GO242012
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GO242012 vs. ExPASy Swiss-Prot
Match: RL2_SALDC (50S ribosomal protein L2 OS=Salmonella dublin (strain CT_02021853) GN=rplB PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 5.607e-23 Identity = 65/185 (35.14%), Postives = 96/185 (51.89%), Query Frame = 2 Query: 164 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGRRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 718 +R +DF + VV + +DP R A +A V ++ ++ +A +G+ G + G A + GN LP+R+IP G+ V NVE G G LAR++G Y I++ D ++L SG + + + CRA +G+V + L KAG A R P VRG AMNPV+HPHGG Sbjct: 62 YRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLKAGDQIQSGVDAAIKAGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARW-----RGVRPTVRGTAMNPVDHPHGG 234
BLAST of GO242012 vs. ExPASy Swiss-Prot
Match: RL2_SALCH (50S ribosomal protein L2 OS=Salmonella choleraesuis GN=rplB PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 5.607e-23 Identity = 65/185 (35.14%), Postives = 96/185 (51.89%), Query Frame = 2 Query: 164 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGRRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 718 +R +DF + VV + +DP R A +A V ++ ++ +A +G+ G + G A + GN LP+R+IP G+ V NVE G G LAR++G Y I++ D ++L SG + + + CRA +G+V + L KAG A R P VRG AMNPV+HPHGG Sbjct: 62 YRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLKAGDQIQSGVDAAIKAGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARW-----RGVRPTVRGTAMNPVDHPHGG 234
BLAST of GO242012 vs. ExPASy Swiss-Prot
Match: RL2_SALAR (50S ribosomal protein L2 OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=rplB PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 5.607e-23 Identity = 65/185 (35.14%), Postives = 96/185 (51.89%), Query Frame = 2 Query: 164 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGRRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 718 +R +DF + VV + +DP R A +A V ++ ++ +A +G+ G + G A + GN LP+R+IP G+ V NVE G G LAR++G Y I++ D ++L SG + + + CRA +G+V + L KAG A R P VRG AMNPV+HPHGG Sbjct: 62 YRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLKAGDQIQSGVDAAIKAGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARW-----RGVRPTVRGTAMNPVDHPHGG 234
BLAST of GO242012 vs. ExPASy Swiss-Prot
Match: RL2_SALA4 (50S ribosomal protein L2 OS=Salmonella agona (strain SL483) GN=rplB PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 5.607e-23 Identity = 65/185 (35.14%), Postives = 96/185 (51.89%), Query Frame = 2 Query: 164 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGRRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 718 +R +DF + VV + +DP R A +A V ++ ++ +A +G+ G + G A + GN LP+R+IP G+ V NVE G G LAR++G Y I++ D ++L SG + + + CRA +G+V + L KAG A R P VRG AMNPV+HPHGG Sbjct: 62 YRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLKAGDQIQSGVDAAIKAGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARW-----RGVRPTVRGTAMNPVDHPHGG 234
BLAST of GO242012 vs. ExPASy Swiss-Prot
Match: RL2_PELPD (50S ribosomal protein L2 OS=Pelobacter propionicus (strain DSM 2379) GN=rplB PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 5.607e-23 Identity = 76/232 (32.76%), Postives = 121/232 (52.16%), Query Frame = 2 Query: 35 HQPAAQAQSLSPSK-EMGRVIRAQRKGAGSVFKSHTHHRKGPA---QFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGRRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 718 HQ + + ++ S E +I+ ++ G + T +G ++R +DF + VA I +DP R A +A + + +K +A + G V G +A + GN LP+++IP G ++ NVE +G LAR++G +A +++ + ++VKLPSG +++ C A IGQV + L KAG A ++ KR PKVRGVAMNPV+HPHGG Sbjct: 15 HQTCSSFEEITTSTPEKSLLIKLKKSGGRNALGRVTSRHQGGGHKQKYRIIDFRRDKISIPAKVASIEYDPYRSARIALLHYVDG-----EKRYILAPLDLKVGDTVLSGPEADIKPGNALPLKAIPLGTIIHNVELKLGKGAQLARSAGTFAQLMA--KEGRYSQVKLPSGEVRMVLQDCYATIGQVGNVDHEKVSLGKAGRA--RWLGKR---PKVRGVAMNPVDHPHGG 234
BLAST of GO242012 vs. ExPASy Swiss-Prot
Match: RL2_KLEP7 (50S ribosomal protein L2 OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=rplB PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 5.607e-23 Identity = 65/185 (35.14%), Postives = 96/185 (51.89%), Query Frame = 2 Query: 164 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGRRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 718 +R +DF + VV + +DP R A +A V ++ ++ +A +G+ G + G A + GN LP+R+IP G+ V NVE G G LAR++G Y I++ D ++L SG + + + CRA +G+V + L KAG A R P VRG AMNPV+HPHGG Sbjct: 62 YRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLKAGDQIQSGVDAAIKAGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARW-----RGVRPTVRGTAMNPVDHPHGG 234
BLAST of GO242012 vs. ExPASy Swiss-Prot
Match: RL2_KLEP3 (50S ribosomal protein L2 OS=Klebsiella pneumoniae (strain 342) GN=rplB PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 5.607e-23 Identity = 65/185 (35.14%), Postives = 96/185 (51.89%), Query Frame = 2 Query: 164 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGRRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 718 +R +DF + VV + +DP R A +A V ++ ++ +A +G+ G + G A + GN LP+R+IP G+ V NVE G G LAR++G Y I++ D ++L SG + + + CRA +G+V + L KAG A R P VRG AMNPV+HPHGG Sbjct: 62 YRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLKAGDQIQSGVDAAIKAGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARW-----RGVRPTVRGTAMNPVDHPHGG 234
BLAST of GO242012 vs. ExPASy Swiss-Prot
Match: RL2_CLOCE (50S ribosomal protein L2 OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=rplB PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 5.607e-23 Identity = 66/198 (33.33%), Postives = 103/198 (52.02%), Query Frame = 2 Query: 140 HHRKGPAQ-FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGRRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGG 718 HH G Q +R +DF +K VA I +DP R A +A + + +K +A G+ G FV G+ + + GN LP+ +IP G+++ N+E G G + RA+G+ A +++ + + +++LPSG +++ CRA +GQ+ + KAG R W P VRGV MNPV+HPHGG Sbjct: 53 HHGGGNRQKYRVIDFKRDKDGIKAKVATIEYDPNRTANIALLNYADG-----EKRYILAPVGLKVGDFVESGESSDIRTGNALPLANIPVGSMIHNIELKPGKGGQMVRAAGNAAQLMA--KEGEYAQIRLPSGEVRMVRINCRATLGQIGNIEHENVKIGKAG---------RKRWMGVRPTVRGVVMNPVDHPHGG 234
BLAST of GO242012 vs. ExPASy Swiss-Prot
Match: RK2_PINTH (50S ribosomal protein L2, chloroplastic OS=Pinus thunbergii GN=rpl2 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 5.607e-23 Identity = 71/207 (34.30%), Postives = 107/207 (51.69%), Query Frame = 2 Query: 104 RKGAGSVFKSHTHHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGRRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 718 R G G + HR G + +R +DF ++ G + I +DP R A + +V +++ K + G+ G + G KA + +GN LP+ ++P G + N+E +G G LARA+G A +I+ + T R LPSG ++I C A IGQV + KAG ++ KR+ +VRGVAMNPV+HPHGG Sbjct: 44 RNGRGIIT---ARHRGGGHKRLYRQIDFRRNKEHISGEIVTIEYDPNRSAYICKVHYKNG-----DKMYILHPRGVMIGDTILSGPKAPISIGNALPLTNMPLGTAIHNIEITLGKGGQLARAAGAVAELIAKEDRSATLR--LPSGEVRLISENCSATIGQVGNITANNRSFGKAG--AKRWLGKRS---EVRGVAMNPVDHPHGG 235
BLAST of GO242012 vs. ExPASy Swiss-Prot
Match: RK2_CYCTA (50S ribosomal protein L2, chloroplastic OS=Cycas taitungensis GN=rpl2 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 5.607e-23 Identity = 72/220 (32.73%), Postives = 111/220 (50.45%), Query Frame = 2 Query: 65 SPSKEMGRVIRAQRKGAGSVFKSHTHHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGRRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 718 +P K++ KG S HR G + +R +DF Y+ G + I +DP R A + V + +K+ + G+ G + G +A + +GN LP+ +P G + ++E +G G LARA+G A +I+ + +T ++LPSG ++I C A IGQV L KAG+ ++ KR P+VRGV MNPV+HPHGG Sbjct: 28 NPQKKLTSGQHRCGKGRNSRGIITARHRGGGHKRLYRQIDFQRNEKYIFGEIVTIEYDPNRSAYICLVHYGDG-----EKKYILHPRGVIIGDTITSGPRAPISIGNALPLTDVPLGTAIHSIEITLGKGGQLARAAGAVAELIA--KEGRSTTLRLPSGEIRLISENCSATIGQVGNVNANNGTLGKAGS--KRWLGKR---PRVRGVVMNPVDHPHGG 235 The following BLAST results are available for this feature:
BLAST of GO242012 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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