GO242080

Overview
NameGO242080
Unique NameGO242080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242080 vs. ExPASy Swiss-Prot
Match: G3P_BUCBP (Glyceraldehyde-3-phosphate dehydrogenase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=gapA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.588e-17
Identity = 41/72 (56.94%), Postives = 57/72 (79.17%), Query Frame = 1
Query:    1 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDL 216
            ++I   IK  S   +K ++GYTED VVS+DF G++ +SIFDAKAG++L+  F+KLVSWYDNE GYS++V+DL
Sbjct:  254 EDICQIIKYASNHDMKEVIGYTEDHVVSSDFNGNTLTSIFDAKAGLSLNNNFIKLVSWYDNECGYSSKVLDL 325          
BLAST of GO242080 vs. ExPASy Swiss-Prot
Match: G3PG_LEIME (Glyceraldehyde-3-phosphate dehydrogenase, glycosomal OS=Leishmania mexicana GN=GAPG PE=1 SV=3)

HSP 1 Score: 88.5817 bits (218), Expect = 2.588e-17
Identity = 41/80 (51.25%), Postives = 60/80 (75.00%), Query Frame = 1
Query:    4 EIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKA----GIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMS 231
            EI  AIK  ++  +KGILG+T++++VS DF+ D+RSS++D+KA     +   K+F K+VSWYDNEW YS RVVDL+ +M+
Sbjct:  273 EIDKAIKKAAQTYMKGILGFTDEELVSADFINDNRSSVYDSKATLQNNLPGEKRFFKVVSWYDNEWAYSHRVVDLVRYMA 352          
BLAST of GO242080 vs. ExPASy Swiss-Prot
Match: G3P1_GIALA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Giardia lamblia GN=GAP1 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.380e-17
Identity = 41/72 (56.94%), Postives = 57/72 (79.17%), Query Frame = 1
Query:    1 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDL 216
            DEI A IK  SE +LKGI+ YT +DVVS+DF+  + +  FD+KAGI L+ +FVKLV+WYDNE+GY+ ++V+L
Sbjct:  256 DEICAEIKRGSENELKGIMTYTNEDVVSSDFLSTTSTCNFDSKAGIMLNSRFVKLVAWYDNEFGYANKLVEL 327          
BLAST of GO242080 vs. ExPASy Swiss-Prot
Match: G3P_CHLTR (Glyceraldehyde-3-phosphate dehydrogenase OS=Chlamydia trachomatis GN=gap PE=3 SV=3)

HSP 1 Score: 86.2705 bits (212), Expect = 1.285e-16
Identity = 39/78 (50.00%), Postives = 59/78 (75.64%), Query Frame = 1
Query:    1 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 234
            + I  A+K  +   +K I+ YTE+ VVS+DF+G   SS+FDA+AG+AL+ +F KLV+WYDNE GY+TR+VDL+ ++ +
Sbjct:  254 EAICEAVKHAANTSMKNIMYYTEEAVVSSDFIGCEYSSVFDAQAGVALNDRFFKLVAWYDNEIGYATRIVDLLEYVQE 331          
BLAST of GO242080 vs. ExPASy Swiss-Prot
Match: G3P_THEAQ (Glyceraldehyde-3-phosphate dehydrogenase OS=Thermus aquaticus GN=gap PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 1.678e-16
Identity = 42/73 (57.53%), Postives = 52/73 (71.23%), Query Frame = 1
Query:    1 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLI 219
            +E+ AA+KA +EG LKGIL YTED++V  D V D  SSI DAK   AL    VK+ +WYDNEWGY+ RV DL+
Sbjct:  252 EEVNAALKAAAEGPLKGILAYTEDEIVLQDIVMDPHSSIVDAKLTKALG-NMVKVFAWYDNEWGYANRVADLV 323          
BLAST of GO242080 vs. ExPASy Swiss-Prot
Match: G3P1_BACSU (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Bacillus subtilis GN=gapA PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 2.862e-16
Identity = 39/78 (50.00%), Postives = 56/78 (71.79%), Query Frame = 1
Query:    1 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 234
            +E+ AA+K  +EG LKGILGY+E+ +VS D+ G+  SS  DA + + +    VK++SWYDNE GYS RVVDL  +++K
Sbjct:  255 EEVNAALKEAAEGDLKGILGYSEEPLVSGDYNGNKNSSTIDALSTMVMEGSMVKVISWYDNESGYSNRVVDLAAYIAK 332          
BLAST of GO242080 vs. ExPASy Swiss-Prot
Match: G3P1_BACCE (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Bacillus cereus GN=gap1 PE=1 SV=3)

HSP 1 Score: 85.1149 bits (209), Expect = 2.862e-16
Identity = 40/77 (51.95%), Postives = 56/77 (72.73%), Query Frame = 1
Query:    1 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMS 231
            +E+ AA KA +EG+LKGILGY+E+ +VS D+ G + SS  DA + + +    VK++SWYDNE GYS RVVDL  +M+
Sbjct:  254 EEVNAAFKAAAEGELKGILGYSEEPLVSIDYNGCTASSTIDALSTMVMEGNMVKVLSWYDNETGYSNRVVDLAAYMT 330          
BLAST of GO242080 vs. ExPASy Swiss-Prot
Match: G3P_BACST (Glyceraldehyde-3-phosphate dehydrogenase OS=Bacillus stearothermophilus GN=gap PE=1 SV=5)

HSP 1 Score: 84.7297 bits (208), Expect = 3.738e-16
Identity = 40/77 (51.95%), Postives = 57/77 (74.03%), Query Frame = 1
Query:    1 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMS 231
            +E+ AA+KA +EG+LKGIL Y+E+ +VS D+ G + SS  DA + + +  K VK+VSWYDNE GYS RVVDL  +++
Sbjct:  255 EEVNAALKAAAEGELKGILAYSEEPLVSRDYNGSTVSSTIDALSTMVIDGKMVKVVSWYDNETGYSHRVVDLAAYIA 331          
BLAST of GO242080 vs. ExPASy Swiss-Prot
Match: G3P_CHLMU (Glyceraldehyde-3-phosphate dehydrogenase OS=Chlamydia muridarum GN=gap PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.881e-16
Identity = 36/71 (50.70%), Postives = 56/71 (78.87%), Query Frame = 1
Query:   16 AIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHM 228
            A+K  +   ++ I+ YTE+ VVS+DF+G   SS+FDA+AG+AL+ +F KL++WYDNE GY+TR+VDL+ ++
Sbjct:  260 AVKHAASTSMRNIMHYTEEAVVSSDFIGCEYSSVFDAQAGVALNDRFFKLIAWYDNEIGYATRIVDLLEYI 330          
BLAST of GO242080 vs. ExPASy Swiss-Prot
Match: G3P_MYCTU (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycobacterium tuberculosis GN=gap PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.375e-16
Identity = 42/79 (53.16%), Postives = 55/79 (69.62%), Query Frame = 1
Query:    1 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKT 237
            DEI AA KA +EG+LKGIL Y +  +VS+D V D  SSIFD+     +  +  K+VSWYDNEWGYS R+VDL+  + K+
Sbjct:  261 DEINAAFKAAAEGRLKGILKYYDAPIVSSDIVTDPHSSIFDSGLTKVIDDQ-AKVVSWYDNEWGYSNRLVDLVTLVGKS 338          
The following BLAST results are available for this feature:
BLAST of GO242080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 216
Match NameE-valueIdentityDescription
G3P_BUCBP2.588e-1756.94Glyceraldehyde-3-phosphate dehydrogenase OS=Buchne... [more]
G3PG_LEIME2.588e-1751.25Glyceraldehyde-3-phosphate dehydrogenase, glycosom... [more]
G3P1_GIALA3.380e-1756.94Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Giar... [more]
G3P_CHLTR1.285e-1650.00Glyceraldehyde-3-phosphate dehydrogenase OS=Chlamy... [more]
G3P_THEAQ1.678e-1657.53Glyceraldehyde-3-phosphate dehydrogenase OS=Thermu... [more]
G3P1_BACSU2.862e-1650.00Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Baci... [more]
G3P1_BACCE2.862e-1651.95Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Baci... [more]
G3P_BACST3.738e-1651.95Glyceraldehyde-3-phosphate dehydrogenase OS=Bacill... [more]
G3P_CHLMU4.881e-1650.70Glyceraldehyde-3-phosphate dehydrogenase OS=Chlamy... [more]
G3P_MYCTU6.375e-1653.16Glyceraldehyde-3-phosphate dehydrogenase OS=Mycoba... [more]

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Properties
Property NameValue
Genbank description728 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 873 5, mRNA sequence.