GO242012
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GO242012 vs. ExPASy Swiss-Prot
Match: RL2_LISMC (50S ribosomal protein L2 OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=rplB PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 8.651e-24 Identity = 75/226 (33.19%), Postives = 117/226 (51.77%), Query Frame = 2 Query: 47 AQAQSLSPSKEMGRVIRAQRKGAGSVFKSHTHHRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGRRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 718 A+ + +P K + R ++ ++ G + K H G Q+R +DF + G VA I +DP R A +A + + +K IAA+G+ GQ +Y G +A + VGN L ++ IP G V+ N+E G G L R++G A ++ + ++L SG ++I + CRA IGQV + + KAG + ++ KR P VRG MNP +HPHGG Sbjct: 22 AEITTSTPEKSLLRPLK-KKAGRNNQGKLTVRHHGGGHKRQYRVIDFKRNKDGIPGRVATIEYDPNRSANIALINYADG-----EKRYIIAAKGLEVGQTIYSGAEADIKVGNALELKDIPVGTVIHNIEMKPGKGGQLVRSAGTSAQVL--GKEGKYVLIRLNSGEVRMILATCRATIGQVGNEQHELINIGKAGRS--RWMGKR---PTVRGSVMNPNDHPHGG 234
BLAST of GO242012 vs. ExPASy Swiss-Prot
Match: RL2_LISIN (50S ribosomal protein L2 OS=Listeria innocua GN=rplB PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 8.651e-24 Identity = 75/226 (33.19%), Postives = 117/226 (51.77%), Query Frame = 2 Query: 47 AQAQSLSPSKEMGRVIRAQRKGAGSVFKSHTHHRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGRRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 718 A+ + +P K + R ++ ++ G + K H G Q+R +DF + G VA I +DP R A +A + + +K IAA+G+ GQ +Y G +A + VGN L ++ IP G V+ N+E G G L R++G A ++ + ++L SG ++I + CRA IGQV + + KAG + ++ KR P VRG MNP +HPHGG Sbjct: 22 AEITTSTPEKSLLRPLK-KKAGRNNQGKLTVRHHGGGHKRQYRVIDFKRNKDGIPGRVATIEYDPNRSANIALINYADG-----EKRYIIAAKGLEVGQTIYSGAEADIKVGNALELKDIPVGTVIHNIEMKPGKGGQLVRSAGTSAQVL--GKEGKYVLIRLNSGEVRMILATCRATIGQVGNEQHELINIGKAGRS--RWMGKR---PTVRGSVMNPNDHPHGG 234
BLAST of GO242012 vs. ExPASy Swiss-Prot
Match: RL2_BUCBP (50S ribosomal protein L2 OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=rplB PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 8.651e-24 Identity = 73/224 (32.59%), Postives = 112/224 (50.00%), Query Frame = 2 Query: 59 SLSPSKEMGRVIRAQRKGAG--SVFKSHTHHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGRRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 718 SL K + +IR K G + + T H G + +R +DF + +V + +DP R + +A + + R +A++G+ G + G A + +GN LP+++IP G V+ NVE G G +AR++G Y +IS +N ++L SG + + S CRA IG+V + L KAG + R P VRG AMNPV+HPHGG Sbjct: 23 SLYKGKPISSLIRKNSKSGGRNNCGRITTRHIGGRHKRFYRIIDFKRNKDNIPAIVERLEYDPNRSSNIALILYSDGDR-----RYILASKGLMVGSKIVSGFNAEIKIGNALPMKNIPIGTVIHNVEIKPGKGGQIARSAGTYVQLISR--ENSYVTIRLRSGETRKLESKCRATIGEVGNSESMLRVLGKAGASRW-----RGIRPTVRGTAMNPVDHPHGG 234
BLAST of GO242012 vs. ExPASy Swiss-Prot
Match: RL2_WOLWR (50S ribosomal protein L2 OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=rplB PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.476e-23 Identity = 75/200 (37.50%), Postives = 107/200 (53.50%), Query Frame = 2 Query: 137 THHRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGRRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGG 718 T HR G ++R +DF +RN +G+V +I +DP R LA ++++ K +A +GM G V G A ++ GN L ++ IP G+ V NVE G+ +ARA+G YA I+ D ++L SG ++I S C+A IG V+ + L KAG R+ W P VRGVAMNPV+HPHGG Sbjct: 51 TRHRGGGHKKKYRVIDF-KRNRSGQGIVEKIEYDPNRSGFLALISYKED----DIKSYILAPQGMKPGDVVTAGNDADILPGNCLLLKHIPVGSFVHNVELKPGNGAAIARAAGCYAQIVGR--DGQYVLLRLRSGQIRLILSSCKATIGVVSNPDHKNRKLGKAG---------RSRWLGIRPTVRGVAMNPVDHPHGG 234
BLAST of GO242012 vs. ExPASy Swiss-Prot
Match: RL2_THETN (50S ribosomal protein L2 OS=Thermoanaerobacter tengcongensis GN=rplB PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.476e-23 Identity = 72/198 (36.36%), Postives = 103/198 (52.02%), Query Frame = 2 Query: 143 HRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGRRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGG 718 HR G ++R +DF + G VA I +DP R A +A + + +K IA G+ G V G+ + VGN LP+R+IP G +V N+E G G L RA+G A +++ + D +++PSG ++I + CRA IGQV+ + KAG R+ W P VRG AMNPV+HPHGG Sbjct: 53 HRGGGHKRRYRIIDFKRDKDGIPGKVAAIEYDPNRTAFIALIHYADG-----EKRYIIAPHGLKVGDIVESGENVDIKVGNALPLRNIPVGTIVHNIELIPGKGGQLVRAAGAAAQLMA--KEGDYVHIRMPSGEIRLINANCRATIGQVSNIDHENVKIGKAG---------RSRWLGIRPTVRGSAMNPVDHPHGG 234
BLAST of GO242012 vs. ExPASy Swiss-Prot
Match: RL2_MYCS5 (50S ribosomal protein L2 OS=Mycoplasma synoviae (strain 53) GN=rplB PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.476e-23 Identity = 74/219 (33.79%), Postives = 109/219 (49.77%), Query Frame = 2 Query: 68 PSKEMGRVIR--AQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGRRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 718 P+K + R+++ A R G + H H + +R +DF + VV I +DP R A + + + +K IA +G+ GQ V G+ A ++VGN LP+ +IPEG + N+E G LAR++G A I+ + + VKL SG + I + CRA +G V + + KAG H R P VRG MNPV+HPHGG Sbjct: 30 PTKSLLRILKNSAGRNNQGKITVRH-HGGRVKRFYRLVDFKRNKDNIPAVVKTIEYDPNRSANICLLAYADG-----EKRYIIAPKGIKVGQKVVSGEGADIIVGNSLPLSNIPEGTFIHNIEMQPGGGAKLARSAGTSAQILGKDDNGKYVVVKLKSGETRRILARCRATVGMVGNEEYSLVNVGKAGINRH-----RGIRPTVRGSVMNPVDHPHGG 237
BLAST of GO242012 vs. ExPASy Swiss-Prot
Match: RL2_ERWCT (50S ribosomal protein L2 OS=Erwinia carotovora subsp. atroseptica GN=rplB PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.476e-23 Identity = 66/185 (35.68%), Postives = 96/185 (51.89%), Query Frame = 2 Query: 164 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGRRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 718 +R +DF + VV + +DP R A +A V ++ ++ +A +G+ G + G A + GN LP+R+IP G+ V NVE G G LAR++G Y I++ D ++L SG + + S CRA +G+V + L KAG A R P VRG AMNPV+HPHGG Sbjct: 62 YRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLKAGDQIQSGVDAAIKAGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGSYVTLRLRSGEMRKVESDCRATLGEVGNAEHMLRVLGKAGAARW-----RGIRPTVRGTAMNPVDHPHGG 234
BLAST of GO242012 vs. ExPASy Swiss-Prot
Match: RL2_WOLTR (50S ribosomal protein L2 OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=rplB PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.927e-23 Identity = 77/213 (36.15%), Postives = 112/213 (52.58%), Query Frame = 2 Query: 92 IRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGRRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGG 718 I + KG G H+K ++R +DF +RN +GVV +I +DP R LA V+++ K +A +G+ G V G ++ GN LP++ IP G+ V VE G V+ARA+G YA ++ D + ++L SG +++ S C+A IG V+ R + L KAG R+ W P VRGVAMNPV+HPHGG Sbjct: 49 ITIRHKGGG--------HKK---KYRIIDF-KRNRNDQGVVEKIEYDPNRSGFLALVSYKCD----DTKSYILAPQGIKPGDIVMSGSGIDILPGNCLPLKGIPIGSFVHGVELKPGSGAVIARAAGCYAQVVGR--DGNYVLLRLRSGQVRLVLSSCKATIGVVSNPDRKNRKLGKAG---------RSRWLGVRPTVRGVAMNPVDHPHGG 234
BLAST of GO242012 vs. ExPASy Swiss-Prot
Match: RL2_WOLPP (50S ribosomal protein L2 OS=Wolbachia pipientis subsp. Culex pipiens (strain wPip) GN=rplB PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.927e-23 Identity = 75/200 (37.50%), Postives = 107/200 (53.50%), Query Frame = 2 Query: 137 THHRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGRRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGG 718 T HR G ++R +DF +RN +G+V +I +DP R LA ++++ K +A +GM G V G A ++ GN L ++ IP G+ V NVE G+ +ARA+G YA I+ D ++L SG ++I S C+A IG V+ + L KAG R+ W P VRGVAMNPV+HPHGG Sbjct: 51 TRHRGGGHKKKYRVIDF-KRNRSDQGIVEKIEYDPNRSGFLALISYKED----DTKSYILAPQGMKPGDVVTAGDDADILPGNCLLLKHIPVGSFVHNVELKPGNGAAIARAAGCYAQIVGR--DGQYVLLRLRSGQIRLILSSCKATIGVVSNLDHKNRKLGKAG---------RSRWLGIRPAVRGVAMNPVDHPHGG 234
BLAST of GO242012 vs. ExPASy Swiss-Prot
Match: RL2_WOLPM (50S ribosomal protein L2 OS=Wolbachia pipientis wMel GN=rplB PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.927e-23 Identity = 74/200 (37.00%), Postives = 107/200 (53.50%), Query Frame = 2 Query: 137 THHRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGRRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGG 718 T HR G ++R +DF +RN +G+V +I +DP R LA ++++ K +A +GM G V G A ++ GN L ++ IP G+ V NVE G+ +ARA+G YA I+ D ++L SG ++I S C+A IG V+ + L KAG R+ W P VRG+AMNPV+HPHGG Sbjct: 51 TRHRGGGHKKKYRVIDF-KRNRSGQGIVEKIEYDPNRSGFLALISYKED----DIKSYILAPQGMKPGDVVTAGNDADILPGNCLLLKHIPVGSFVHNVELKPGNGAAIARAAGCYAQIVGR--DGQYVLLRLRSGQIRLILSSCKATIGVVSNPDHKNRKLGKAG---------RSRWLGIRPTVRGIAMNPVDHPHGG 234 The following BLAST results are available for this feature:
BLAST of GO242012 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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