GO242012
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GO242012 vs. ExPASy Swiss-Prot
Match: RL2_SHEAM (50S ribosomal protein L2 OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=rplB PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.927e-23 Identity = 70/210 (33.33%), Postives = 107/210 (50.95%), Query Frame = 2 Query: 95 RAQRKGAGSVFKSHTHHRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGRRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 718 +++ G + + T H G +R +DF + G + + +DP R A +A V + ++ +AA+GM G V G A + VGN LP+R+IP G+VV VE G +AR++G Y +++ D + ++L SG + +P CRA +G+V + L KAG + R P VRGVAMNPV+HPHGG Sbjct: 37 KSKTGGRNNTGRITTRHVGGGHKQHYRLIDFKRNKDGIPGKIERLEYDPNRTANIALVLYADG-----ERRYILAAKGMQAGDKVVSGIDADIKVGNALPLRNIPVGSVVHAVEMKPGKGAQIARSAGAYVQVVAR--DGEYATLRLRSGEMRKVPVDCRATLGEVGNAEHMLRQLGKAG-----AKRWRGVRPTVRGVAMNPVDHPHGG 234
BLAST of GO242012 vs. ExPASy Swiss-Prot
Match: RL2_BORAP (50S ribosomal protein L2 OS=Borrelia afzelii (strain PKo) GN=rplB PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.927e-23 Identity = 74/210 (35.24%), Postives = 113/210 (53.81%), Query Frame = 2 Query: 92 IRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGY-LKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGRRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 718 I +R+G G H RK +R +DF R+ + + VA I +DP R A +A + ++ +K I+ + + G + G A + +GN LP+ +IP G V N+E +VG G L R++G YA+I++ D + VKL SG ++I C A IG++ + KAG + ++ +R PKVRGVAMNPV+HPHGG Sbjct: 50 ISIRRRGGG-------HKRK----YRLIDFNRRDKFSIPARVASIEYDPNRSANIALLVYKDG-----EKRYIISPKDIKVGDVLESGPNAPIKIGNALPLENIPIGRTVHNIELNVGKGGQLVRSAGGYAMILA--SDGNYVTVKLSSGEVRLIFKKCIATIGEIGNEDYVNVSIGKAGKS--RWLGRR---PKVRGVAMNPVDHPHGG 236
BLAST of GO242012 vs. ExPASy Swiss-Prot
Match: RL2_GEOSF (50S ribosomal protein L2 OS=Geobacter sp. (strain FRC-32) GN=rplB PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.517e-23 Identity = 75/232 (32.33%), Postives = 118/232 (50.86%), Query Frame = 2 Query: 35 HQPAAQAQSLSPSK-EMGRVIRAQRKGAGSVFKSHTHHRKGPA---QFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGRRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 718 HQ + + ++ S+ E V++ ++ G + F T G ++R +DF + VA + +DP R A +A + + +K IA + G V A + GN LP+RSIP G ++ N+E +G LAR++G +A +++ + +VKLPSG +++ C A IGQV + KAG + ++ KR PKVRGVAMNPV+HPHGG Sbjct: 15 HQTCSTFEEITTSQPERSLVVKLKKTGGRNNFGRITSRHIGGGHKQKYRIIDFRRDKRDIPAKVASVEYDPYRSARIALLNYADG-----EKRYIIAPLDLKVGDTVVASTSADIKPGNALPIRSIPLGTIIHNIELKIGKGAQLARSAGTFAQLMA--KEEKYAQVKLPSGEVRMVLMDCMATIGQVGNLDHENVSIGKAGRS--RWLGKR---PKVRGVAMNPVDHPHGG 234
BLAST of GO242012 vs. ExPASy Swiss-Prot
Match: RL2_SODGM (50S ribosomal protein L2 OS=Sodalis glossinidius (strain morsitans) GN=rplB PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 3.287e-23 Identity = 66/185 (35.68%), Postives = 97/185 (52.43%), Query Frame = 2 Query: 164 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGRRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 718 +R +DF + VV + +DP R A +A V ++ ++ +A +G+ G+ + G A + GN LP+R+IP G+ V NVE G G LAR++G Y I++ D ++L SG + I S CRA +G+V + L KAG + R P VRG AMNPV+HPHGG Sbjct: 62 YRLIDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLKAGEQIQSGVDAAIKAGNALPMRNIPVGSTVHNVEMKPGKGGQLARSAGAYVQIVAR--DGAYVTLRLRSGEMRKIQSECRATLGEVGNAEHMLRVLGKAGASRW-----RGIRPTVRGTAMNPVDHPHGG 234
BLAST of GO242012 vs. ExPASy Swiss-Prot
Match: RL2_PHOLL (50S ribosomal protein L2 OS=Photorhabdus luminescens subsp. laumondii GN=rplB PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 3.287e-23 Identity = 73/229 (31.88%), Postives = 109/229 (47.60%), Query Frame = 2 Query: 32 IHQPAAQAQSLSPSKEMGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGRRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 718 +H+ A L S + G R + H H +R +DF + VV + +DP R A +A V ++ ++ +A +G+ G + G A++ GN LP+R+IP G+ V NVE G G LAR++G Y I++ D ++L SG + + S CRA +G+V + L KAG + R P VRG AMNPV+HPHGG Sbjct: 24 LHKGKPYAPLLEKSSKTGGRNNNGRITTRHIGGGHKQH------YRLIDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLKAGDQIQSGVDASIKTGNALPMRNIPVGSTVHNVEMKPGKGGQLARSAGAYVQIVAR--DGSYVTLRLRSGEMRKVLSDCRATLGEVGNAEHMLRVLGKAGASRW-----RGIRPTVRGTAMNPVDHPHGG 234
BLAST of GO242012 vs. ExPASy Swiss-Prot
Match: RL2_OCEIH (50S ribosomal protein L2 OS=Oceanobacillus iheyensis GN=rplB PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 3.287e-23 Identity = 81/230 (35.22%), Postives = 117/230 (50.87%), Query Frame = 2 Query: 47 AQAQSLSPSKEMGRVIRAQRKGAGSVFKSHTHHRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGRRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGG 718 A+ + +P K + IR +R G + K H+ G Q+R +DF + G VA I +DP R A +A V + +K IA +G+ GQ + G+ A + +GN LP+ SIP G V+ N+E G G +AR++G A I+ + T V+L SG ++I + CRA IGQV E L++ G A R+ W P VRG MNP +HPHGG Sbjct: 22 AEITTDTPEKSLLSPIR-KRGGRNNQGKLTVRHQGGGHKRQYRIIDFKRDKDGIPGRVATIEYDPNRSANIALVHYADG-----EKRYIIAPKGIKVGQEIESGENADIKLGNALPLGSIPVGTVIHNIELKPGRGGQIARSAGAEAQILGR--EEKYTLVRLSSGEVRLILTTCRATIGQVG---NIEHELVRVGKA------GRSRWKGIRPTVRGSVMNPNDHPHGG 234
BLAST of GO242012 vs. ExPASy Swiss-Prot
Match: RK2_PINKO (50S ribosomal protein L2, chloroplastic OS=Pinus koraiensis GN=rpl2 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 3.287e-23 Identity = 71/210 (33.81%), Postives = 110/210 (52.38%), Query Frame = 2 Query: 89 VIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGRRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 718 +I A+ +G G H++ +R +DF ++ G + I +DP R A + +V +++ K + G+ G + G KA + +GNVLP+ ++P G + N+E +G G LARA+G A +I+ + T R LPSG ++I C A IGQV + KAG ++ KR+ +VRGVAMNPV+HPHGG Sbjct: 49 IITARHRGGG--------HKR---LYRQIDFRRDKEHISGEIVTIEYDPNRSAYICKVHYKNG-----DKMYILHPRGVMIGDTILSGPKAPISIGNVLPLTNMPLGTAIHNIEITLGKGGQLARAAGAVAELIAKEDRSATLR--LPSGEVRLISENCSATIGQVGNITANNRSFGKAG--AKRWLGKRS---EVRGVAMNPVDHPHGG 235
BLAST of GO242012 vs. ExPASy Swiss-Prot
Match: RK2_PICAB (50S ribosomal protein L2, chloroplastic OS=Picea abies GN=rpl2 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 3.287e-23 Identity = 75/223 (33.63%), Postives = 114/223 (51.12%), Query Frame = 2 Query: 62 LSPSKEM--GRVIRAQRKGAGSVFKSHTHHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGRRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 718 L P K++ G+ R G G + HR G + +R +DF ++ G + I +DP R A + +V +++ K + G+ G + G KA + +GN LP+ ++P G + N+E +G G LARA+G A +I+ + T R LPSG ++I C A IGQV + KAG ++ KR+ +VRGVAMNPV+HPHGG Sbjct: 27 LDPQKKLTSGQHHCGSRNGRGIIT---ARHRGGGHKRLYRQIDFRRDKEHISGKIVTIEYDPNRSAYICKVHYKNG-----DKMYILHPRGVMIGDTILSGPKAPISIGNALPLTNMPLGTAIHNIEITLGKGGQLARAAGAVAELIAKEDRSATLR--LPSGEVRLISENCSATIGQVGNITANNRSFGKAG--AKRWLGKRS---EVRGVAMNPVDHPHGG 234
BLAST of GO242012 vs. ExPASy Swiss-Prot
Match: RK2_CHAVU (50S ribosomal protein L2, chloroplastic OS=Chara vulgaris GN=rpl2 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 4.294e-23 Identity = 72/223 (32.29%), Postives = 113/223 (50.67%), Query Frame = 2 Query: 62 LSPSKEM--GRVIRAQRKGAGSVFKSHTHHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGRRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 718 L P K + G++ + R G + + HR G + +R +DF + + G+V I +DP R + + V + +K + G+ G + A++ VGN LP+ IP G + N+E G G L RA+G A +++ + T ++LPSG ++I C A IGQV + + KAG+ +++ KR PKVRG AMNPV+HPHGG Sbjct: 27 LKPEKSLTSGKMSKKGRNNQGIIT---SRHRGGGHKRLYRKIDFRRKKIGIYGIVKTIEYDPNRNSHICLVNYEDG-----EKRYILYPRGIKIGDTILSSMDASIFVGNTLPLTQIPLGTAIHNIELQPGKGGQLVRAAGTVAQVVA--KEGKWTSIRLPSGEVRLIYQKCLATIGQVGNPEFNNQSIGKAGS--KRWQGKR---PKVRGTAMNPVDHPHGG 234
BLAST of GO242012 vs. ExPASy Swiss-Prot
Match: RL2_SYNAS (50S ribosomal protein L2 OS=Syntrophus aciditrophicus (strain SB) GN=rplB PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 5.607e-23 Identity = 66/186 (35.48%), Postives = 102/186 (54.84%), Query Frame = 2 Query: 161 QFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGRRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 718 ++R +DF + G +A I +DP R A +A V++ +K IA + G+ + G++A + GN +P+R+IP G+++ N+E VG G L R++G Y +++ + +V+LPSG + I CRA IGQV + KAG ++ KR PKVRGV MNPV+HP GG Sbjct: 61 RYRFIDFKREKLDVPGKIASIEYDPNRSARIALVSYEDG-----EKRYIIAPAKVAVGEKIVSGERADIKAGNAMPLRNIPVGSLIHNIELKVGKGGQLIRSAGTYGQLMA--KEGSYAQVRLPSGEMRKIFIDCRATIGQVGNNEHENISVGKAGRT--RWAGKR---PKVRGVVMNPVDHPMGG 234 The following BLAST results are available for this feature:
BLAST of GO242012 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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