GO241859

Overview
NameGO241859
Unique NameGO241859
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13405 contig Csv1_Contig13405:35..851. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241859 vs. ExPASy Swiss-Prot
Match: VATL2_NEUCR (V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Neurospora crassa GN=vma-11 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.208e-11
Identity = 49/157 (31.21%), Postives = 73/157 (46.50%), Query Frame = 1
Query:  127 KISPYTFSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEXXXXXXXXXXXXLQAKLESVPASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILAIEIFGSALGLFGVIVGIIMSAQA 597
            K +P+   A GIA A+     GAA+G   +G  + G     P +  K LI V+               +   L    + Q Y   SL  G+   A G+ VG   L  G C+GI+G     S    S +FV ++ I IFG  LGL+G+IV +I++ ++
Sbjct:   13 KFAPFIGMA-GIAAAMIFGSAGAAYGTAKSGIGIAGVGTFRPDLIMKCLIPVVMSGIIAVYALVVAVLIAQDLGPPGSGQHY---SLFNGFMHLACGLSVGLTGLAAGYCIGIVGDKGVRSFMLQSRIFVGMVLILIFGEVLGLYGLIVALILNTKS 165          
BLAST of GO241859 vs. ExPASy Swiss-Prot
Match: VATL2_CAEEL (V-type proton ATPase 16 kDa proteolipid subunit 2/3 OS=Caenorhabditis elegans GN=vha-2 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.208e-11
Identity = 45/147 (30.61%), Postives = 68/147 (46.26%), Query Frame = 1
Query:  145 FSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEXXXXXXXXXXXXLQAKLESVPASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILAIEIFGSALGLFGVIVGIIM 585
            F  +G A A   +VLGAA+G   +   +    +  P +  K++I VI               L+ K+ S  A        L  G+A  A+G+  G   L  G  +GI+G +     AQ   LFV ++ I IF   LGL+G+IV +I+
Sbjct:   17 FGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYGLVVAMVLKGKVTSASAGY-----DLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALIL 158          
BLAST of GO241859 vs. ExPASy Swiss-Prot
Match: VATL2_CAEBR (V-type proton ATPase 16 kDa proteolipid subunit 2/3 OS=Caenorhabditis briggsae GN=vha-2 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.208e-11
Identity = 44/147 (29.93%), Postives = 69/147 (46.94%), Query Frame = 1
Query:  145 FSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEXXXXXXXXXXXXLQAKLESVPASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILAIEIFGSALGLFGVIVGIIM 585
            F  +G A A   +VLGAA+G   +   +    +  P +  K++I VI               L+ K+++  A        L  G+A  A+G+  G   L  G  +GI+G +     AQ   LFV ++ I IF   LGL+G+IV +I+
Sbjct:   17 FGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYGLVVAMVLKGKVQAASAGY-----DLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALIL 158          
BLAST of GO241859 vs. ExPASy Swiss-Prot
Match: VATL_ASCSU (V-type proton ATPase 16 kDa proteolipid subunit OS=Ascaris suum GN=12 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.766e-11
Identity = 45/147 (30.61%), Postives = 69/147 (46.94%), Query Frame = 1
Query:  145 FSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEXXXXXXXXXXXXLQAKLESVPASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILAIEIFGSALGLFGVIVGIIM 585
            F  +G A A   +VLGAA+G   +   +    +  P +  K++I VI               L+ K+ S  A       +L  G+A  A+G+  G   L  G  +GI+G +     AQ   LFV ++ I IF   LGL+G+IV +I+
Sbjct:   17 FGYMGAASAQIFTVLGAAYGTAKSAVGISSMGVMRPELIMKSVIPVIMAGIIGIYGLVVAMVLRGKVTSASAGY-----TLDKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALIL 158          
BLAST of GO241859 vs. ExPASy Swiss-Prot
Match: VATL1_CAEEL (V-type proton ATPase 16 kDa proteolipid subunit 1 OS=Caenorhabditis elegans GN=vha-1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.766e-11
Identity = 40/149 (26.85%), Postives = 72/149 (48.32%), Query Frame = 1
Query:  145 FSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEXXXXXXXXXXXXLQAKLESVPASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILAIEIFGSALGLFGVIVGIIMSA 591
            F ++G+  A+  +  G+A+G    G+ +   A+  P +  K +I V+               +  K+E  PA   Y   ++   ++ FA G++ G   L  G  +GI G +   + +Q   +FV ++ I IF   LGL+G+IV +I+ A
Sbjct:   25 FGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIYGLVVAVIVSGKVE--PAGANY---TINNAFSQFAGGLVCGLCGLGAGYAIGIAGDAGVRALSQQPRMFVGMILILIFAEVLGLYGMIVALILGA 168          
BLAST of GO241859 vs. ExPASy Swiss-Prot
Match: VATL_SHEEP (V-type proton ATPase 16 kDa proteolipid subunit OS=Ovis aries GN=ATP6V0C PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.919e-11
Identity = 41/150 (27.33%), Postives = 72/150 (48.00%), Query Frame = 1
Query:  145 FSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEXXXXXXXXXXXXLQAKLESVPASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILAIEIFGSALGLFGVIVGIIMSAQ 594
            F+ +G + A+  S LGAA+G   +G+ +   ++  P +  K++I V+               +        A+ +    SL   +    +G+ VG + L  G  +GI+G +     AQ   LFV ++ I IF   LGL+G+IV +I+S +
Sbjct:   14 FAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEMIMKSIIPVVMAGIIAIYGLVVAVLI--------ANSLNDGISLYRSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALILSTK 155          
BLAST of GO241859 vs. ExPASy Swiss-Prot
Match: VATL_BOVIN (V-type proton ATPase 16 kDa proteolipid subunit OS=Bos taurus GN=ATP6V0C PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.919e-11
Identity = 41/150 (27.33%), Postives = 72/150 (48.00%), Query Frame = 1
Query:  145 FSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEXXXXXXXXXXXXLQAKLESVPASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILAIEIFGSALGLFGVIVGIIMSAQ 594
            F+ +G + A+  S LGAA+G   +G+ +   ++  P +  K++I V+               +        A+ +    SL   +    +G+ VG + L  G  +GI+G +     AQ   LFV ++ I IF   LGL+G+IV +I+S +
Sbjct:   14 FAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEMIMKSIIPVVMAGIIAIYGLVVAVLI--------ANSLNDGISLYRSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALILSTK 155          
The following BLAST results are available for this feature:
BLAST of GO241859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
VATL2_NEUCR2.208e-1131.21V-type proton ATPase 16 kDa proteolipid subunit 2 ... [more]
VATL2_CAEEL2.208e-1130.61V-type proton ATPase 16 kDa proteolipid subunit 2/... [more]
VATL2_CAEBR2.208e-1129.93V-type proton ATPase 16 kDa proteolipid subunit 2/... [more]
VATL_ASCSU3.766e-1130.61V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL1_CAEEL3.766e-1126.85V-type proton ATPase 16 kDa proteolipid subunit 1 ... [more]
VATL_SHEEP4.919e-1127.33V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_BOVIN4.919e-1127.33V-type proton ATPase 16 kDa proteolipid subunit OS... [more]

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Properties
Property NameValue
Genbank description507 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 644 5, mRNA sequence.