GO242080

Overview
NameGO242080
Unique NameGO242080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242080 vs. ExPASy Swiss-Prot
Match: G3P_COLLN (Glyceraldehyde-3-phosphate dehydrogenase OS=Colletotrichum lindemuthianum GN=GPDA PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.369e-26
Identity = 55/78 (70.51%), Postives = 65/78 (83.33%), Query Frame = 1
Query:    1 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 234
            DEIK AIK  +EG LKG+L YTEDD VSTD +G+  SSIFDAKAGI+L+  FVKLVSWYDNEWGYS RV+DL+ H++K
Sbjct:  255 DEIKQAIKEAAEGPLKGVLAYTEDDFVSTDMIGNPNSSIFDAKAGISLNNNFVKLVSWYDNEWGYSRRVLDLLAHVAK 332          
BLAST of GO242080 vs. ExPASy Swiss-Prot
Match: G3P1_KLUMA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluyveromyces marxianus GN=GAP1 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.788e-26
Identity = 56/77 (72.73%), Postives = 68/77 (88.31%), Query Frame = 1
Query:    1 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMS 231
            DEIKAA+K  SEGKLK ++GYTED VVS+DF+GD+ S+IFDA AGI LS KFVKLV+WYDNE+GYSTRVVDL+ H++
Sbjct:  253 DEIKAAVKKVSEGKLKDVVGYTEDAVVSSDFLGDTHSTIFDAAAGIQLSPKFVKLVAWYDNEYGYSTRVVDLVEHVA 329          
BLAST of GO242080 vs. ExPASy Swiss-Prot
Match: G3P2_RHIRA (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Rhizomucor racemosus GN=GPD2 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.336e-26
Identity = 57/78 (73.08%), Postives = 67/78 (85.90%), Query Frame = 1
Query:    1 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 234
            +EIKA IK  SE +LKGILGYT D VVSTDFVGD++SSIFDA AGIAL+ KFVKLVSWYDNE+GYS RV+DL+ + +K
Sbjct:  255 EEIKAVIKKASENELKGILGYTNDQVVSTDFVGDAQSSIFDAAAGIALNDKFVKLVSWYDNEFGYSNRVIDLLAYAAK 332          
BLAST of GO242080 vs. ExPASy Swiss-Prot
Match: G3P1_SHIFL (Glyceraldehyde-3-phosphate dehydrogenase A OS=Shigella flexneri GN=gapA PE=3 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 2.336e-26
Identity = 55/78 (70.51%), Postives = 69/78 (88.46%), Query Frame = 1
Query:    1 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 234
            ++IKAA+KA +EG++KG+LGYTEDDVVSTDF G+  +S+FDAKAGIAL+  FVKLVSWYDNE GYS +V+DLI H+SK
Sbjct:  254 EQIKAAVKAAAEGEMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETGYSNKVLDLIAHISK 331          
BLAST of GO242080 vs. ExPASy Swiss-Prot
Match: G3P1_SALTY (Glyceraldehyde-3-phosphate dehydrogenase OS=Salmonella typhimurium GN=gapA PE=3 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 2.336e-26
Identity = 55/78 (70.51%), Postives = 69/78 (88.46%), Query Frame = 1
Query:    1 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 234
            ++IKAA+KA +EG++KG+LGYTEDDVVSTDF G+  +S+FDAKAGIAL+  FVKLVSWYDNE GYS +V+DLI H+SK
Sbjct:  254 EQIKAAVKAAAEGEMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETGYSNKVLDLIAHISK 331          
BLAST of GO242080 vs. ExPASy Swiss-Prot
Match: G3P1_SALTI (Glyceraldehyde-3-phosphate dehydrogenase OS=Salmonella typhi GN=gapA PE=3 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 2.336e-26
Identity = 55/78 (70.51%), Postives = 69/78 (88.46%), Query Frame = 1
Query:    1 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 234
            ++IKAA+KA +EG++KG+LGYTEDDVVSTDF G+  +S+FDAKAGIAL+  FVKLVSWYDNE GYS +V+DLI H+SK
Sbjct:  254 EQIKAAVKAAAEGEMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETGYSNKVLDLIAHISK 331          
BLAST of GO242080 vs. ExPASy Swiss-Prot
Match: G3P1_ESCF3 (Glyceraldehyde-3-phosphate dehydrogenase A OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=gapA PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.336e-26
Identity = 55/78 (70.51%), Postives = 69/78 (88.46%), Query Frame = 1
Query:    1 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 234
            ++IKAA+KA +EG++KG+LGYTEDDVVSTDF G+  +S+FDAKAGIAL+  FVKLVSWYDNE GYS +V+DLI H+SK
Sbjct:  254 EQIKAAVKAAAEGEMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETGYSNKVLDLIAHISK 331          
BLAST of GO242080 vs. ExPASy Swiss-Prot
Match: G3P1_ECOLI (Glyceraldehyde-3-phosphate dehydrogenase A OS=Escherichia coli (strain K12) GN=gapA PE=1 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 2.336e-26
Identity = 55/78 (70.51%), Postives = 69/78 (88.46%), Query Frame = 1
Query:    1 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 234
            ++IKAA+KA +EG++KG+LGYTEDDVVSTDF G+  +S+FDAKAGIAL+  FVKLVSWYDNE GYS +V+DLI H+SK
Sbjct:  254 EQIKAAVKAAAEGEMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETGYSNKVLDLIAHISK 331          
BLAST of GO242080 vs. ExPASy Swiss-Prot
Match: G3P1_ECOL6 (Glyceraldehyde-3-phosphate dehydrogenase A OS=Escherichia coli O6 GN=gapA PE=3 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 2.336e-26
Identity = 55/78 (70.51%), Postives = 69/78 (88.46%), Query Frame = 1
Query:    1 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 234
            ++IKAA+KA +EG++KG+LGYTEDDVVSTDF G+  +S+FDAKAGIAL+  FVKLVSWYDNE GYS +V+DLI H+SK
Sbjct:  254 EQIKAAVKAAAEGEMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETGYSNKVLDLIAHISK 331          
BLAST of GO242080 vs. ExPASy Swiss-Prot
Match: G3P1_ECO57 (Glyceraldehyde-3-phosphate dehydrogenase A OS=Escherichia coli O157:H7 GN=gapA PE=3 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 2.336e-26
Identity = 55/78 (70.51%), Postives = 69/78 (88.46%), Query Frame = 1
Query:    1 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 234
            ++IKAA+KA +EG++KG+LGYTEDDVVSTDF G+  +S+FDAKAGIAL+  FVKLVSWYDNE GYS +V+DLI H+SK
Sbjct:  254 EQIKAAVKAAAEGEMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETGYSNKVLDLIAHISK 331          
The following BLAST results are available for this feature:
BLAST of GO242080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 216
Match NameE-valueIdentityDescription
G3P_COLLN1.369e-2670.51Glyceraldehyde-3-phosphate dehydrogenase OS=Collet... [more]
G3P1_KLUMA1.788e-2672.73Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluy... [more]
G3P2_RHIRA2.336e-2673.08Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Rhiz... [more]
G3P1_SHIFL2.336e-2670.51Glyceraldehyde-3-phosphate dehydrogenase A OS=Shig... [more]
G3P1_SALTY2.336e-2670.51Glyceraldehyde-3-phosphate dehydrogenase OS=Salmon... [more]
G3P1_SALTI2.336e-2670.51Glyceraldehyde-3-phosphate dehydrogenase OS=Salmon... [more]
G3P1_ESCF32.336e-2670.51Glyceraldehyde-3-phosphate dehydrogenase A OS=Esch... [more]
G3P1_ECOLI2.336e-2670.51Glyceraldehyde-3-phosphate dehydrogenase A OS=Esch... [more]
G3P1_ECOL62.336e-2670.51Glyceraldehyde-3-phosphate dehydrogenase A OS=Esch... [more]
G3P1_ECO572.336e-2670.51Glyceraldehyde-3-phosphate dehydrogenase A OS=Esch... [more]

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Properties
Property NameValue
Genbank description728 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 873 5, mRNA sequence.