GO241856

Overview
NameGO241856
Unique NameGO241856
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241856 vs. ExPASy Swiss-Prot
Match: ARL8B_PONAB (ADP-ribosylation factor-like protein 8B OS=Pongo abelii GN=ARL8B PE=2 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 1.404e-67
Identity = 117/183 (63.93%), Postives = 150/183 (81.97%), Query Frame = 3
Query:  186 MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITDREVCCFMISCKNSTNIDSVIDWLVKHSKSK 734
            + L    L+W RSLF+K+EMEL+L+GLQ +GKT+ VNV+A+G +SEDMIPTVGFNMRKVTKGNVTIK+WD+GGQPRFRSMWERYCR V+AIVY++DAA  + +  SR+ELH+LL+KP L GIP+LVLGNK D P AL ++ L ++M L +I DRE+CC+ ISCK   NID  + WL++HSKS+
Sbjct:    2 LALISRLLDWFRSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAAYREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLIQHSKSR 184          
BLAST of GO241856 vs. ExPASy Swiss-Prot
Match: ARL8B_MACFA (ADP-ribosylation factor-like protein 8B OS=Macaca fascicularis GN=ARL8B PE=2 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 1.404e-67
Identity = 116/183 (63.39%), Postives = 151/183 (82.51%), Query Frame = 3
Query:  186 MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITDREVCCFMISCKNSTNIDSVIDWLVKHSKSK 734
            + L    L+W RSLF+K+EMEL+L+GLQ +GKT+ VNV+A+G +SEDMIPTVGFNMRKVTKGNVTIK+WD+GGQPR+RSMWERYCR V+AIVY++DAAD + +  SR+ELH+LL+KP L GIP+LVLGNK D P AL ++ L ++M L +I DRE+CC+ ISCK   NID  + WL+++SKS+
Sbjct:    2 LALISRLLDWFRSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRYRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLIQYSKSR 184          
BLAST of GO241856 vs. ExPASy Swiss-Prot
Match: ARL8_DICDI (ADP-ribosylation factor-like protein 8 OS=Dictyostelium discoideum GN=arl8 PE=3 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 1.360e-62
Identity = 110/182 (60.44%), Postives = 141/182 (77.47%), Query Frame = 3
Query:  186 MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITDREVCCFMISCKNSTNIDSVIDWLVKHSKS 731
            M  +E+ +N+ +SLF+KQEMEL+L+GLQ +GKT+LVNV++ GG+ ED IPT+GFNM+KVTKGNVTIKLWD+GGQPRFRSMWERYCR V+AIV+VVD+AD +    S+  L DL+NKP L+ IPLLV+ NK D P +     +   + L+ I  REVCC+ IS KNS NID  +DWL+KHS S
Sbjct:    1 MNFFESIINFFKSLFWKQEMELTLVGLQGSGKTTLVNVISNGGFIEDTIPTIGFNMKKVTKGNVTIKLWDIGGQPRFRSMWERYCRGVNAIVFVVDSADREKFEQSKQALQDLINKPPLAKIPLLVVANKNDLPNSAGVDEMIQNLDLRGIVGREVCCYSISAKNSVNIDITLDWLIKHSSS 182          
BLAST of GO241856 vs. ExPASy Swiss-Prot
Match: ARL1_CAEEL (ADP-ribosylation factor-like protein 1 OS=Caenorhabditis elegans GN=arl-1 PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 3.165e-27
Identity = 64/176 (36.36%), Postives = 97/176 (55.11%), Query Frame = 3
Query:  207 LNWLRSLFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITDREVCCFMISCKNSTNIDSVIDWLVKHSKSK 734
            +++ R LF  +EM + ++GL  AGKT+++  +  G      IPT+GFN+ +V   N+  ++WDLGGQ   R  W  Y     AI+YVVD+AD D + ISR EL  +L +  L G  L VL NK D  G L++  +   +GL ++ +R +  F  S      +D  +DWL    + K
Sbjct:    5 MSYFRGLFGAREMRILILGLDGAGKTTILYRLQVGEVVTT-IPTIGFNVEQVEYKNLKFQVWDLGGQTSIRPYWRCYYANTDAIIYVVDSADRDRVGISRQELATMLQEDELQGAVLAVLANKQDIAGCLTETEVYKALGLDALRNRTIQIFKTSASKGEGLDPAMDWLANQLQQK 179          
BLAST of GO241856 vs. ExPASy Swiss-Prot
Match: ARL1_HUMAN (ADP-ribosylation factor-like protein 1 OS=Homo sapiens GN=ARL1 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.203e-26
Identity = 64/177 (36.16%), Postives = 99/177 (55.93%), Query Frame = 3
Query:  204 FLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITDREVCCFMISCKNSTNIDSVIDWLVKHSKSK 734
            F +   SLF  +EM + ++GL  AGKT+++  +  G      IPT+GFN+  VT  N+  ++WDLGGQ   R  W  Y     A++YVVD+ D D + IS+SEL  +L +  L    L+V  NK D   A++   + + +GL ++ DR+   F  S    T +D  ++WLV+  KS+
Sbjct:    5 FSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTT-IPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR 180          
BLAST of GO241856 vs. ExPASy Swiss-Prot
Match: ARL1_BOVIN (ADP-ribosylation factor-like protein 1 OS=Bos taurus GN=ARL1 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.571e-26
Identity = 64/177 (36.16%), Postives = 99/177 (55.93%), Query Frame = 3
Query:  204 FLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITDREVCCFMISCKNSTNIDSVIDWLVKHSKSK 734
            F +   SLF  +EM + ++GL  AGKT+++  +  G      IPT+GFN+  VT  N+  ++WDLGGQ   R  W  Y     A++YVVD+ D D + IS+SEL  +L +  L    L+V  NK D   A++   + + +GL ++ DR+   F  S    T +D  ++WLV+  KS+
Sbjct:    5 FSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTT-IPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTPSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR 180          
BLAST of GO241856 vs. ExPASy Swiss-Prot
Match: ARL1_RAT (ADP-ribosylation factor-like protein 1 OS=Rattus norvegicus GN=Arl1 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 2.052e-26
Identity = 64/177 (36.16%), Postives = 99/177 (55.93%), Query Frame = 3
Query:  204 FLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITDREVCCFMISCKNSTNIDSVIDWLVKHSKSK 734
            F +   SLF  +EM + ++GL  AGKT+++  +  G      IPT+GFN+  VT  N+  ++WDLGGQ   R  W  Y     A++YVVD+ D D + IS+SEL  +L +  L    L+V  NK D   A++   + + +GL ++ DR+   F  S    T +D  ++WLV+  KS+
Sbjct:    5 FSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTT-IPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTPSEMANALGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR 180          
BLAST of GO241856 vs. ExPASy Swiss-Prot
Match: ARL1_MOUSE (ADP-ribosylation factor-like protein 1 OS=Mus musculus GN=Arl1 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 2.052e-26
Identity = 64/177 (36.16%), Postives = 99/177 (55.93%), Query Frame = 3
Query:  204 FLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITDREVCCFMISCKNSTNIDSVIDWLVKHSKSK 734
            F +   SLF  +EM + ++GL  AGKT+++  +  G      IPT+GFN+  VT  N+  ++WDLGGQ   R  W  Y     A++YVVD+ D D + IS+SEL  +L +  L    L+V  NK D   A++   + + +GL ++ DR+   F  S    T +D  ++WLV+  KS+
Sbjct:    5 FSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTT-IPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTPSEMANALGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR 180          
BLAST of GO241856 vs. ExPASy Swiss-Prot
Match: ARL1_DROME (ADP-ribosylation factor-like protein 1 OS=Drosophila melanogaster GN=Arf72A PE=1 SV=5)

HSP 1 Score: 119.783 bits (299), Expect = 2.679e-26
Identity = 63/176 (35.80%), Postives = 99/176 (56.25%), Query Frame = 3
Query:  207 LNWLRSLFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITDREVCCFMISCKNSTNIDSVIDWLVKHSKSK 734
            L++ R L   +EM + ++GL  AGKT+++  +  G      IPT+GFN+ +VT  N+  ++WDLGGQ   R  W  Y     AI+YVVD+AD D + IS+ EL  +L +  L+G  L+VL NK D  G ++   +   +GL+++ +R    F  S      +D  +DWL    +S+
Sbjct:    5 LSYFRGLLGSREMRILILGLDGAGKTTILYRLQVGEVVTT-IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQDMDGCMTVAEVHHALGLENLKNRTFQIFKTSATKGEGLDQAMDWLSNTLQSR 179          
BLAST of GO241856 vs. ExPASy Swiss-Prot
Match: ARF1_SALBA (ADP-ribosylation factor 1 OS=Salix bakko GN=ARF1 PE=2 SV=3)

HSP 1 Score: 119.013 bits (297), Expect = 4.570e-26
Identity = 64/184 (34.78%), Postives = 101/184 (54.89%), Query Frame = 3
Query:  186 MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITDREVCCFMISCKNSTNIDSVIDWLVKHSKSKS 737
            MGL  +F   L  LF K+EM + ++GL  AGKT+++  +  G      IPT+GFN+  V   N++  +WD+GGQ + R +W  Y +    +++VVD+ D D +  +R ELH +LN+  L    LLV  NK D P A++   +TD++GL S+  R          +   +   +DWL  +  SK+
Sbjct:    1 MGL--SFTKLLGRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVGEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNISSKA 181          
The following BLAST results are available for this feature:
BLAST of GO241856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
ARL8B_PONAB1.404e-6763.93ADP-ribosylation factor-like protein 8B OS=Pongo a... [more]
ARL8B_MACFA1.404e-6763.39ADP-ribosylation factor-like protein 8B OS=Macaca ... [more]
ARL8_DICDI1.360e-6260.44ADP-ribosylation factor-like protein 8 OS=Dictyost... [more]
ARL1_CAEEL3.165e-2736.36ADP-ribosylation factor-like protein 1 OS=Caenorha... [more]
ARL1_HUMAN1.203e-2636.16ADP-ribosylation factor-like protein 1 OS=Homo sap... [more]
ARL1_BOVIN1.571e-2636.16ADP-ribosylation factor-like protein 1 OS=Bos taur... [more]
ARL1_RAT2.052e-2636.16ADP-ribosylation factor-like protein 1 OS=Rattus n... [more]
ARL1_MOUSE2.052e-2636.16ADP-ribosylation factor-like protein 1 OS=Mus musc... [more]
ARL1_DROME2.679e-2635.80ADP-ribosylation factor-like protein 1 OS=Drosophi... [more]
ARF1_SALBA4.570e-2634.78ADP-ribosylation factor 1 OS=Salix bakko GN=ARF1 P... [more]

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Properties
Property NameValue
Genbank description504 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 641 5, mRNA sequence.