GO241939

Overview
NameGO241939
Unique NameGO241939
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241939 vs. ExPASy Swiss-Prot
Match: TCMO_ZINEL (Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 7.403e-27
Identity = 57/74 (77.03%), Postives = 58/74 (78.38%), Query Frame = 3
Query:    3 ANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPR 224
            ANGNDFRYLPFGVGRRSCP              RLVQNFELLPPPGQ K+DT EKGGQFSLHILKHSTIVAKPR
Sbjct:  430 ANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQDKVDTTEKGGQFSLHILKHSTIVAKPR 503          
BLAST of GO241939 vs. ExPASy Swiss-Prot
Match: TCMO_PETCR (Trans-cinnamate 4-monooxygenase OS=Petroselinum crispum GN=CYP73A10 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.154e-26
Identity = 57/75 (76.00%), Postives = 59/75 (78.67%), Query Frame = 3
Query:    3 ANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRS 227
            ANGNDF+Y+PFGVGRRSCP              RLVQNFELLPPPGQSKIDTAEKGGQFSL ILKHSTIV KPRS
Sbjct:  431 ANGNDFKYIPFGVGRRSCPGIILALPILGIVIGRLVQNFELLPPPGQSKIDTAEKGGQFSLQILKHSTIVCKPRS 505          
BLAST of GO241939 vs. ExPASy Swiss-Prot
Match: TCMO_RUTGR (Trans-cinnamate 4-monooxygenase OS=Ruta graveolens GN=CYP73A2 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.382e-25
Identity = 55/75 (73.33%), Postives = 58/75 (77.33%), Query Frame = 3
Query:    3 ANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRS 227
            ANGNDFRY+PFGVGRRSCP              R+VQNFELLPPPGQSKIDT+EKGGQFSL IL HSTIV KPRS
Sbjct:  430 ANGNDFRYIPFGVGRRSCPGIILALPILGITIGRMVQNFELLPPPGQSKIDTSEKGGQFSLFILNHSTIVLKPRS 504          
BLAST of GO241939 vs. ExPASy Swiss-Prot
Match: TCMO_ARATH (Trans-cinnamate 4-monooxygenase OS=Arabidopsis thaliana GN=CYP73A5 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.062e-25
Identity = 53/75 (70.67%), Postives = 58/75 (77.33%), Query Frame = 3
Query:    3 ANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRS 227
            ANGNDFRY+PFGVGRRSCP              R+VQNFELLPPPGQSK+DT+EKGGQFSLHIL HS IV KPR+
Sbjct:  430 ANGNDFRYVPFGVGRRSCPGIILALPILGITIGRMVQNFELLPPPGQSKVDTSEKGGQFSLHILNHSIIVMKPRN 504          
The following BLAST results are available for this feature:
BLAST of GO241939 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
TCMO_ZINEL7.403e-2777.03Trans-cinnamate 4-monooxygenase OS=Zinnia elegans ... [more]
TCMO_PETCR2.154e-2676.00Trans-cinnamate 4-monooxygenase OS=Petroselinum cr... [more]
TCMO_RUTGR2.382e-2573.33Trans-cinnamate 4-monooxygenase OS=Ruta graveolens... [more]
TCMO_ARATH4.062e-2570.67Trans-cinnamate 4-monooxygenase OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank description587 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 729 5, mRNA sequence.