GO242080

Overview
NameGO242080
Unique NameGO242080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242080 vs. ExPASy Swiss-Prot
Match: G3P2_SYNY3 (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Synechocystis sp. (strain PCC 6803) GN=gap2 PE=1 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 4.276e-12
Identity = 32/78 (41.03%), Postives = 49/78 (62.82%), Query Frame = 1
Query:    1 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 234
            +++   +K  +   LKG+L YT+ ++VS+DF G   SS  D    + +    VK+++WYDNEWGYS RVVDL   ++K
Sbjct:  257 EQVNGVLKEAANTSLKGVLEYTDLELVSSDFRGTDCSSTVDGSLTMVMGGDMVKVIAWYDNEWGYSQRVVDLAEIVAK 334          
BLAST of GO242080 vs. ExPASy Swiss-Prot
Match: G3PB_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPB PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 9.527e-12
Identity = 31/72 (43.06%), Postives = 46/72 (63.89%), Query Frame = 1
Query:    1 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDL 216
            +++ AA +  ++G LKG+L   ++ +VS DF     SS  D+   + +    VK+V+WYDNEWGYS RVVDL
Sbjct:  312 EDVNAAFRKAADGPLKGVLAVCDEPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDL 383          
BLAST of GO242080 vs. ExPASy Swiss-Prot
Match: G3P_AQUAE (Glyceraldehyde-3-phosphate dehydrogenase OS=Aquifex aeolicus GN=gap PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.244e-11
Identity = 36/77 (46.75%), Postives = 50/77 (64.94%), Query Frame = 1
Query:   10 KAAIKAESEGK--LKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 234
            +AA K    GK  LK IL Y ED +VSTD VG+  S+IFDA     +    V + +WYDNEWGYS R+ DL++++++
Sbjct:  264 EAAQKYRESGKVYLKEILQYCEDPIVSTDIVGNPHSAIFDAPLTQVIDN-LVHIAAWYDNEWGYSCRLRDLVIYLAE 339          
BLAST of GO242080 vs. ExPASy Swiss-Prot
Match: G3P_STRAE (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptomyces arenae GN=gap PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.625e-11
Identity = 35/72 (48.61%), Postives = 47/72 (65.28%), Query Frame = 1
Query:    1 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDL 216
            +E+K A  A + G  KG+L Y +  +VSTD VGD  +S+FDA        + VK+V WYDNEWGYS R++DL
Sbjct:  256 EEVKEAYAAAASGPYKGLLSYVDAPLVSTDIVGDP-ASLFDAGLTRVCGPQ-VKVVGWYDNEWGYSNRLIDL 325          
BLAST of GO242080 vs. ExPASy Swiss-Prot
Match: G3P_BACCO (Glyceraldehyde-3-phosphate dehydrogenase OS=Bacillus coagulans GN=gap PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.625e-11
Identity = 34/77 (44.16%), Postives = 52/77 (67.53%), Query Frame = 1
Query:    1 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMS 231
            +E+ AA+KA +EG+LKGIL Y+ + +V  ++ G + SS  D  + + +    VK+VSWYDNE GYS RVV L  +++
Sbjct:  256 EEVNAALKAIAEGELKGILAYSIEPLVIRNYNGSTVSSTIDILSTMVIDGAMVKVVSWYDNETGYSHRVVALAAYIN 332          
BLAST of GO242080 vs. ExPASy Swiss-Prot
Match: G3P_AMAMU (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Amanita muscaria GN=GPD PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.625e-11
Identity = 33/57 (57.89%), Postives = 44/57 (77.19%), Query Frame = 1
Query:    1 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVS 171
            DEIK A +  S+G LKGI+ YT++ VVSTDF+G + SSIFD+ AGI L+  FVKL++
Sbjct:  233 DEIKEAFREASKGSLKGIIEYTDEHVVSTDFIGHTASSIFDSLAGIQLNANFVKLIA 289          
BLAST of GO242080 vs. ExPASy Swiss-Prot
Match: G3PA_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPA PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.625e-11
Identity = 32/72 (44.44%), Postives = 46/72 (63.89%), Query Frame = 1
Query:    1 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDL 216
            +E+ AA +  ++ +LKGIL   ++ +VS DF     SS  DA   + +    VK+++WYDNEWGYS RVVDL
Sbjct:  312 EEVNAAFREAADKELKGILDVCDEPLVSVDFRCSDVSSTVDASLTMVMGDDMVKVIAWYDNEWGYSQRVVDL 383          
BLAST of GO242080 vs. ExPASy Swiss-Prot
Match: G3PA_SPIOL (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Spinacia oleracea GN=GAPA PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.625e-11
Identity = 31/72 (43.06%), Postives = 46/72 (63.89%), Query Frame = 1
Query:    1 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDL 216
            +E+ AA +  ++ +LKGIL   ++ +VS DF     SS  D+   + +    VK+++WYDNEWGYS RVVDL
Sbjct:  321 EEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDL 392          
BLAST of GO242080 vs. ExPASy Swiss-Prot
Match: G3PA_SINAL (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Sinapis alba GN=GAPA PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.625e-11
Identity = 32/72 (44.44%), Postives = 46/72 (63.89%), Query Frame = 1
Query:    1 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDL 216
            +E+ AA +  +E +LKGIL   ++ +VS DF     SS  D+   + +    VK+++WYDNEWGYS RVVDL
Sbjct:  153 EEVNAAFRDAAEKELKGILDVCDEPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDL 224          
BLAST of GO242080 vs. ExPASy Swiss-Prot
Match: G3PA_ARATH (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Arabidopsis thaliana GN=GAPA PE=1 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 2.772e-11
Identity = 31/72 (43.06%), Postives = 46/72 (63.89%), Query Frame = 1
Query:    1 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDL 216
            +E+ AA +  +E +LKGIL   ++ +VS DF     S+  D+   + +    VK+++WYDNEWGYS RVVDL
Sbjct:  316 EEVNAAFRDSAEKELKGILDVCDEPLVSVDFRCSDFSTTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDL 387          
The following BLAST results are available for this feature:
BLAST of GO242080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 216
Match NameE-valueIdentityDescription
G3P2_SYNY34.276e-1241.03Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Syne... [more]
G3PB_TOBAC9.527e-1243.06Glyceraldehyde-3-phosphate dehydrogenase B, chloro... [more]
G3P_AQUAE1.244e-1146.75Glyceraldehyde-3-phosphate dehydrogenase OS=Aquife... [more]
G3P_STRAE1.625e-1148.61Glyceraldehyde-3-phosphate dehydrogenase OS=Strept... [more]
G3P_BACCO1.625e-1144.16Glyceraldehyde-3-phosphate dehydrogenase OS=Bacill... [more]
G3P_AMAMU1.625e-1157.89Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3PA_TOBAC1.625e-1144.44Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PA_SPIOL1.625e-1143.06Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PA_SINAL1.625e-1144.44Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PA_ARATH2.772e-1143.06Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]

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Properties
Property NameValue
Genbank description728 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 873 5, mRNA sequence.