GO242156

Overview
NameGO242156
Unique NameGO242156
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_XANC5 (L-lactate dehydrogenase [cytochrome] OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=lldD PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.107e-20
Identity = 48/107 (44.86%), Postives = 68/107 (63.55%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRD 321
            A GI+VSNHG RQLD V ++  AL  +  A +G + +  D G+R G DV + LALGA  + +GR  VY+LAA G+ GV  +L ++  E  +AM L+G  S+ EI+ D
Sbjct:  267 ADGIVVSNHGGRQLDGVLSSARALPAIADAVKGELKILADSGIRSGLDVVRMLALGADAVLLGRAFVYALAAAGQAGVENLLTLIEKEMRVAMTLTGTHSIAEISAD 373          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_YERPY (L-lactate dehydrogenase [cytochrome] OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=lldD PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.752e-20
Identity = 48/109 (44.04%), Postives = 68/109 (62.39%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHI 327
            A GI+VSNHG RQLD V +T  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  VY+LA  GE GV  +L ++  E  +AM L+G + + +I RD +
Sbjct:  267 ADGIVVSNHGGRQLDGVLSTARALPAIADAVKGDITILADSGIRTGLDVVRMIALGADSVLLGRAFVYALATAGEAGVINLLTLIEQEMRVAMTLTGAKRIADINRDSL 375          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_YERPS (L-lactate dehydrogenase [cytochrome] OS=Yersinia pseudotuberculosis GN=lldD PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.752e-20
Identity = 48/109 (44.04%), Postives = 68/109 (62.39%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHI 327
            A GI+VSNHG RQLD V +T  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  VY+LA  GE GV  +L ++  E  +AM L+G + + +I RD +
Sbjct:  267 ADGIVVSNHGGRQLDGVLSTARALPAIADAVKGDITILADSGIRTGLDVVRMIALGADSVLLGRAFVYALATAGEAGVINLLTLIEQEMRVAMTLTGAKRIADINRDSL 375          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_YERPP (L-lactate dehydrogenase [cytochrome] OS=Yersinia pestis (strain Pestoides F) GN=lldD PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.752e-20
Identity = 48/109 (44.04%), Postives = 68/109 (62.39%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHI 327
            A GI+VSNHG RQLD V +T  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  VY+LA  GE GV  +L ++  E  +AM L+G + + +I RD +
Sbjct:  267 ADGIVVSNHGGRQLDGVLSTARALPAIADAVKGDITILADSGIRTGLDVVRMIALGADSVLLGRAFVYALATAGEAGVINLLTLIEQEMRVAMTLTGAKRIADINRDSL 375          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_YERPN (L-lactate dehydrogenase [cytochrome] OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=lldD PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.752e-20
Identity = 48/109 (44.04%), Postives = 68/109 (62.39%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHI 327
            A GI+VSNHG RQLD V +T  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  VY+LA  GE GV  +L ++  E  +AM L+G + + +I RD +
Sbjct:  267 ADGIVVSNHGGRQLDGVLSTARALPAIADAVKGDITILADSGIRTGLDVVRMIALGADSVLLGRAFVYALATAGEAGVINLLTLIEQEMRVAMTLTGAKRIADINRDSL 375          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_YERPG (L-lactate dehydrogenase [cytochrome] OS=Yersinia pestis bv. Antiqua (strain Angola) GN=lldD PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.752e-20
Identity = 48/109 (44.04%), Postives = 68/109 (62.39%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHI 327
            A GI+VSNHG RQLD V +T  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  VY+LA  GE GV  +L ++  E  +AM L+G + + +I RD +
Sbjct:  267 ADGIVVSNHGGRQLDGVLSTARALPAIADAVKGDITILADSGIRTGLDVVRMIALGADSVLLGRAFVYALATAGEAGVINLLTLIEQEMRVAMTLTGAKRIADINRDSL 375          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_YERPE (L-lactate dehydrogenase [cytochrome] OS=Yersinia pestis GN=lldD PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.752e-20
Identity = 48/109 (44.04%), Postives = 68/109 (62.39%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHI 327
            A GI+VSNHG RQLD V +T  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  VY+LA  GE GV  +L ++  E  +AM L+G + + +I RD +
Sbjct:  267 ADGIVVSNHGGRQLDGVLSTARALPAIADAVKGDITILADSGIRTGLDVVRMIALGADSVLLGRAFVYALATAGEAGVINLLTLIEQEMRVAMTLTGAKRIADINRDSL 375          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_YERPB (L-lactate dehydrogenase [cytochrome] OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=lldD PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.752e-20
Identity = 48/109 (44.04%), Postives = 68/109 (62.39%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHI 327
            A GI+VSNHG RQLD V +T  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  VY+LA  GE GV  +L ++  E  +AM L+G + + +I RD +
Sbjct:  267 ADGIVVSNHGGRQLDGVLSTARALPAIADAVKGDITILADSGIRTGLDVVRMIALGADSVLLGRAFVYALATAGEAGVINLLTLIEQEMRVAMTLTGAKRIADINRDSL 375          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_YERPA (L-lactate dehydrogenase [cytochrome] OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=lldD PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.752e-20
Identity = 48/109 (44.04%), Postives = 68/109 (62.39%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHI 327
            A GI+VSNHG RQLD V +T  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  VY+LA  GE GV  +L ++  E  +AM L+G + + +I RD +
Sbjct:  267 ADGIVVSNHGGRQLDGVLSTARALPAIADAVKGDITILADSGIRTGLDVVRMIALGADSVLLGRAFVYALATAGEAGVINLLTLIEQEMRVAMTLTGAKRIADINRDSL 375          
BLAST of GO242156 vs. ExPASy Swiss-Prot
Match: LLDD_YERP3 (L-lactate dehydrogenase [cytochrome] OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=lldD PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.752e-20
Identity = 48/109 (44.04%), Postives = 68/109 (62.39%), Query Frame = 1
Query:    1 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRGEFELAMALSGCRSLKEITRDHI 327
            A GI+VSNHG RQLD V +T  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  VY+LA  GE GV  +L ++  E  +AM L+G + + +I RD +
Sbjct:  267 ADGIVVSNHGGRQLDGVLSTARALPAIADAVKGDITILADSGIRTGLDVVRMIALGADSVLLGRAFVYALATAGEAGVINLLTLIEQEMRVAMTLTGAKRIADINRDSL 375          
The following BLAST results are available for this feature:
BLAST of GO242156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
LLDD_XANC52.107e-2044.86L-lactate dehydrogenase [cytochrome] OS=Xanthomona... [more]
LLDD_YERPY2.752e-2044.04L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPS2.752e-2044.04L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPP2.752e-2044.04L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPN2.752e-2044.04L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPG2.752e-2044.04L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPE2.752e-2044.04L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPB2.752e-2044.04L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPA2.752e-2044.04L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERP32.752e-2044.04L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]

Pages

back to top
Properties
Property NameValue
Genbank description804 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 950 5, mRNA sequence.