GO242080

Overview
NameGO242080
Unique NameGO242080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242080 vs. ExPASy Swiss-Prot
Match: G3PC_MESCR (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Mesembryanthemum crystallinum GN=GAPC PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.576e-33
Identity = 67/80 (83.75%), Postives = 76/80 (95.00%), Query Frame = 1
Query:    1 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKTQ 240
            ++IKAAIK ESEGKLKGILGYTEDD+VSTDF+GD+RSSIFDAKAGI+L+  FVKLVSWYDNEWGYSTRVVDLI+H+SK Q
Sbjct:  258 EQIKAAIKEESEGKLKGILGYTEDDLVSTDFIGDNRSSIFDAKAGISLNDNFVKLVSWYDNEWGYSTRVVDLIMHISKCQ 337          
BLAST of GO242080 vs. ExPASy Swiss-Prot
Match: G3PC_DIACA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Dianthus caryophyllus GN=GAPC PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.576e-33
Identity = 67/79 (84.81%), Postives = 74/79 (93.67%), Query Frame = 1
Query:    1 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKT 237
            +++KAAIK ESEGKLKGILGYTEDDVVSTDFVGD+RSSIFDAKAGIAL+  F+KLVSWYDNEWGYSTRVVDLI H+ KT
Sbjct:  258 EQVKAAIKEESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALNDNFIKLVSWYDNEWGYSTRVVDLIAHIHKT 336          
BLAST of GO242080 vs. ExPASy Swiss-Prot
Match: G3P_ATRNU (Glyceraldehyde-3-phosphate dehydrogenase OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 5.739e-33
Identity = 68/79 (86.08%), Postives = 74/79 (93.67%), Query Frame = 1
Query:    1 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKT 237
            ++IKAAIK ESEGK+KGILGYTEDDVVSTDFVGD+RSSIFDAKAGI L+  FVKLVSWYDNEWGYS+RVVDLI HMSKT
Sbjct:  258 EQIKAAIKEESEGKMKGILGYTEDDVVSTDFVGDNRSSIFDAKAGICLNGNFVKLVSWYDNEWGYSSRVVDLIRHMSKT 336          
BLAST of GO242080 vs. ExPASy Swiss-Prot
Match: G3PX_HORVU (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Hordeum vulgare GN=GAPC PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.848e-32
Identity = 67/80 (83.75%), Postives = 73/80 (91.25%), Query Frame = 1
Query:    1 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKTQ 240
            D+IK AIKA SEGKLKGI+GY E+D+VSTDFVGDSRSSIFDAKAGIAL+  FVKLVSWYDNEWGYS RVVDLI HM+KTQ
Sbjct:  258 DDIKKAIKAASEGKLKGIMGYVEEDLVSTDFVGDSRSSIFDAKAGIALNDHFVKLVSWYDNEWGYSNRVVDLIRHMAKTQ 337          
BLAST of GO242080 vs. ExPASy Swiss-Prot
Match: G3PE_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 3 OS=Zea mays GN=GAPC3 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 6.346e-32
Identity = 66/80 (82.50%), Postives = 73/80 (91.25%), Query Frame = 1
Query:    1 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKTQ 240
            DEIKAA+KAE+EG LKGILGY E+D+VSTDF GDSRSSIFDAKAGIAL+  FVKLVSWYDNEWGYSTRVVDLI HM+ T+
Sbjct:  258 DEIKAAVKAEAEGSLKGILGYVEEDLVSTDFQGDSRSSIFDAKAGIALNGNFVKLVSWYDNEWGYSTRVVDLIRHMNSTK 337          
BLAST of GO242080 vs. ExPASy Swiss-Prot
Match: G3PC_MAGLI (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Magnolia liliiflora GN=GAPC PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 6.346e-32
Identity = 67/82 (81.71%), Postives = 76/82 (92.68%), Query Frame = 1
Query:    1 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVD--LIVHMSKTQ 240
            +EIKA IKAESEGKLKGILGYTE+DVVSTDF+GD+RSSIFDAKAGIAL++ FVKLVSWYDNEWGYS+RV+D  LIVHM+  Q
Sbjct:  260 EEIKAVIKAESEGKLKGILGYTEEDVVSTDFIGDNRSSIFDAKAGIALNEHFVKLVSWYDNEWGYSSRVIDLILIVHMASCQ 341          
BLAST of GO242080 vs. ExPASy Swiss-Prot
Match: G3PC_PETHY (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Petunia hybrida GN=GAPC PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.414e-31
Identity = 67/80 (83.75%), Postives = 73/80 (91.25%), Query Frame = 1
Query:    1 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKTQ 240
            DEIKAAIK ESEGKLKGI G+TEDDVVSTDF+GD+RSSIFDAKAGIALSK FVKLVSWYDNE GYSTRVVDLI H++  +
Sbjct:  258 DEIKAAIKEESEGKLKGIPGHTEDDVVSTDFIGDNRSSIFDAKAGIALSKNFVKLVSWYDNEMGYSTRVVDLIKHIASVE 337          
BLAST of GO242080 vs. ExPASy Swiss-Prot
Match: G3PC_ORYSJ (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Oryza sativa subsp. japonica GN=GAPC PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.846e-31
Identity = 64/80 (80.00%), Postives = 73/80 (91.25%), Query Frame = 1
Query:    1 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKTQ 240
            D IK+AIK+ SEGKLKGI+GY E+D+VSTDFVGDSRSSIFDAKAGIAL+  FVKLV+WYDNEWGYS RV+DLI HM+KTQ
Sbjct:  258 DAIKSAIKSASEGKLKGIIGYVEEDLVSTDFVGDSRSSIFDAKAGIALNDNFVKLVAWYDNEWGYSNRVIDLIRHMAKTQ 337          
BLAST of GO242080 vs. ExPASy Swiss-Prot
Match: G3PC_ORYSI (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Oryza sativa subsp. indica GN=GAPC PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.846e-31
Identity = 64/80 (80.00%), Postives = 73/80 (91.25%), Query Frame = 1
Query:    1 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKTQ 240
            D IK+AIK+ SEGKLKGI+GY E+D+VSTDFVGDSRSSIFDAKAGIAL+  FVKLV+WYDNEWGYS RV+DLI HM+KTQ
Sbjct:  258 DAIKSAIKSASEGKLKGIIGYVEEDLVSTDFVGDSRSSIFDAKAGIALNDNFVKLVAWYDNEWGYSNRVIDLIRHMAKTQ 337          
BLAST of GO242080 vs. ExPASy Swiss-Prot
Match: G3PC_PETCR (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Petroselinum crispum GN=GAPC PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.113e-31
Identity = 66/77 (85.71%), Postives = 70/77 (90.91%), Query Frame = 1
Query:    1 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMS 231
            DEIKAAIK ESE  LKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIAL+  FVK+VSWYDNEWGYS RV+DLI HM+
Sbjct:  257 DEIKAAIKHESETSLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALNGNFVKVVSWYDNEWGYSNRVIDLIRHMA 333          
The following BLAST results are available for this feature:
BLAST of GO242080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 216
Match NameE-valueIdentityDescription
G3PC_MESCR2.576e-3383.75Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_DIACA2.576e-3384.81Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_ATRNU5.739e-3386.08Glyceraldehyde-3-phosphate dehydrogenase OS=Atripl... [more]
G3PX_HORVU2.848e-3283.75Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PE_MAIZE6.346e-3282.50Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_MAGLI6.346e-3281.71Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_PETHY1.414e-3183.75Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_ORYSJ1.846e-3180.00Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_ORYSI1.846e-3180.00Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_PETCR4.113e-3185.71Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]

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Properties
Property NameValue
Genbank description728 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 873 5, mRNA sequence.