+ GV  +L++   E  +AM L+G RS+ EI+ D +V
Sbjct:  267 ADGIIVSNHGGRQLDGVLSSARALPAIAAAVKGDLTILADSGIRSGLDVVRMIAQGADGVLIGRAFVYALAAAGQAGVENLLDLFAKEMRVAMTLTGARSIAEISPDSLV 376          
The following BLAST results are available for this feature:
BLAST of GO242156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
LLDD_ECOBW1.459e-2142.37L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECO8A1.459e-2142.37L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECO7I1.459e-2142.37L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECO5E1.459e-2142.37L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECO571.459e-2142.37L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECO551.459e-2142.37L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECO451.459e-2142.37L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECO271.459e-2142.37L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECO241.459e-2142.37L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_AGRVS1.906e-2146.36L-lactate dehydrogenase [cytochrome] OS=Agrobacter... [more]

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Properties
Property NameValue
Genbank description804 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 950 5, mRNA sequence.