GO241928
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GO241928 vs. ExPASy Swiss-Prot
Match: AROE_HALLT (Shikimate dehydrogenase OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=aroE PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.723e-13 Identity = 50/122 (40.98%), Postives = 67/122 (54.92%), Query Frame = 2 Query: 116 GARVIIFNRNYERAKALADAVSGEALH-FEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFM 478 GA V + NR ERA LADAV G + L + +L NA+++GM+ + +PVP + L V DAVY P TRLLREAA GAT + G M + Q + F ++TG AP + M Sbjct: 146 GATVHVANRTAERAVDLADAVPGATGGGLDDLGDRIAGAD-VLVNATSVGMD-EPEATPVPADHLHGDLAVLDAVYAPIETRLLREAAAAGATTIDGAWMLLFQGVEAFEIWTGADAPVEAM 265
BLAST of GO241928 vs. ExPASy Swiss-Prot
Match: AROE_METKA (Shikimate dehydrogenase OS=Methanopyrus kandleri GN=aroE PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.315e-12 Identity = 49/138 (35.51%), Postives = 70/138 (50.72%), Query Frame = 2 Query: 125 VIIFNRNYERAKALAD-------------AVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSP-VPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 496 ++I NR +RA+ LA+ + G+ + E +L +A+ +GM PN D+ P V + + +V D VY P TRLL EA + GAT VSGV M + Q F L+TG AP + MR+ VLE Sbjct: 156 IVIANRTVDRAERLAEELKEKVGVKARAIGLDGDEIEREL------RDADLLVDATPVGMYPNEDEPPLVTADQMHEDLIVNDLVYNPPRTRLLEEAEKAGATPVSGVGMLVYQGALAFELWTGEEAPVEVMREAVLE 287
BLAST of GO241928 vs. ExPASy Swiss-Prot
Match: AROE_ARCFU (Shikimate dehydrogenase OS=Archaeoglobus fulgidus GN=aroE PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.645e-11 Identity = 44/129 (34.11%), Postives = 64/129 (49.61%), Query Frame = 2 Query: 116 GARVIIFNRNYERAKALADAVS--GEALHFEYLH-EFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVL 493 G+ VI+ NR E+ + + + GE + + E K ++ NA+ +GM + PVP L ELVFD VY P T L+REA + G VV G+EM + Q F ++TG MR+ L Sbjct: 136 GSTVIVANRTEEKGREAVEMLRRYGECIFWPLSRVEELKGKVDVVVNATPLGMRGFKAEIPVPPSMLDGVELVFDTVYNPMETPLIREAKKRGCKVVYGIEMLVHQGAKAFEIWTGIEPDVGVMREAAL 264
BLAST of GO241928 vs. ExPASy Swiss-Prot
Match: AROE_PYRAB (Shikimate dehydrogenase OS=Pyrococcus abyssi GN=aroE PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.149e-11 Identity = 46/131 (35.11%), Postives = 73/131 (55.73%), Query Frame = 2 Query: 110 SRGARVIIFNRNYERAKALAD-AVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 499 S+ A +++ NR +AK+L V G +L + + + +L NA+++GM N +S VP+ L+ +V D VY P TRLLR+A VG V+ G+ M I Q F+L+TG + MR++ LE+ Sbjct: 135 SKIANIVVLNRTPSKAKSLEKFGVKGGSLDELPNYVGWAD---VLINATSVGMGTN--ESLVPRRLLRRELIVMDIVYKPLKTRLLRDAESVGCRVIDGLWMLIYQGAESFKLWTGIYPDVELMRRVSLER 260
BLAST of GO241928 vs. ExPASy Swiss-Prot
Match: AROE_BACHD (Shikimate dehydrogenase OS=Bacillus halodurans GN=aroE PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.149e-11 Identity = 35/92 (38.04%), Postives = 51/92 (55.43%), Query Frame = 2 Query: 224 EKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 499 E+ ++ N +++GM P D P+ E L +V D +Y P T+ LREA + GA V G+ MF+ Q F L+TG + MR+ VLEQ Sbjct: 184 ERFSVIINTTSVGMSPRVDDMPLSLERLSRETVVSDLIYNPLETKFLREAKQKGAKTVDGLGMFVNQGALAFELWTGLRPDREKMRRCVLEQ 275
BLAST of GO241928 vs. ExPASy Swiss-Prot
Match: AROE_HALSA (Shikimate dehydrogenase OS=Halobacterium salinarium GN=aroE PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.806e-11 Identity = 49/122 (40.16%), Postives = 63/122 (51.64%), Query Frame = 2 Query: 116 GARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMR 481 GA V I NR A LA V G A+ L + +L +A+ +GM+ + D SPV +AL V DAVY+P TRLLR+AA GAT + G M + Q F +TG AP MR Sbjct: 140 GATVRIANRTRAAADELAADVGGTAVGLGDLPRSLAD-ATVLVHATTVGMD-DPDTSPVSADALHDDLAVLDAVYSPVETRLLRDAAAAGATTIDGAWMLLYQGAEAFERWTGLDAPVAAMR 259
BLAST of GO241928 vs. ExPASy Swiss-Prot
Match: AROE_HALS3 (Shikimate dehydrogenase OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=aroE PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.806e-11 Identity = 49/122 (40.16%), Postives = 63/122 (51.64%), Query Frame = 2 Query: 116 GARVIIFNRNYERAKALADAVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMR 481 GA V I NR A LA V G A+ L + +L +A+ +GM+ + D SPV +AL V DAVY+P TRLLR+AA GAT + G M + Q F +TG AP MR Sbjct: 140 GATVRIANRTRAAADELAADVGGTAVGLGDLPRSLAD-ATVLVHATTVGMD-DPDTSPVSADALHDDLAVLDAVYSPVETRLLRDAAAAGATTIDGAWMLLYQGAEAFERWTGLDAPVAAMR 259
BLAST of GO241928 vs. ExPASy Swiss-Prot
Match: AROE_NITMS (Shikimate dehydrogenase OS=Nitrosopumilus maritimus (strain SCM1) GN=aroE PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.787e-11 Identity = 42/137 (30.66%), Postives = 75/137 (54.74%), Query Frame = 2 Query: 107 KSRGARVIIFNRNYERAKALAD-----AVSGEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQF 502 K + + I NR E+A L + ++ A+ + + E + +I+ NA++IG++ ++ SP+ E + +V+D VY P NT L++A E AT++ G EM + QA+ F ++ G AP + M+K +L F Sbjct: 140 KEKAKSITIANRTIEKANNLVEFAKKISLDANAITIDQVGESAKDYNIIV-NATSIGLQ--NESSPISFEGVNEKTVVYDIVYLPMNTDFLKKAKEKNATIIFGYEMLLGQAVRAFEIWHGMEAPYNAMKKALLGGF 273
BLAST of GO241928 vs. ExPASy Swiss-Prot
Match: AROE_MOOTA (Shikimate dehydrogenase OS=Moorella thermoacetica (strain ATCC 39073) GN=aroE PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.252e-11 Identity = 39/131 (29.77%), Postives = 68/131 (51.91%), Query Frame = 2 Query: 125 VIIFNRNYERAKALADAVSGEALHFEYLHEFFP-------EKGMILANASAIGMEPNSDQSPVPKEALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLE 496 +++ NR ERA LA A++G L ++ E ++ N +++GM P +++P+P + + + V+D VY P T+ L A G V+SG++M + Q F L+TG AP M +++ E Sbjct: 152 LVLANRTPERATELAGALAGAGLPAPVVYRLGDAGMRSEVEAADLVLNTTSLGMWPRVEETPLPPDWFRPGQWVYDLVYNPLETKFLAGARRRGCRVISGLDMLLYQGAAAFTLWTGREAPVAVMDRVLRE 282
BLAST of GO241928 vs. ExPASy Swiss-Prot
Match: AROE_METJA (Shikimate dehydrogenase OS=Methanocaldococcus jannaschii GN=aroE PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.252e-11 Identity = 45/133 (33.83%), Postives = 72/133 (54.14%), Query Frame = 2 Query: 125 VIIFNRNYERAKALADAVS-------GEALHFEYLHEFFPEKGMILANASAIGMEPNSDQSPVPK-EALKAYELVFDAVYTPRNTRLLREAAEVGATVVSGVEMFIRQALGQFRLFTGGLAPEDFMRKLVLEQ 499 +II NR E+A+ALA ++ GE + F L +I+ NA+ IGM PN D P+ K E L+ +V D +Y P T LL+EA +V A ++G+ M I Q F+++TG + M+ ++++ Sbjct: 148 IIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIII-NATPIGMYPNIDVEPIVKAEKLREDMVVMDLIYNPLETVLLKEAKKVNAKTINGLGMLIYQGAVAFKIWTGVEPNIEVMKNAIIDK 279 The following BLAST results are available for this feature:
BLAST of GO241928 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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